| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is hyuC [H]
Identifier: 162147789
GI number: 162147789
Start: 2042965
End: 2044299
Strand: Direct
Name: hyuC [H]
Synonym: GDI_2005
Alternate gene names: 162147789
Gene position: 2042965-2044299 (Clockwise)
Preceding gene: 162147775
Following gene: 162147790
Centisome position: 51.8
GC content: 68.46
Gene sequence:
>1335_bases GTGAATTTCGGAGATCAGCAGGCCACTAAAATATTGATTTGGCTGGTGTCCAGCAGGAGGAACAGGATGAGCGGCACGGG TGGTCTTCGCAAGGGCGACAACATCACCGTGAATGGCGCGGCGTTATGGGACGACATCCTGCACACCGCCCGGTTCGGCG GCACGCCCAAGGGCGGGATCAGGCGCCTGACGCTGACCGAGGAAGACCGGCTGGTCCGCGCGTGGTTCGAGGCCGCCTGC CGGCAGGTCGGCTGCACCGTCACCCATGATTCGCTGGGCAACCAGTTCGCCCGCCGCCCGGGGCGCGACGACAGCCTGCC GCCGATCACGATCGGCAGCCATCTGGATACCCAGCCCACCGGCGGCAAGTTCGACGGGATCGTCGGCGTGCTGGGCGGCC TGGCCGTGCTGCGGGCGCTGCATGCGTCGGGCCACGAGACCCGGCATCCGATCGAACTGATCAACTGGACGAACGAGGAA GGGGCGCGCTTCGCCCCGGCCATGCTGGCCTCGGGCGTGTTCGCCGGCGTGTTCACCGAACAGGAAGCCCTGGACAAGAC CGACCGCGCGGGAATCCGTTTCGAGGACGCGCTGGTCGGAATCGGCTATCGCGGCAGCGAGCCCTGCGGGCAGCATCCGG TGTCGGCCTATTTCGAACTGCATATCGAGCAGGGACCGATCCTGGAAGCCCAGCACAAGACGATCGGCATCGTGACCGGC GTGCAGGGCATACGGTGGTACGAAGTCACGCTGACCGGCCGCGATTCCCATGCCGGCAGCACGCCCATGACGATGCGCGC CGACGCCCTGCTGGCCGCCGCCCGGATGATCGAGGCGGTGAACCAGGTGGCCCTGGCCTTTGGTCCGGACGCGGTGGGCA CGGTCGGCCTGATCGAAAGCCGCCCCAACAGCCGCAACGTGGTTCCGGGCGAGGTCTTCTTCACCATCGACCTGCGCCAC CCGGACGACACGGTGGTGGTGCGAATGGAGGAGGCGATGCGGGCGAAGGTCGCGGCCATCGCCGCCGAATCCGGCGTCGG CCTGGCGCTGGACTGCGTGTGGGATTCCCCGGCGGTGCATTTCGATCCGGCGTGCATCGGCGCCGTCCGCCGGGCGGCGG AATCGTTCGGCTATCCGGCACGCGACATCGTATCGGGCGCGGGCCACGACGCGGCCTATCTGGCCCGGGTGACGCCGACC ACCATGATCTTCGTCCCCTGCGCGGGCGGCCTGAGCCATAACGAGGCCGAAAGCGCCGAACCCGGCGACGTTACCGCCGG GGCGAACGTGCTGCTGCGGGCGGTGCTGGACGCCGATGCACGGCTGGATGCCTGA
Upstream 100 bases:
>100_bases TGTGTCACAAGACGCGGGCGGGCATTCACGGTTTTGCGGCTTGCGCGCCGGGCGGATTGCCGAAAACGTAACGCTGGTGT CCTGCCTCCGAAATTAATAT
Downstream 100 bases:
>100_bases TCGGGCAGTCGAAGAGGCCTCGAAGAATCATCTGTCCAGCGCGGCGTCCTTGTTCCATCCTCGTGACGATTTCGGAACCG TGACAGGGTTCTCTGTGCCA
Product: N-carbamoyl-L-amino acid amidohydrolase
Products: beta-alanine; CO2; NH3
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGIRRLTLTEEDRLVRAWFEAAC RQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPTGGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEE GARFAPAMLASGVFAGVFTEQEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIESRPNSRNVVPGEVFFTIDLRH PDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVHFDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPT TMIFVPCAGGLSHNEAESAEPGDVTAGANVLLRAVLDADARLDA
Sequences:
>Translated_444_residues MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGIRRLTLTEEDRLVRAWFEAAC RQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPTGGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEE GARFAPAMLASGVFAGVFTEQEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIESRPNSRNVVPGEVFFTIDLRH PDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVHFDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPT TMIFVPCAGGLSHNEAESAEPGDVTAGANVLLRAVLDADARLDA >Mature_444_residues MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGIRRLTLTEEDRLVRAWFEAAC RQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPTGGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEE GARFAPAMLASGVFAGVFTEQEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIESRPNSRNVVPGEVFFTIDLRH PDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVHFDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPT TMIFVPCAGGLSHNEAESAEPGDVTAGANVLLRAVLDADARLDA
Specific function: Converts N-carbamyl-L-amino acids to L-amino acids [H]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI1786726, Length=384, Percent_Identity=32.5520833333333, Blast_Score=203, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010158 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: 3.5.1.6
Molecular weight: Translated: 47268; Mature: 47268
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGI CCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCE RRLTLTEEDRLVRAWFEAACRQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPT EEEEECCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC GGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEEGARFAPAMLASGVFAGVFTE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC QEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG HHHHCCHHCCCCEEEHEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCEEEEEEC VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIES CCCEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC RPNSRNVVPGEVFFTIDLRHPDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVH CCCCCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCE FDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPTTMIFVPCAGGLSHNEAESAE ECHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC PGDVTAGANVLLRAVLDADARLDA CCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGI CCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCE RRLTLTEEDRLVRAWFEAACRQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPT EEEEECCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC GGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEEGARFAPAMLASGVFAGVFTE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC QEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG HHHHCCHHCCCCEEEHEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCEEEEEEC VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIES CCCEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC RPNSRNVVPGEVFFTIDLRHPDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVH CCCCCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCE FDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPTTMIFVPCAGGLSHNEAESAE ECHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC PGDVTAGANVLLRAVLDADARLDA CCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-carbamoyl-beta-alanine; H2O
Specific reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]