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The map label for this gene is ycdL [C]

Identifier: 162148474

GI number: 162148474

Start: 2789576

End: 2790139

Strand: Direct

Name: ycdL [C]

Synonym: GDI_2694

Alternate gene names: 162148474

Gene position: 2789576-2790139 (Clockwise)

Preceding gene: 162148473

Following gene: 162148475

Centisome position: 70.73

GC content: 60.82

Gene sequence:

>564_bases
ATGACTTCGCGACGCAAGATCGCGCTGCTTCTGGTCGACGTGATCAACTCGTTTTTCGATCCGGGTGAACCCAATTACTA
TCCGGGCGCCGAAGACGTCCTGCCTGTCATTGCGACCATGCTGCGCGCGGCGCGGCAGCATGGGCATCTCGTCATCCATG
CCGCCGAACGGCACCGGACGTTCCACGATGATTTCGAGTGGAAGAAACTGCCGATTCACCATCTGGAAGGCGACCCGAGC
ACCGATTTCGTCACCGGGTTCGAGCCTGCCGGACCGGCCGAGGCCGTCATCTACAAGCGTCGGTACAGCGCCTTCTTCGC
CACGGATCTGGCCCTGTTCCTGCATGAGCAGAATGTAACCCATCTCATCATCGTCGGCGTCAAGACGAATTGCTGCATCC
GCGCCACCGTGCAGGATGCCTTCGCCCATGGCTTCACCCCCATCGTTCCGCGTGAGGCGACCAGTTCCAATCGCCCCCAC
CTGGCCGAAGCATCGCTGGAAGACATCGCGCGGTATTTCGGCGAGGTCGTGTCGGCAACCGAAGCCGAGAAGATGCTGGG
ATGA

Upstream 100 bases:

>100_bases
AGGCCGCGCCCTATCTGGCCGTGATCTGCGTGCTGGGCGCCCAGGCCGTCGCCAACCGTCATCAGCCCAACCTCCAGCGC
ATGCTGAAAGGACTGAAAAC

Downstream 100 bases:

>100_bases
GCCGCGTCGCCGTCCTCGGCTATGCCAGCATGGATTATGTCATCGTGCTGGGTGGCGCGATCACGCCTGGCCGTACCAGC
CTGATCCGCGCGCGTCCGAC

Product: isochorismatase family protein rutB

Products: NA

Alternate protein names: N-carbamoylsarcosine amidohydrolase; CSHase [H]

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTSRRKIALLLVDVINSFFDPGEPNYYPGAEDVLPVIATMLRAARQHGHLVIHAAERHRTFHDDFEWKKLPIHHLEGDPS
TDFVTGFEPAGPAEAVIYKRRYSAFFATDLALFLHEQNVTHLIIVGVKTNCCIRATVQDAFAHGFTPIVPREATSSNRPH
LAEASLEDIARYFGEVVSATEAEKMLG

Sequences:

>Translated_187_residues
MTSRRKIALLLVDVINSFFDPGEPNYYPGAEDVLPVIATMLRAARQHGHLVIHAAERHRTFHDDFEWKKLPIHHLEGDPS
TDFVTGFEPAGPAEAVIYKRRYSAFFATDLALFLHEQNVTHLIIVGVKTNCCIRATVQDAFAHGFTPIVPREATSSNRPH
LAEASLEDIARYFGEVVSATEAEKMLG
>Mature_186_residues
TSRRKIALLLVDVINSFFDPGEPNYYPGAEDVLPVIATMLRAARQHGHLVIHAAERHRTFHDDFEWKKLPIHHLEGDPST
DFVTGFEPAGPAEAVIYKRRYSAFFATDLALFLHEQNVTHLIIVGVKTNCCIRATVQDAFAHGFTPIVPREATSSNRPHL
AEASLEDIARYFGEVVSATEAEKMLG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: =3.5.1.59 [H]

Molecular weight: Translated: 20894; Mature: 20763

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRRKIALLLVDVINSFFDPGEPNYYPGAEDVLPVIATMLRAARQHGHLVIHAAERHRT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCC
FHDDFEWKKLPIHHLEGDPSTDFVTGFEPAGPAEAVIYKRRYSAFFATDLALFLHEQNVT
CCCCCCCCCCCCEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
HLIIVGVKTNCCIRATVQDAFAHGFTPIVPREATSSNRPHLAEASLEDIARYFGEVVSAT
EEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EAEKMLG
HHHHHCC
>Mature Secondary Structure 
TSRRKIALLLVDVINSFFDPGEPNYYPGAEDVLPVIATMLRAARQHGHLVIHAAERHRT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCC
FHDDFEWKKLPIHHLEGDPSTDFVTGFEPAGPAEAVIYKRRYSAFFATDLALFLHEQNVT
CCCCCCCCCCCCEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
HLIIVGVKTNCCIRATVQDAFAHGFTPIVPREATSSNRPHLAEASLEDIARYFGEVVSAT
EEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EAEKMLG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1381445; 8913306 [H]