Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is pgl [H]

Identifier: 162147691

GI number: 162147691

Start: 1941505

End: 1942749

Strand: Direct

Name: pgl [H]

Synonym: GDI_1907

Alternate gene names: 162147691

Gene position: 1941505-1942749 (Clockwise)

Preceding gene: 162147690

Following gene: 162147693

Centisome position: 49.22

GC content: 65.38

Gene sequence:

>1245_bases
ATGACGATGCCCTTTTCGCGACGCAATCTGCTCCTGGCGCTGGCGGCTTCCGGTACCGCCCCGCTGGCCAGTTCCCTGAC
CGGCCCGCGACCGGCGCGCGCCGCGATCCCGGCCATGTCGCGGACGCTGTGCTATATCGGCGGATACAACAAGCACGCGC
CTCCGGGCGGGGCCGGGAACGGGCAGGGCATCGCAATTTTCGAAATGAACCGCGTGACGGGCGGGCTCATTCCCGTCAGC
ACGTTCATGGACATCGCCAGCCCGTCCTTCATCACGATGTCGGCCGATAGCCGTTTCCTGTACGCGCTCAGCGAAATCGA
CGATTTCAACGCCGATCACGACGGCAGCGTCACCGCCTTTTCCGTGGACCGGACGTCCGGCGAACTGAACCGGCTGAACG
TCGTCTCGTCCGGCGGTGCCGTGCCGGCGCATCTCAGCGTCCATCGGGCCGGGCATCATGTCCTGGTCGCCAACTATGTC
GGCGGCAGTGTCGGCGTCCTGCCCATCCGCCCCGATGGCAGCCTGGGTGAACCCACCGACGTCGTGCACAATACGGGGCC
GCATATGCCCGAACGCGCCGAGGACAATCCGCCCGGCAATTTCGCGATCAGCGACCATTCCGGTTCGCACGTGCATATGG
TCGCCAGCGATCCGTCGGGCCGCTTCGTCGTGGCCTGCGATGCGGGGCTGGACCGCGTCTATGTCTGGACGCTGGATCTG
GCGAGCGGCAAGCTGCGGCCCGCCGCCACGCCGTTCATCAACCTGATCCCGGGCTCCGCCCCCCGCCATTTCGCGTTCAG
CAAGGACGGACGGACGATCTATATCCTGTGCGAACAGGATTCGAAGGTCGTCGTCGCATCGTTCGATCCGCGCACCGGCG
CGCTGGTCCCACAGCAGAAGGTCAGCACCGTGACCTCCTATTTCCAGGGCAGCACGCTGGCGGCGGAAATCCTGATCTCG
CCGAACGGGCGGTATGTCTATGCCTCGAACCGGCTGGGCGATTCGCTGGCGATCTTCCGGGTCGGCCCCGACGGATCGCT
GACCCTGATCGACGAGGTCTGGATGCATGCCGACTACGGACGGGCGATGGTATTCGACCCCTCGGGCACGTTCCTGTATT
GCGCCAACCAGCGCAGCGATTCGGTGACGTCCTTCCGCGTCAACCCCGAGACCGGCGCGCTGGATTTCAACTGGCACTTC
ACCGCGATCGGCAGCCCGACCACGTTTGCCTTTCTCCAGATCTGA

Upstream 100 bases:

>100_bases
ACATACCTGGACCCGCTATACCGGCACGATCGGCCAGCGCTGCCAGATGCCGTGATGCGTAATCGCTGCCCGACACGATA
AACAACGAGGCACAGCAAGA

Downstream 100 bases:

>100_bases
ATCTCGGTCCGCAAACGCGCGCTGGTGGCGATCCGACGCGCGTCTGCTGCGCTCCACTGCGTTCCGCTCCCGCTCACTAG
CCCACGTTTCCGAACCGAAA

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGNGQGIAIFEMNRVTGGLIPVS
TFMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAFSVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYV
GGSVGVLPIRPDGSLGEPTDVVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDL
ASGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQKVSTVTSYFQGSTLAAEILIS
PNGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYGRAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHF
TAIGSPTTFAFLQI

Sequences:

>Translated_414_residues
MTMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGNGQGIAIFEMNRVTGGLIPVS
TFMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAFSVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYV
GGSVGVLPIRPDGSLGEPTDVVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDL
ASGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQKVSTVTSYFQGSTLAAEILIS
PNGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYGRAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHF
TAIGSPTTFAFLQI
>Mature_413_residues
TMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGNGQGIAIFEMNRVTGGLIPVST
FMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAFSVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYVG
GSVGVLPIRPDGSLGEPTDVVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDLA
SGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQKVSTVTSYFQGSTLAAEILISP
NGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYGRAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHFT
AIGSPTTFAFLQI

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=334, Percent_Identity=23.3532934131737, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 44000; Mature: 43869

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGN
CCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHCCHHHCEEEEECCCCCCCCCCCCCC
GQGIAIFEMNRVTGGLIPVSTFMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAF
CCEEEEEEECCCCCCEEEHHHHHHHCCCCEEEEECCCEEEEEEEHHCCCCCCCCCCEEEE
SVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYVGGSVGVLPIRPDGSLGEPTD
EEECCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCHH
VVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDL
HHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEEE
ASGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQK
CCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCHHH
VSTVTSYFQGSTLAAEILISPNGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYG
HHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCEEEEEHHHEECCCC
RAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHFTAIGSPTTFAFLQI
CEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEC
>Mature Secondary Structure 
TMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGN
CCCCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHCCHHHCEEEEECCCCCCCCCCCCCC
GQGIAIFEMNRVTGGLIPVSTFMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAF
CCEEEEEEECCCCCCEEEHHHHHHHCCCCEEEEECCCEEEEEEEHHCCCCCCCCCCEEEE
SVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYVGGSVGVLPIRPDGSLGEPTD
EEECCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCHH
VVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDL
HHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEEE
ASGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQK
CCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCHHH
VSTVTSYFQGSTLAAEILISPNGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYG
HHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCEEEEEHHHEECCCC
RAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHFTAIGSPTTFAFLQI
CEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]