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The map label for this gene is yvoA [H]

Identifier: 162148469

GI number: 162148469

Start: 2784362

End: 2785237

Strand: Direct

Name: yvoA [H]

Synonym: GDI_2689

Alternate gene names: 162148469

Gene position: 2784362-2785237 (Clockwise)

Preceding gene: 162148468

Following gene: 162148470

Centisome position: 70.59

GC content: 63.01

Gene sequence:

>876_bases
TTGACTGGACAACCGGTCAGGTTGCAGACAGCTTGCGAAGGCCCCATGGTTCCATCTCCGCTATATCAACAGATCGCCGA
ACGTCTCCGTCAGGAAATCGACGCGAGCAAGCCCGGCACAAAACTGGCGAGCGAACCGGCCTTGGCGAACGCCTGGGGCG
TCAGCCGCTTTACCGTCTCCCGCGCGGTCGAGGCACTCGTTGACGAAGGGCTCGTCGTTCGGCGCCAGGGGGCAGGCACC
TTCGTGGCGGATCGGCCTCTGCGTAGGACCCCGGGCATGCTTTTAAGCTTTACCGAGGCAGTGAAAGCCGCGGGACGGGT
CGCGACGCACCGTCTATGCGCCTTCGAGAAATGGCCCGGGAACGGCGTGCCGCCCTTCGAAAGCGATGGCCCGGTCACGG
TCATGGACCGCCTGCGCTACGTCGACGGCGTGCCTATTGCCCGCCACCATTCGGTGGTGCCCGAGGAACTGGTGACCGCA
ACCGGTCTGACCAGACAGATCGCGGCGCGCGAGGATTTTTCGTTCTACAGGTTTCTGGCGACGCATGGTTACCCGGTAGC
AAGCGCCTCCGAACGGCTGAGCGGTCGCCTGGCCACGCCCGACGAACAGGTGTTGCTCGGCCTGAACGATCCCGCCGTTC
TGATCGTCGTGCATCGCCAGTCCTTCGACGCTTCCGGCCGACTGCTCGATATGGTCGAGGCGGTCTATGACGCTCGCCAT
TATTATTACGAATCACGATTGATCAGGAATGCCACGGCGGATAGGGAGCCTGTCAATGACAAGACGGATGCGTCATCCAC
AGTTGACGGCGGTCCTGGTCTCGATTTCGGTCGCGGGCGCCTTGCCGGCCGCAAGCTGTCCGGCAAGAAGCGCTGA

Upstream 100 bases:

>100_bases
AGGGATAATGATTTTAATTCAGCTCATTAACAAATGGCACAGCCACATTCATCTCGATATCGAACGAAATGTCTTGCCTC
CTGCGTACCAGTCTGCATAG

Downstream 100 bases:

>100_bases
AGCCCCGCATGCCGTCCTGGTCGTCGGCCAGGGCGGCCTGGGCGACCAGTCCTATAACGATCTGGGTACCGCAGGCTTTC
TGCAGGGTGTTCGTGACATC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTGQPVRLQTACEGPMVPSPLYQQIAERLRQEIDASKPGTKLASEPALANAWGVSRFTVSRAVEALVDEGLVVRRQGAGT
FVADRPLRRTPGMLLSFTEAVKAAGRVATHRLCAFEKWPGNGVPPFESDGPVTVMDRLRYVDGVPIARHHSVVPEELVTA
TGLTRQIAAREDFSFYRFLATHGYPVASASERLSGRLATPDEQVLLGLNDPAVLIVVHRQSFDASGRLLDMVEAVYDARH
YYYESRLIRNATADREPVNDKTDASSTVDGGPGLDFGRGRLAGRKLSGKKR

Sequences:

>Translated_291_residues
MTGQPVRLQTACEGPMVPSPLYQQIAERLRQEIDASKPGTKLASEPALANAWGVSRFTVSRAVEALVDEGLVVRRQGAGT
FVADRPLRRTPGMLLSFTEAVKAAGRVATHRLCAFEKWPGNGVPPFESDGPVTVMDRLRYVDGVPIARHHSVVPEELVTA
TGLTRQIAAREDFSFYRFLATHGYPVASASERLSGRLATPDEQVLLGLNDPAVLIVVHRQSFDASGRLLDMVEAVYDARH
YYYESRLIRNATADREPVNDKTDASSTVDGGPGLDFGRGRLAGRKLSGKKR
>Mature_290_residues
TGQPVRLQTACEGPMVPSPLYQQIAERLRQEIDASKPGTKLASEPALANAWGVSRFTVSRAVEALVDEGLVVRRQGAGTF
VADRPLRRTPGMLLSFTEAVKAAGRVATHRLCAFEKWPGNGVPPFESDGPVTVMDRLRYVDGVPIARHHSVVPEELVTAT
GLTRQIAAREDFSFYRFLATHGYPVASASERLSGRLATPDEQVLLGLNDPAVLIVVHRQSFDASGRLLDMVEAVYDARHY
YYESRLIRNATADREPVNDKTDASSTVDGGPGLDFGRGRLAGRKLSGKKR

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790118, Length=152, Percent_Identity=30.2631578947368, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786950, Length=166, Percent_Identity=31.9277108433735, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 31781; Mature: 31650

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQPVRLQTACEGPMVPSPLYQQIAERLRQEIDASKPGTKLASEPALANAWGVSRFTVS
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHH
RAVEALVDEGLVVRRQGAGTFVADRPLRRTPGMLLSFTEAVKAAGRVATHRLCAFEKWPG
HHHHHHHHCCEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NGVPPFESDGPVTVMDRLRYVDGVPIARHHSVVPEELVTATGLTRQIAAREDFSFYRFLA
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCHHHHHHHHCCHHHHHHHH
THGYPVASASERLSGRLATPDEQVLLGLNDPAVLIVVHRQSFDASGRLLDMVEAVYDARH
HCCCCCCCHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
YYYESRLIRNATADREPVNDKTDASSTVDGGPGLDFGRGRLAGRKLSGKKR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGQPVRLQTACEGPMVPSPLYQQIAERLRQEIDASKPGTKLASEPALANAWGVSRFTVS
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHH
RAVEALVDEGLVVRRQGAGTFVADRPLRRTPGMLLSFTEAVKAAGRVATHRLCAFEKWPG
HHHHHHHHCCEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NGVPPFESDGPVTVMDRLRYVDGVPIARHHSVVPEELVTATGLTRQIAAREDFSFYRFLA
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCHHHHHHHHCCHHHHHHHH
THGYPVASASERLSGRLATPDEQVLLGLNDPAVLIVVHRQSFDASGRLLDMVEAVYDARH
HCCCCCCCHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
YYYESRLIRNATADREPVNDKTDASSTVDGGPGLDFGRGRLAGRKLSGKKR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]