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The map label for this gene is trbC

Identifier: 162148521

GI number: 162148521

Start: 2837525

End: 2837857

Strand: Reverse

Name: trbC

Synonym: GDI_2744

Alternate gene names: NA

Gene position: 2837857-2837525 (Counterclockwise)

Preceding gene: 162148522

Following gene: 162148520

Centisome position: 71.95

GC content: 60.36

Gene sequence:

>333_bases
ATGACCCGCGCTCTCTTTCGCGTGCGCCAGCACGCGCCTGTCATTGCCGCCATGCTGCTGCTTTCGGTTGCATGGTGCTC
CTCGGCCCTGGCGTCCGGGTCGGACATGCCATGGGAAACGCCTCTGAACGAGATCCTGCAATCCGTGCAGGGTCCGGTGG
CCAAGATCATCTCGGTGATCATCATCACAATCACGGGTCTGACCTTGGCCTTCGGCGAGTCCTCAGGCGGATTCCGTCGC
CTGATCCAAATCGTCTTCGGTCTGTCCATCGCTTTTGCCGCCAGCTCGTTCTTCCTGTCGTTCTTCTCCTTCTCTGGCGG
AGCGCTGATCTGA

Upstream 100 bases:

>100_bases
GCAATGCCCGCCGGCTGTCCGAACTCGCCACCGTGGACGGGATTGATCCCGCCATAGGTATCTATCGCATTCATCCAGTA
CATGCCAACGGAGATTCTCG

Downstream 100 bases:

>100_bases
TGGCCGTCGGATATGACGATGACGCGGTACCGGGTTTCCATGTTCCGGTGCATCGGTCGCTGACTGACCCGATCCTGCTG
GGTGGGGCACCCCGAGCCGT

Product: conjugal transfer protein trbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTRALFRVRQHAPVIAAMLLLSVAWCSSALASGSDMPWETPLNEILQSVQGPVAKIISVIIITITGLTLAFGESSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFSGGALI

Sequences:

>Translated_110_residues
MTRALFRVRQHAPVIAAMLLLSVAWCSSALASGSDMPWETPLNEILQSVQGPVAKIISVIIITITGLTLAFGESSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFSGGALI
>Mature_109_residues
TRALFRVRQHAPVIAAMLLLSVAWCSSALASGSDMPWETPLNEILQSVQGPVAKIISVIIITITGLTLAFGESSGGFRRL
IQIVFGLSIAFAASSFFLSFFSFSGGALI

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11695; Mature: 11564

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRALFRVRQHAPVIAAMLLLSVAWCSSALASGSDMPWETPLNEILQSVQGPVAKIISVI
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHH
IITITGLTLAFGESSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TRALFRVRQHAPVIAAMLLLSVAWCSSALASGSDMPWETPLNEILQSVQGPVAKIISVI
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHH
IITITGLTLAFGESSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA