| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yufQ [H]
Identifier: 162148473
GI number: 162148473
Start: 2788692
End: 2789579
Strand: Direct
Name: yufQ [H]
Synonym: GDI_2693
Alternate gene names: 162148473
Gene position: 2788692-2789579 (Clockwise)
Preceding gene: 162148472
Following gene: 162148474
Centisome position: 70.7
GC content: 67.57
Gene sequence:
>888_bases ATGAGCCTGACGTTCCTTCATGACGCGCTTGCCGCGACGACGCCGATCCTCCTTGCCGCCCTTGGCGGAGCGATCAACCG CCAGGGCGGCACGGTGAACGTCGGACTGGACTCGTTCATCCTGGCCGGCGCCCTTGCCGGAGAAGTCGCGTCGGCGGTGA CGGGTTCATCCTTGGGCGGGGTGGCAGGTGCCGCGATCGCCGGCGGGGGGACCGCAGCCCTGATGGCGGCTGTCATCCGC TTTGCCCGCACAGACCAGATCGTGACGGGCCTGGGCTTCGACATGAGCGCGCAGGCCGTATGCCGCCTGGTCGTCAAGCT CGCCTTCGGCGTTACGGGACTGCTGTCCCTTCCTGCGGCGCGACGCCTTCCAGTCGTTGCGATACCGGAACTTGGAACGC TCGATGCGCTGACGCTGCTGTCCTGGAGCCTTGTCCCGGCCTGCGCCTGGTTTCTCCGTCATCATCGGCTGGGACTTCGT CTGCGCGCGGCGGGCGAGTCACCGGGTGCGGCGACAGCCCTGGGTTTCGACCCAAAACGTCTGCAGGCCGCCGCCACGAT CGCAGCGGGCGTGTTGGCCGGCCTGGCCGGAGCGGACCTTTCTCTTGGGATCGTCGGCGCGTTCAGCACGAATATTTCAA ACGGACGCGGCTTCATGGCGCTGGCGGCTTTCTATATCGGCCGGGCGCGTCCCTTCTCCACGGCGGCGGCGTGCCTGATG CTGGGCCTGCTGACCGAGGCCGCCATCCATGCACAGGCCGACGGATTGCCGACAGCGCTGGCGCAGGCCGCGCCCTATCT GGCCGTGATCTGCGTGCTGGGCGCCCAGGCCGTCGCCAACCGTCATCAGCCCAACCTCCAGCGCATGCTGAAAGGACTGA AAACATGA
Upstream 100 bases:
>100_bases AAGAGGTCGTGGACCTGATCGTCGGAAGCGTCATCATTTTCTCGTCCGCGCGCCTGACGTTCGGACGTCCCGACATGTCG TCCCTGGCAAGGGGGGCGGA
Downstream 100 bases:
>100_bases CTTCGCGACGCAAGATCGCGCTGCTTCTGGTCGACGTGATCAACTCGTTTTTCGATCCGGGTGAACCCAATTACTATCCG GGCGCCGAAGACGTCCTGCC
Product: amino acid transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSLTFLHDALAATTPILLAALGGAINRQGGTVNVGLDSFILAGALAGEVASAVTGSSLGGVAGAAIAGGGTAALMAAVIR FARTDQIVTGLGFDMSAQAVCRLVVKLAFGVTGLLSLPAARRLPVVAIPELGTLDALTLLSWSLVPACAWFLRHHRLGLR LRAAGESPGAATALGFDPKRLQAAATIAAGVLAGLAGADLSLGIVGAFSTNISNGRGFMALAAFYIGRARPFSTAAACLM LGLLTEAAIHAQADGLPTALAQAAPYLAVICVLGAQAVANRHQPNLQRMLKGLKT
Sequences:
>Translated_295_residues MSLTFLHDALAATTPILLAALGGAINRQGGTVNVGLDSFILAGALAGEVASAVTGSSLGGVAGAAIAGGGTAALMAAVIR FARTDQIVTGLGFDMSAQAVCRLVVKLAFGVTGLLSLPAARRLPVVAIPELGTLDALTLLSWSLVPACAWFLRHHRLGLR LRAAGESPGAATALGFDPKRLQAAATIAAGVLAGLAGADLSLGIVGAFSTNISNGRGFMALAAFYIGRARPFSTAAACLM LGLLTEAAIHAQADGLPTALAQAAPYLAVICVLGAQAVANRHQPNLQRMLKGLKT >Mature_294_residues SLTFLHDALAATTPILLAALGGAINRQGGTVNVGLDSFILAGALAGEVASAVTGSSLGGVAGAAIAGGGTAALMAAVIRF ARTDQIVTGLGFDMSAQAVCRLVVKLAFGVTGLLSLPAARRLPVVAIPELGTLDALTLLSWSLVPACAWFLRHHRLGLRL RAAGESPGAATALGFDPKRLQAAATIAAGVLAGLAGADLSLGIVGAFSTNISNGRGFMALAAFYIGRARPFSTAAACLML GLLTEAAIHAQADGLPTALAQAAPYLAVICVLGAQAVANRHQPNLQRMLKGLKT
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 29579; Mature: 29448
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTFLHDALAATTPILLAALGGAINRQGGTVNVGLDSFILAGALAGEVASAVTGSSLGG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCC VAGAAIAGGGTAALMAAVIRFARTDQIVTGLGFDMSAQAVCRLVVKLAFGVTGLLSLPAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH RRLPVVAIPELGTLDALTLLSWSLVPACAWFLRHHRLGLRLRAAGESPGAATALGFDPKR HCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEECCCCHHH LQAAATIAAGVLAGLAGADLSLGIVGAFSTNISNGRGFMALAAFYIGRARPFSTAAACLM HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH LGLLTEAAIHAQADGLPTALAQAAPYLAVICVLGAQAVANRHQPNLQRMLKGLKT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure SLTFLHDALAATTPILLAALGGAINRQGGTVNVGLDSFILAGALAGEVASAVTGSSLGG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCC VAGAAIAGGGTAALMAAVIRFARTDQIVTGLGFDMSAQAVCRLVVKLAFGVTGLLSLPAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH RRLPVVAIPELGTLDALTLLSWSLVPACAWFLRHHRLGLRLRAAGESPGAATALGFDPKR HCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEECCCCHHH LQAAATIAAGVLAGLAGADLSLGIVGAFSTNISNGRGFMALAAFYIGRARPFSTAAACLM HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH LGLLTEAAIHAQADGLPTALAQAAPYLAVICVLGAQAVANRHQPNLQRMLKGLKT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]