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The map label for this gene is yufO [H]

Identifier: 162148471

GI number: 162148471

Start: 2786192

End: 2787664

Strand: Direct

Name: yufO [H]

Synonym: GDI_2691

Alternate gene names: 162148471

Gene position: 2786192-2787664 (Clockwise)

Preceding gene: 162148470

Following gene: 162148472

Centisome position: 70.64

GC content: 64.83

Gene sequence:

>1473_bases
ATGAACGCGTTGCCGCCCATTCGTATCGAGACGCGCGGCCTGACCCGTCTGTTCGGCACGTTCGTCGCCAACGACGACAT
TTCGATTCAGATCCATCGGGGGTCGATTCACGCCTTCCTGGGGGGCAATGGCGCGGGAAAGACGACCCTGATGCGCATGC
TGCAGGGACTGTGCCAGCCCACCGGTGGCGACATCCTGATCGATGGCCAACGGGTTGTCCTGTCCTCACCGCAGGTTGCG
TTCCGCCATGGAATCGGCATGGTCCACCAGGAGTTCAATCTTGTTTCCGGCCTGACGCTTCTGGAAAACCTCGTTCTCGG
CGCGGAGCCGGTCGGCCGGTCCGGTGTGGTCGACTGGAAGGCAGCGCGTTGCGCGGCCGAGGAACTGGCACGCACGATTG
GCGTCGCGGTCGACTGGGACGCGACCGTGTCGGCGACACCGCTTCATGTTCTGCAGGTTATCGAGATTCTCCGTATCCTG
TATCGCGGCGCGGACATCCTGATTCTGGACGAACCCAGCGCGGTTCTGGCGCATGAACAGGTCGCCTCGCTTCTGGGGAT
TCTGCGTCGCTTGCGCGATAACGGGCGCACGATCCTGTTCATCAGTCATCGTCTGAACGAAGTCCTCGATATTGCCGACA
GGATTACGGTTCTTCGGGAAGGGCGCCATCAGTCCACGATCGAGCGCATCAGCGCCGACCGTAACCTTCTGATGCGCGAA
GTCACAGGAGAGGATATCGTCTTTACAGCCCCCGCGGAGCAGGTCGCGGGCGAGGTGTGCCTGACGGCGCGCGGCGTATG
CGTCACCGACGATAGCGGCGTCGTTCGTACCAGGGATATTTCCCTCGATATCCGGGCTGGCGAGATACTGGCGATAACCG
GTGCGCCCGGCCGGGGGCAGATTGAGCTTCTCGAGGTTCTGGCCGGCCTGCGCCGCGCGGCGGCCGGCACAATCTCCATC
GACGGGCGGAACATCACCGCCTGCTCCGTGACGGCGCGCCGGCGTGCCGGCATCCGATATCTCAGCGCCGATCGCGCCAC
GGAAAGTCTGTGCCGGGATATGTCCATTCGCGACAACGCCATCGCGGGCCGCCATCGCGTCCGACCCTTCAGCCGGCTGC
GGATTCTGGATCATGCCGCCATTCGCGCGCATACCGCGGCATTGCTGGACCGCTTTTCGGTCCGGCGGCCGGCCGACGAC
CTGCCGGTCGGCGTCCTGTCGGGCGGCAACCAGCAACGCGTCGCCCTGGCGCGCGAACTGGACGGTGCGTCCCGCATCTT
GCTGGTCGCGCAGCCGACCCGCGGCGTCGATCTGGCCGGAATTGCCTTCATTCACGGCGTATTGCGCGATTTCGTCGAAT
CCGGGGGCGCCGTCGTCATGGTTTCGGAGGACCGGGACGAAGTCGAGGCGCTGGCTTCGCGCGTTCTTCAACTGCGCGAG
GACGGGCGGTTGCTGCCCGTGCATGCGGCATGA

Upstream 100 bases:

>100_bases
CGGATGTCCTGTCCGACGTCGCACGGGCACGGAGCGATATCCTGAACGATCATGTTCATGTCTGGGACGTAACCGCCCAG
GGTTATCCGGATTTCTATCA

Downstream 100 bases:

>100_bases
ACGGAGCGCTTCGTCTCTACTGGCTGACATCGTCGCTGCTGGCGCTGATGTTCGCCACCGCGATCATCACGCTCAGCGGC
TTCAACCCGATGCATGTCCT

Product: ABC transporter ATP-binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MNALPPIRIETRGLTRLFGTFVANDDISIQIHRGSIHAFLGGNGAGKTTLMRMLQGLCQPTGGDILIDGQRVVLSSPQVA
FRHGIGMVHQEFNLVSGLTLLENLVLGAEPVGRSGVVDWKAARCAAEELARTIGVAVDWDATVSATPLHVLQVIEILRIL
YRGADILILDEPSAVLAHEQVASLLGILRRLRDNGRTILFISHRLNEVLDIADRITVLREGRHQSTIERISADRNLLMRE
VTGEDIVFTAPAEQVAGEVCLTARGVCVTDDSGVVRTRDISLDIRAGEILAITGAPGRGQIELLEVLAGLRRAAAGTISI
DGRNITACSVTARRRAGIRYLSADRATESLCRDMSIRDNAIAGRHRVRPFSRLRILDHAAIRAHTAALLDRFSVRRPADD
LPVGVLSGGNQQRVALARELDGASRILLVAQPTRGVDLAGIAFIHGVLRDFVESGGAVVMVSEDRDEVEALASRVLQLRE
DGRLLPVHAA

