| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is rbsK [C]
Identifier: 162148475
GI number: 162148475
Start: 2790136
End: 2791014
Strand: Direct
Name: rbsK [C]
Synonym: GDI_2695
Alternate gene names: 162148475
Gene position: 2790136-2791014 (Clockwise)
Preceding gene: 162148474
Following gene: 162148476
Centisome position: 70.74
GC content: 68.37
Gene sequence:
>879_bases ATGAGCCGCGTCGCCGTCCTCGGCTATGCCAGCATGGATTATGTCATCGTGCTGGGTGGCGCGATCACGCCTGGCCGTAC CAGCCTGATCCGCGCGCGTCCGACCGACGGATGGCCGCGTGTCGGCGGGGCCCCGGCCTTCGTATCCCGCGCGATGAACC GGGGTGGCATCGCCCACCCCGCGATCATCAGCCAGGTCGGTGACGACGCGCTGGGATCAGCCTATCGCACCGCCCTGCAG GCCGACGGCGCAGACGTGCGCTGTCTCGATGTCGTTGCCGGAGCCCGGACGCCGGTTACCGCGATGATCTATGACGCGAC CGGCGAATGTGCCTGCCTTTACGAGCCGCTGCGCAATCCCGACGGCACGGAGCCGGCACACCTGTCCGGGCGACAGATCG CGCTGCTGGAACAGGCGGAGTGCGTGTGCCTGAGCGTTGCCCCTGCCGGGATGATCCGCCAGGCGCTGCGCCATGCCAGA CCGGACGCGATGCTGGCCTGGATCGCGAAGAACGATGCCGATGCCTTTCCCTGCGACCTGGCGGCGGAAATCGCAGGCCG CGCCGACATCATTTTCAGCAGCCTGGCCGAAGCCGACATGGTGGCGAAGGCCGGACGCGATGCCCCCGCCCGACCGGGAC AGATCCTGATCGAGACCCGGGGGCGAGACGGTGCCTGCATCCGCAGTAACGGCGTGAGCAGGCACCGGATGACGAATCCC GTGACGGTTATCGACCCGTCAGGGGCCGGCGACACGCTGGCAGGCGGCATGCTGGCCGCCCTGATACGCGACAACGCCGA TCCGGATACTGCGCTGGGCGCCGGCATGGAGGCCGCGCGAGCCATGCTGTCCGAACGGCAAAACGACAAGAGAGCCTAA
Upstream 100 bases:
>100_bases CCAGTTCCAATCGCCCCCACCTGGCCGAAGCATCGCTGGAAGACATCGCGCGGTATTTCGGCGAGGTCGTGTCGGCAACC GAAGCCGAGAAGATGCTGGG
Downstream 100 bases:
>100_bases GGAACATGTCAGAACGCGAAGATATAAAAACGGCCTGGTATATCGGCGCGACGTCCGCGGACGTCGGCAAGGTGGCGATC CTGGTCGGAGATCCGGCCCG
Product: ribokinase
Products: NA
Alternate protein names: Ribokinase-Like Domain-Containing Protein; PfkB Domain Protein
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSRVAVLGYASMDYVIVLGGAITPGRTSLIRARPTDGWPRVGGAPAFVSRAMNRGGIAHPAIISQVGDDALGSAYRTALQ ADGADVRCLDVVAGARTPVTAMIYDATGECACLYEPLRNPDGTEPAHLSGRQIALLEQAECVCLSVAPAGMIRQALRHAR PDAMLAWIAKNDADAFPCDLAAEIAGRADIIFSSLAEADMVAKAGRDAPARPGQILIETRGRDGACIRSNGVSRHRMTNP VTVIDPSGAGDTLAGGMLAALIRDNADPDTALGAGMEAARAMLSERQNDKRA
Sequences:
>Translated_292_residues MSRVAVLGYASMDYVIVLGGAITPGRTSLIRARPTDGWPRVGGAPAFVSRAMNRGGIAHPAIISQVGDDALGSAYRTALQ ADGADVRCLDVVAGARTPVTAMIYDATGECACLYEPLRNPDGTEPAHLSGRQIALLEQAECVCLSVAPAGMIRQALRHAR PDAMLAWIAKNDADAFPCDLAAEIAGRADIIFSSLAEADMVAKAGRDAPARPGQILIETRGRDGACIRSNGVSRHRMTNP VTVIDPSGAGDTLAGGMLAALIRDNADPDTALGAGMEAARAMLSERQNDKRA >Mature_291_residues SRVAVLGYASMDYVIVLGGAITPGRTSLIRARPTDGWPRVGGAPAFVSRAMNRGGIAHPAIISQVGDDALGSAYRTALQA DGADVRCLDVVAGARTPVTAMIYDATGECACLYEPLRNPDGTEPAHLSGRQIALLEQAECVCLSVAPAGMIRQALRHARP DAMLAWIAKNDADAFPCDLAAEIAGRADIIFSSLAEADMVAKAGRDAPARPGQILIETRGRDGACIRSNGVSRHRMTNPV TVIDPSGAGDTLAGGMLAALIRDNADPDTALGAGMEAARAMLSERQNDKRA
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30415; Mature: 30284
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVAVLGYASMDYVIVLGGAITPGRTSLIRARPTDGWPRVGGAPAFVSRAMNRGGIAHP CCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCH AIISQVGDDALGSAYRTALQADGADVRCLDVVAGARTPVTAMIYDATGECACLYEPLRNP HHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCEEEEEECCCCCEEEEEHHHCCC DGTEPAHLSGRQIALLEQAECVCLSVAPAGMIRQALRHARPDAMLAWIAKNDADAFPCDL CCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH AAEIAGRADIIFSSLAEADMVAKAGRDAPARPGQILIETRGRDGACIRSNGVSRHRMTNP HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCCHHHCCCC VTVIDPSGAGDTLAGGMLAALIRDNADPDTALGAGMEAARAMLSERQNDKRA EEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRVAVLGYASMDYVIVLGGAITPGRTSLIRARPTDGWPRVGGAPAFVSRAMNRGGIAHP CCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCH AIISQVGDDALGSAYRTALQADGADVRCLDVVAGARTPVTAMIYDATGECACLYEPLRNP HHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCEEEEEECCCCCEEEEEHHHCCC DGTEPAHLSGRQIALLEQAECVCLSVAPAGMIRQALRHARPDAMLAWIAKNDADAFPCDL CCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH AAEIAGRADIIFSSLAEADMVAKAGRDAPARPGQILIETRGRDGACIRSNGVSRHRMTNP HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCCHHHCCCC VTVIDPSGAGDTLAGGMLAALIRDNADPDTALGAGMEAARAMLSERQNDKRA EEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA