| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is yufN [H]
Identifier: 162148470
GI number: 162148470
Start: 2785203
End: 2786195
Strand: Direct
Name: yufN [H]
Synonym: GDI_2690
Alternate gene names: 162148470
Gene position: 2785203-2786195 (Clockwise)
Preceding gene: 162148469
Following gene: 162148471
Centisome position: 70.62
GC content: 62.74
Gene sequence:
>993_bases TTGCCGGCCGCAAGCTGTCCGGCAAGAAGCGCTGAAGCCCCGCATGCCGTCCTGGTCGTCGGCCAGGGCGGCCTGGGCGA CCAGTCCTATAACGATCTGGGTACCGCAGGCTTTCTGCAGGGTGTTCGTGACATCGGTGTCACGGGGCGCATCGTGGAAA CCGCCTCGGTCGTATCCGAGGGCGCCGATATCCTGCGTCAGGCCGCGGCGGCGGGATTCGGACTGATTGTCGACCTGGAA TACGCCCACGGTGCGGTCATCGCCGAAGTCGCGCCGCAATTCGCGCGCTGCCGTTTCGTGACATTGAACCAGGTTGTGCA TGGACCCAACATCACATCGATCCTGTTTCAGGAACAGGAGGGATCATACCTGGCCGGGGTCCTGGCGGCAGCATCCCTGC GCGACCGTGCGCTGCCGGGCTTGGATCGCCATGCCGGCCTGGGCGTGATCGGCGGCGTACGGTCGGCGGGGATCGATAAG TTCATCGTCGGCTTCATCCAGGGCGCACGATCCATAGACCCGAAAATCACGATTCACGTCGCTTATGCCAATTCTTTTGG AGATCCGGCCCTCGGCTTCGAAATGGCGCGTGCCATGTATCGCGGTGGCGTCGGTATCATCTATGCCGTCGCCGGCACGA CAGGGATAGGCGCCATACGGGCGGCGCGGGACATGAACCGCTACGCCATCGGCGTCGACCAGGACGAGGACGGTCTTGCG CCGGGGCATGTCCTGACCAGCATGGTCAAACATACAGACCTGGCCGTACGAAATGTCGTGCGGTCATGGCATGACGGAAC GCTGCCCGACGACGGCGTGATCCGCATGGGCCTGGCCAGCGGAGGCATCGGCTTGAGCGACATGCGTTTCACGCGTGCAA TCCTGCCTCCGGATGTCCTGTCCGACGTCGCACGGGCACGGAGCGATATCCTGAACGATCATGTTCATGTCTGGGACGTA ACCGCCCAGGGTTATCCGGATTTCTATCAATGA
Upstream 100 bases:
>100_bases ATCAGGAATGCCACGGCGGATAGGGAGCCTGTCAATGACAAGACGGATGCGTCATCCACAGTTGACGGCGGTCCTGGTCT CGATTTCGGTCGCGGGCGCC
Downstream 100 bases:
>100_bases ACGCGTTGCCGCCCATTCGTATCGAGACGCGCGGCCTGACCCGTCTGTTCGGCACGTTCGTCGCCAACGACGACATTTCG ATTCAGATCCATCGGGGGTC
Product: membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MPAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSEGADILRQAAAAGFGLIVDLE YAHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQEGSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDK FIVGFIQGARSIDPKITIHVAYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLA PGHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVLSDVARARSDILNDHVHVWDV TAQGYPDFYQ
Sequences:
>Translated_330_residues MPAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSEGADILRQAAAAGFGLIVDLE YAHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQEGSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDK FIVGFIQGARSIDPKITIHVAYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLA PGHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVLSDVARARSDILNDHVHVWDV TAQGYPDFYQ >Mature_329_residues PAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSEGADILRQAAAAGFGLIVDLEY AHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQEGSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDKF IVGFIQGARSIDPKITIHVAYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLAP GHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVLSDVARARSDILNDHVHVWDVT AQGYPDFYQ
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 34611; Mature: 34480
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSE CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHH GADILRQAAAAGFGLIVDLEYAHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQE HHHHHHHHHHCCCEEEEEEECCCCCHHHHHCHHHHHEEEEEHHHHHCCCCCEEEEEECCC GSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDKFIVGFIQGARSIDPKITIHV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEEE AYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLA EEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCC PGHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHHH SDVARARSDILNDHVHVWDVTAQGYPDFYQ HHHHHHHHHHHCCCEEEEEEEECCCCCCCC >Mature Secondary Structure PAASCPARSAEAPHAVLVVGQGGLGDQSYNDLGTAGFLQGVRDIGVTGRIVETASVVSE CCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHH GADILRQAAAAGFGLIVDLEYAHGAVIAEVAPQFARCRFVTLNQVVHGPNITSILFQEQE HHHHHHHHHHCCCEEEEEEECCCCCHHHHHCHHHHHEEEEEHHHHHCCCCCEEEEEECCC GSYLAGVLAAASLRDRALPGLDRHAGLGVIGGVRSAGIDKFIVGFIQGARSIDPKITIHV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEEE AYANSFGDPALGFEMARAMYRGGVGIIYAVAGTTGIGAIRAARDMNRYAIGVDQDEDGLA EEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCC PGHVLTSMVKHTDLAVRNVVRSWHDGTLPDDGVIRMGLASGGIGLSDMRFTRAILPPDVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHHH SDVARARSDILNDHVHVWDVTAQGYPDFYQ HHHHHHHHHHHCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]