Sequences:

>Translated_490_residues
MNALPPIRIETRGLTRLFGTFVANDDISIQIHRGSIHAFLGGNGAGKTTLMRMLQGLCQPTGGDILIDGQRVVLSSPQVA
FRHGIGMVHQEFNLVSGLTLLENLVLGAEPVGRSGVVDWKAARCAAEELARTIGVAVDWDATVSATPLHVLQVIEILRIL
YRGADILILDEPSAVLAHEQVASLLGILRRLRDNGRTILFISHRLNEVLDIADRITVLREGRHQSTIERISADRNLLMRE
VTGEDIVFTAPAEQVAGEVCLTARGVCVTDDSGVVRTRDISLDIRAGEILAITGAPGRGQIELLEVLAGLRRAAAGTISI
DGRNITACSVTARRRAGIRYLSADRATESLCRDMSIRDNAIAGRHRVRPFSRLRILDHAAIRAHTAALLDRFSVRRPADD
LPVGVLSGGNQQRVALARELDGASRILLVAQPTRGVDLAGIAFIHGVLRDFVESGGAVVMVSEDRDEVEALASRVLQLRE
DGRLLPVHAA
>Mature_490_residues
MNALPPIRIETRGLTRLFGTFVANDDISIQIHRGSIHAFLGGNGAGKTTLMRMLQGLCQPTGGDILIDGQRVVLSSPQVA
FRHGIGMVHQEFNLVSGLTLLENLVLGAEPVGRSGVVDWKAARCAAEELARTIGVAVDWDATVSATPLHVLQVIEILRIL
YRGADILILDEPSAVLAHEQVASLLGILRRLRDNGRTILFISHRLNEVLDIADRITVLREGRHQSTIERISADRNLLMRE
VTGEDIVFTAPAEQVAGEVCLTARGVCVTDDSGVVRTRDISLDIRAGEILAITGAPGRGQIELLEVLAGLRRAAAGTISI
DGRNITACSVTARRRAGIRYLSADRATESLCRDMSIRDNAIAGRHRVRPFSRLRILDHAAIRAHTAALLDRFSVRRPADD
LPVGVLSGGNQQRVALARELDGASRILLVAQPTRGVDLAGIAFIHGVLRDFVESGGAVVMVSEDRDEVEALASRVLQLRE
DGRLLPVHAA

Specific function: Part Of The Binding-Protein-Dependent Transport System For Ribose. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG3845

COG function: function code R; ABC-type uncharacterized transport systems, ATPase components

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=201, Percent_Identity=29.8507462686567, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI105990541, Length=200, Percent_Identity=29.5, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI27881501, Length=218, Percent_Identity=29.8165137614679, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI30795238, Length=218, Percent_Identity=29.8165137614679, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI21536376, Length=205, Percent_Identity=29.2682926829268, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI171184400, Length=236, Percent_Identity=29.2372881355932, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI150417984, Length=253, Percent_Identity=27.6679841897233, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI45446740, Length=205, Percent_Identity=23.4146341463415, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI47078218, Length=205, Percent_Identity=23.4146341463415, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1790190, Length=474, Percent_Identity=31.4345991561181, Blast_Score=255, Evalue=5e-69,
Organism=Escherichia coli, GI1788472, Length=472, Percent_Identity=29.6610169491525, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI48995001, Length=482, Percent_Identity=32.1576763485477, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1789991, Length=487, Percent_Identity=31.4168377823409, Blast_Score=225, Evalue=6e-60,
Organism=Escherichia coli, GI1790525, Length=489, Percent_Identity=30.2658486707566, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1788897, Length=470, Percent_Identity=31.2765957446809, Blast_Score=222, Evalue=5e-59,
Organism=Escherichia coli, GI1788210, Length=471, Percent_Identity=30.7855626326964, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI1787792, Length=468, Percent_Identity=32.9059829059829, Blast_Score=211, Evalue=7e-56,
Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=31.2217194570136, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1790467, Length=216, Percent_Identity=30.5555555555556, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=29.4930875576037, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1787712, Length=284, Percent_Identity=28.169014084507, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87081782, Length=214, Percent_Identity=28.9719626168224, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1789864, Length=226, Percent_Identity=30.0884955752212, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI48994943, Length=219, Percent_Identity=31.5068493150685, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=30.3030303030303, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=28.755364806867, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789032, Length=315, Percent_Identity=27.6190476190476, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787089, Length=214, Percent_Identity=30.8411214953271, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786872, Length=215, Percent_Identity=26.5116279069767, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788761, Length=204, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=28.0373831775701, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790544, Length=230, Percent_Identity=31.304347826087, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788506, Length=505, Percent_Identity=24.950495049505, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87082268, Length=204, Percent_Identity=28.921568627451, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1786803, Length=218, Percent_Identity=28.4403669724771, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788644, Length=240, Percent_Identity=27.9166666666667, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787105, Length=211, Percent_Identity=28.9099526066351, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI2367384, Length=538, Percent_Identity=22.4907063197026, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786253, Length=201, Percent_Identity=29.8507462686567, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787758, Length=202, Percent_Identity=28.2178217821782, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1789672, Length=220, Percent_Identity=26.8181818181818, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=26.7543859649123, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786319, Length=195, Percent_Identity=28.7179487179487, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI48994997, Length=214, Percent_Identity=30.3738317757009, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787370, Length=207, Percent_Identity=28.0193236714976, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87081834, Length=234, Percent_Identity=26.0683760683761, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1789962, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=29.4930875576037, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1788540, Length=231, Percent_Identity=29.4372294372294, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787164, Length=210, Percent_Identity=25.2380952380952, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786654, Length=231, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786703, Length=186, Percent_Identity=29.5698924731183, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786345, Length=200, Percent_Identity=27, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1788450, Length=221, Percent_Identity=24.4343891402715, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1789593, Length=197, Percent_Identity=27.9187817258883, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=228, Percent_Identity=30.2631578947368, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI193208177, Length=202, Percent_Identity=31.6831683168317, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=222, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28571209, Length=220, Percent_Identity=30.4545454545455, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI221512771, Length=221, Percent_Identity=26.6968325791855, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24648314, Length=238, Percent_Identity=27.3109243697479, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24666092, Length=238, Percent_Identity=28.9915966386555, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574150, Length=204, Percent_Identity=29.4117647058824, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007328, Length=204, Percent_Identity=29.4117647058824, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007184, Length=317, Percent_Identity=23.9747634069401, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221500365, Length=317, Percent_Identity=23.9747634069401, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357907, Length=221, Percent_Identity=31.2217194570136, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641565, Length=201, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 52956; Mature: 52956

