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The map label for this gene is trbB [H]

Identifier: 162148522

GI number: 162148522

Start: 2837854

End: 2838783

Strand: Reverse

Name: trbB [H]

Synonym: GDI_2745

Alternate gene names: 162148522

Gene position: 2838783-2837854 (Counterclockwise)

Preceding gene: 162148523

Following gene: 162148521

Centisome position: 71.97

GC content: 64.09

Gene sequence:

>930_bases
ATGCTGCGCACGGCGATGGGACCGGCGATTGCGGGGCATCTTGCCGATTCCGCTGTGGTCGAGGTGATGCTCAATCCCGA
CGGGCGGCTGTGGATCGACCGTCTGGCGGACGGCATGGCGGACACGGGTGAAACCATCACACCGGCCGATGCCGAGCGCA
TCGTGCGCCTGGTCGCCCATCATGTCGGGGCGGAGGTGCATGAGGCCGCACCACGCGTCTCGGCGGAACTGCCAACCGGT
GAGCGCTTCGAGGGGCTGTTGCCGCCTGTGGTGACGGCCCCGAGCTTCGCGATCCGCAAGCCCGCCGTCGCCGTGTTCAC
CCTCGACGACTATGTCGAGACCGGGATCATGACCGCAAAGCAGGCGGCATATCTTCGCAACGCTGTCGCAGAGCGAAAGA
ATATCCTGGTCGCGGGCGGCACGTCGACCGGCAAGACCACATTGGTCAATGCCCTGCTGGCCGAGGTGGCCAAAACCGGT
GATCGCGTCGTCCTGATCGAGGATACGCGCGAACTGCAATGCACGGCGCCTAATCTCATAGCCCTGCGGACCCGTGAAGG
CGTGATTACCCTTTCGGATCTCGTCCGGTCCGGTCTCCGCCTACGCCCCGACCGTATTCCGATCGGTGAGGTGCGTGGTG
CCGAAGCACTCGATCTGGTCAAGGCATGGGGCACTGGCCATCCGGGCGGCATCGGTACGCTGCATGCCGGATCGGTGCTG
GCTGCCCTGTATCGTCTGGAACAACTGATCCAGGAAGCCGTGGTCACGGTGCCGCGCGCCATGATCGCGGAAACCATTGA
CGTGATCGCGGTCCTGTCCGGACGCGGCAATGCCCGCCGGCTGTCCGAACTCGCCACCGTGGACGGGATTGATCCCGCCA
TAGGTATCTATCGCATTCATCCAGTACATGCCAACGGAGATTCTCGATGA

Upstream 100 bases:

>100_bases
ATCCCCGTCGTCGTCCGGAGAGGTCGGATGACCTGGCCGGACGGGGATTTCCATGACGGTTACACCAATTGAAAATGGTG
CCCGACAGCGCGGTATTTCT

Downstream 100 bases:

>100_bases
CCCGCGCTCTCTTTCGCGTGCGCCAGCACGCGCCTGTCATTGCCGCCATGCTGCTGCTTTCGGTTGCATGGTGCTCCTCG
GCCCTGGCGTCCGGGTCGGA

Product: type II/IV secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLRTAMGPAIAGHLADSAVVEVMLNPDGRLWIDRLADGMADTGETITPADAERIVRLVAHHVGAEVHEAAPRVSAELPTG
ERFEGLLPPVVTAPSFAIRKPAVAVFTLDDYVETGIMTAKQAAYLRNAVAERKNILVAGGTSTGKTTLVNALLAEVAKTG
DRVVLIEDTRELQCTAPNLIALRTREGVITLSDLVRSGLRLRPDRIPIGEVRGAEALDLVKAWGTGHPGGIGTLHAGSVL
AALYRLEQLIQEAVVTVPRAMIAETIDVIAVLSGRGNARRLSELATVDGIDPAIGIYRIHPVHANGDSR

Sequences:

>Translated_309_residues
MLRTAMGPAIAGHLADSAVVEVMLNPDGRLWIDRLADGMADTGETITPADAERIVRLVAHHVGAEVHEAAPRVSAELPTG
ERFEGLLPPVVTAPSFAIRKPAVAVFTLDDYVETGIMTAKQAAYLRNAVAERKNILVAGGTSTGKTTLVNALLAEVAKTG
DRVVLIEDTRELQCTAPNLIALRTREGVITLSDLVRSGLRLRPDRIPIGEVRGAEALDLVKAWGTGHPGGIGTLHAGSVL
AALYRLEQLIQEAVVTVPRAMIAETIDVIAVLSGRGNARRLSELATVDGIDPAIGIYRIHPVHANGDSR
>Mature_309_residues
MLRTAMGPAIAGHLADSAVVEVMLNPDGRLWIDRLADGMADTGETITPADAERIVRLVAHHVGAEVHEAAPRVSAELPTG
ERFEGLLPPVVTAPSFAIRKPAVAVFTLDDYVETGIMTAKQAAYLRNAVAERKNILVAGGTSTGKTTLVNALLAEVAKTG
DRVVLIEDTRELQCTAPNLIALRTREGVITLSDLVRSGLRLRPDRIPIGEVRGAEALDLVKAWGTGHPGGIGTLHAGSVL
AALYRLEQLIQEAVVTVPRAMIAETIDVIAVLSGRGNARRLSELATVDGIDPAIGIYRIHPVHANGDSR

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 32740; Mature: 32740

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTAMGPAIAGHLADSAVVEVMLNPDGRLWIDRLADGMADTGETITPADAERIVRLVAH
CCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
HVGAEVHEAAPRVSAELPTGERFEGLLPPVVTAPSFAIRKPAVAVFTLDDYVETGIMTAK
HHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCHHCCCCEEEEEEHHHHHHHHHHHH
QAAYLRNAVAERKNILVAGGTSTGKTTLVNALLAEVAKTGDRVVLIEDTRELQCTAPNLI
HHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEE
ALRTREGVITLSDLVRSGLRLRPDRIPIGEVRGAEALDLVKAWGTGHPGGIGTLHAGSVL
EEECCCCEEEHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
AALYRLEQLIQEAVVTVPRAMIAETIDVIAVLSGRGNARRLSELATVDGIDPAIGIYRIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
PVHANGDSR
EEECCCCCC
>Mature Secondary Structure
MLRTAMGPAIAGHLADSAVVEVMLNPDGRLWIDRLADGMADTGETITPADAERIVRLVAH
CCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
HVGAEVHEAAPRVSAELPTGERFEGLLPPVVTAPSFAIRKPAVAVFTLDDYVETGIMTAK
HHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCHHCCCCEEEEEEHHHHHHHHHHHH
QAAYLRNAVAERKNILVAGGTSTGKTTLVNALLAEVAKTGDRVVLIEDTRELQCTAPNLI
HHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEE
ALRTREGVITLSDLVRSGLRLRPDRIPIGEVRGAEALDLVKAWGTGHPGGIGTLHAGSVL
EEECCCCEEEHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
AALYRLEQLIQEAVVTVPRAMIAETIDVIAVLSGRGNARRLSELATVDGIDPAIGIYRIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
PVHANGDSR
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]