Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is yufN [H]

Identifier: 162148470

GI number: 162148470

Start: 2785203

End: 2786195

Strand: Direct

Name: yufN [H]

Synonym: GDI_2690

Alternate gene names: 162148470

Gene position: 2785203-2786195 (Clockwise)

Preceding gene: 162148469

Following gene: 162148471

Centisome position: 70.62

GC content: 62.74

Gene sequence:

>993_bases
TTGCCGGCCGCAAGCTGTCCGGCAAGAAGCGCTGAAGCCCCGCATGCCGTCCTGGTCGTCGGCCAGGGCGGCCTGGGCGA
CCAGTCCTATAACGATCTGGGTACCGCAGGCTTTCTGCAGGGTGTTCGTGACATCGGTGTCACGGGGCGCATCGTGGAAA
CCGCCTCGGTCGTATCCGAGGGCGCCGATATCCTGCGTCAGGCCGCGGCGGCGGGATTCGGACTGATTGTCGACCTGGAA
TACGCCCACGGTGCGGTCATCGCCGAAGTCGCGCCGCAATTCGCGCGCTGCCGTTTCGTGACATTGAACCAGGTTGTGCA
TGGACCCAACATCACATCGATCCTGTTTCAGGAACAGGAGGGATCATACCTGGCCGGGGTCCTGGCGGCAGCATCCCTGC
GCGACCGTGCGCTGCCGGGCTTGGATCGCCATGCCGGCCTGGGCGTGATCGGCGGCGTACGGTCGGCGGGGATCGATAAG
TTCATCGTCGGCTTCATCCAGGGCGCACGATCCATAGACCCGAAAATCACGATTCACGTCGCTTATGCCAATTCTTTTGG
AGATCCGGCCCTCGGCTTCGAAATGGCGCGTGCCATGTATCGCGGTGGCGTCGGTATCATCTATGCCGTCGCCGGCACGA
CAGGGATAGGCGCCATACGGGCGGCGCGGGACATGAACCGCTACGCCATCGGCGTCGACCAGGACGAGGACGGTCTTGCG
CCGGGGCATGTCCTGACCAGCATGGTCAAACATACAGACCTGGCCGTACGAAATGTCGTGCGGTCATGGCATGACGGAAC
GCTGCCCGACGACGGCGTGATCCGCATGGGCCTGGCCAGCGGAGGCATCGGCTTGAGCGACATGCGTTTCACGCGTGCAA
TCCTGCCTCCGGATGTCCTGTCCGACGTCGCACGGGCACGGAGCGATATCCTGAACGATCATGTTCATGTCTGGGACGTA
ACCGCCCAGGGTTATCCGGATTTCTATCAATGA

Upstream 100 bases:

>100_bases
ATCAGGAATGCCACGGCGGATAGGGAGCCTGTCAATGACAAGACGGATGCGTCATCCACAGTTGACGGCGGTCCTGGTCT
CGATTTCGGTCGCGGGCGCC

Downstream 100 bases:

>100_bases
ACGCGTTGCCGCCCATTCGTATCGAGACGCGCGGCCTGACCCGTCTGTTCGGCACGTTCGTCGCCAACGACGACATTTCG
ATTCAGATCCATCGGGGGTC

Product: membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MPAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSEGADILRQAAAAGFGLIVDLE
YAHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQEGSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDK
FIVGFIQGARSIDPKITIHVAYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLA
PGHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVLSDVARARSDILNDHVHVWDV
TAQGYPDFYQ

Sequences:

>Translated_330_residues
MPAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSEGADILRQAAAAGFGLIVDLE
YAHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQEGSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDK
FIVGFIQGARSIDPKITIHVAYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLA
PGHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVLSDVARARSDILNDHVHVWDV
TAQGYPDFYQ
>Mature_329_residues
PAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSEGADILRQAAAAGFGLIVDLEY
AHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQEGSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDKF
IVGFIQGARSIDPKITIHVAYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLAP
GHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVLSDVARARSDILNDHVHVWDVT
AQGYPDFYQ

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 34611; Mature: 34480

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSE
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHH
GADILRQAAAAGFGLIVDLEYAHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQE
HHHHHHHHHHCCCEEEEEEECCCCCHHHHHCHHHHHEEEEEHHHHHCCCCCEEEEEECCC
GSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDKFIVGFIQGARSIDPKITIHV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEEE
AYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLA
EEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCC
PGHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHHH
SDVARARSDILNDHVHVWDVTAQGYPDFYQ
HHHHHHHHHHHCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
PAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSE
CCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHH
GADILRQAAAAGFGLIVDLEYAHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQE
HHHHHHHHHHCCCEEEEEEECCCCCHHHHHCHHHHHEEEEEHHHHHCCCCCEEEEEECCC
GSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDKFIVGFIQGARSIDPKITIHV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEEE
AYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLA
EEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCC
PGHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHHH
SDVARARSDILNDHVHVWDVTAQGYPDFYQ
HHHHHHHHHHHCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]