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALPPIRIETRGLTRLFGTFVANDDISIQIHRGSIHAFLGGNGAGKTTLMRMLQGLCQP
CCCCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCC
TGGDILIDGQRVVLSSPQVAFRHGIGMVHQEFNLVSGLTLLENLVLGAEPVGRSGVVDWK
CCCCEEECCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
AARCAAEELARTIGVAVDWDATVSATPLHVLQVIEILRILYRGADILILDEPSAVLAHEQ
HHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
VASLLGILRRLRDNGRTILFISHRLNEVLDIADRITVLREGRHQSTIERISADRNLLMRE
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
VTGEDIVFTAPAEQVAGEVCLTARGVCVTDDSGVVRTRDISLDIRAGEILAITGAPGRGQ
CCCCCEEEECCHHHHCCCEEEEECCEEEECCCCEEEEEEEEEEEECCEEEEEECCCCCCH
IELLEVLAGLRRAAAGTISIDGRNITACSVTARRRAGIRYLSADRATESLCRDMSIRDNA
HHHHHHHHHHHHHCCCEEEECCCEEEEEEEEHHHHCCCEEEEHHHHHHHHHHCCCCCCCC
IAGRHRVRPFSRLRILDHAAIRAHTAALLDRFSVRRPADDLPVGVLSGGNQQRVALAREL
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHC
DGASRILLVAQPTRGVDLAGIAFIHGVLRDFVESGGAVVMVSEDRDEVEALASRVLQLRE
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH
DGRLLPVHAA
CCCEEEEECC
>Mature Secondary Structure
MNALPPIRIETRGLTRLFGTFVANDDISIQIHRGSIHAFLGGNGAGKTTLMRMLQGLCQP
CCCCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCC
TGGDILIDGQRVVLSSPQVAFRHGIGMVHQEFNLVSGLTLLENLVLGAEPVGRSGVVDWK
CCCCEEECCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
AARCAAEELARTIGVAVDWDATVSATPLHVLQVIEILRILYRGADILILDEPSAVLAHEQ
HHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
VASLLGILRRLRDNGRTILFISHRLNEVLDIADRITVLREGRHQSTIERISADRNLLMRE
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
VTGEDIVFTAPAEQVAGEVCLTARGVCVTDDSGVVRTRDISLDIRAGEILAITGAPGRGQ
CCCCCEEEECCHHHHCCCEEEEECCEEEECCCCEEEEEEEEEEEECCEEEEEECCCCCCH
IELLEVLAGLRRAAAGTISIDGRNITACSVTARRRAGIRYLSADRATESLCRDMSIRDNA
HHHHHHHHHHHHHCCCEEEECCCEEEEEEEEHHHHCCCEEEEHHHHHHHHHHCCCCCCCC
IAGRHRVRPFSRLRILDHAAIRAHTAALLDRFSVRRPADDLPVGVLSGGNQQRVALAREL
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHC
DGASRILLVAQPTRGVDLAGIAFIHGVLRDFVESGGAVVMVSEDRDEVEALASRVLQLRE
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH
DGRLLPVHAA
CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]