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The map label for this gene is yphB [H]

Identifier: 162147889

GI number: 162147889

Start: 2153568

End: 2154467

Strand: Reverse

Name: yphB [H]

Synonym: GDI_2105

Alternate gene names: 162147889

Gene position: 2154467-2153568 (Counterclockwise)

Preceding gene: 162147890

Following gene: 162147888

Centisome position: 54.62

GC content: 64.22

Gene sequence:

>900_bases
ATGATCGAACTGACTGCCGGAACGGGCCGGCTGGGATTGCTGCCCGAACTGGGGGGTGCCGTCGCCTACTGGAAGAGCCG
CGACATCTGCGTGCTGCACGCCGTCAGCGACGCCAACCTGCTGGCGCAGCGGGGCCGGGCGGTTTCGGGCTATCCGCTGG
TTCCGTTCTCCAATCGCGTGGCCAACGGCCATTTCCGGTTCGAGGGTACCGAGTATCGGATGAAGCCCAATTTTGGCGGC
GAGTCCAATACCCTCCACGGGAATGGCTGGGAGCATCCGTGGCAACTGGAATTGCTGGCCGACGACAGTGCGACACTGGT
GCTGGACTGGCATCCCCCCTACGAGCAGGTGACGGGCCAGGTGATCGGCCAGTGGCCCTTCGCCTATCGTGCGCAACTGC
GCTTCGACCTGCGCGAGGACAGCCTGTCGATCGGTATGCTGATCGAAAACACCGACCTGCGGTCCCAGCCGGTGGGAATG
GGTTTCCACCCCTATTTTCCCCGGCGCAGCGGCCTGCAACTGGGCTTTGCTGCCGAAACGGTCTGGACGAACGACGAACA
CCACCTGCCCGCATTGCGCGTGCCGGCGACGGGGGACTGGTCGTTCGAGCATATGCATGCCGTCACCACGCAGGATATCG
ACAATTGCTATGCGGGGTGGGAACGCGCGGCCTTCCTGCGCTGGCCGAACGAAGGGCTGGCCCTGACGATCGAGGCCGAC
GATCCGTTCCGTCACCTGGTCCTGTTCACCCCGCCGGACAAACCCTTCATCGCCGTCGAGCCGGTGACGAACATGAACGA
CGCGTTCAACCATTCCGGCGTCATCGATCGGGGCGTGCATGTCCTGGCCCCCGGCGCAAAGCTGGAGGGACATATCCGCA
TCGCCCTGATGGCCTGTTAG

Upstream 100 bases:

>100_bases
TATGATCCGTCCAAGGGGCGTGGACCGCGCCGCCGAGGTGGGGGACGATAGAAAGACGTCGTCACGGCAACGCAACCGGC
GACGCGGGAGAACGAACGGA

Downstream 100 bases:

>100_bases
GATGTTGGTCCGGAAACGCGCGCTGGTGGCGATCCGACGCGTGTTTCCTGCGCTTCGTGGCGCTCGCGCTCACCAGCCCA
CGTTTCCGGACCAACATCGA

Product: aldose 1-epimerase (mutarotase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MIELTAGTGRLGLLPELGGAVAYWKSRDICVLHAVSDANLLAQRGRAVSGYPLVPFSNRVANGHFRFEGTEYRMKPNFGG
ESNTLHGNGWEHPWQLELLADDSATLVLDWHPPYEQVTGQVIGQWPFAYRAQLRFDLREDSLSIGMLIENTDLRSQPVGM
GFHPYFPRRSGLQLGFAAETVWTNDEHHLPALRVPATGDWSFEHMHAVTTQDIDNCYAGWERAAFLRWPNEGLALTIEAD
DPFRHLVLFTPPDKPFIAVEPVTNMNDAFNHSGVIDRGVHVLAPGAKLEGHIRIALMAC

Sequences:

>Translated_299_residues
MIELTAGTGRLGLLPELGGAVAYWKSRDICVLHAVSDANLLAQRGRAVSGYPLVPFSNRVANGHFRFEGTEYRMKPNFGG
ESNTLHGNGWEHPWQLELLADDSATLVLDWHPPYEQVTGQVIGQWPFAYRAQLRFDLREDSLSIGMLIENTDLRSQPVGM
GFHPYFPRRSGLQLGFAAETVWTNDEHHLPALRVPATGDWSFEHMHAVTTQDIDNCYAGWERAAFLRWPNEGLALTIEAD
DPFRHLVLFTPPDKPFIAVEPVTNMNDAFNHSGVIDRGVHVLAPGAKLEGHIRIALMAC
>Mature_299_residues
MIELTAGTGRLGLLPELGGAVAYWKSRDICVLHAVSDANLLAQRGRAVSGYPLVPFSNRVANGHFRFEGTEYRMKPNFGG
ESNTLHGNGWEHPWQLELLADDSATLVLDWHPPYEQVTGQVIGQWPFAYRAQLRFDLREDSLSIGMLIENTDLRSQPVGM
GFHPYFPRRSGLQLGFAAETVWTNDEHHLPALRVPATGDWSFEHMHAVTTQDIDNCYAGWERAAFLRWPNEGLALTIEAD
DPFRHLVLFTPPDKPFIAVEPVTNMNDAFNHSGVIDRGVHVLAPGAKLEGHIRIALMAC

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=257, Percent_Identity=29.5719844357977, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790311, Length=235, Percent_Identity=25.9574468085106, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 33373; Mature: 33373

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELTAGTGRLGLLPELGGAVAYWKSRDICVLHAVSDANLLAQRGRAVSGYPLVPFSNRV
CEEEECCCCCEECCHHCCCEEEEECCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCC
ANGHFRFEGTEYRMKPNFGGESNTLHGNGWEHPWQLELLADDSATLVLDWHPPYEQVTGQ
CCCEEEECCCEEEECCCCCCCCCEECCCCCCCCEEEEEEECCCEEEEEECCCCHHHHCCE
VIGQWPFAYRAQLRFDLREDSLSIGMLIENTDLRSQPVGMGFHPYFPRRSGLQLGFAAET
EEECCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
VWTNDEHHLPALRVPATGDWSFEHMHAVTTQDIDNCYAGWERAAFLRWPNEGLALTIEAD
EECCCCCCCCEEECCCCCCCCHHHEEEECHHCHHHHHCCCCEEEEEEECCCCEEEEEECC
DPFRHLVLFTPPDKPFIAVEPVTNMNDAFNHSGVIDRGVHVLAPGAKLEGHIRIALMAC
CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MIELTAGTGRLGLLPELGGAVAYWKSRDICVLHAVSDANLLAQRGRAVSGYPLVPFSNRV
CEEEECCCCCEECCHHCCCEEEEECCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCC
ANGHFRFEGTEYRMKPNFGGESNTLHGNGWEHPWQLELLADDSATLVLDWHPPYEQVTGQ
CCCEEEECCCEEEECCCCCCCCCEECCCCCCCCEEEEEEECCCEEEEEECCCCHHHHCCE
VIGQWPFAYRAQLRFDLREDSLSIGMLIENTDLRSQPVGMGFHPYFPRRSGLQLGFAAET
EEECCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
VWTNDEHHLPALRVPATGDWSFEHMHAVTTQDIDNCYAGWERAAFLRWPNEGLALTIEAD
EECCCCCCCCEEECCCCCCCCHHHEEEECHHCHHHHHCCCCEEEEEEECCCCEEEEEECC
DPFRHLVLFTPPDKPFIAVEPVTNMNDAFNHSGVIDRGVHVLAPGAKLEGHIRIALMAC
CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]