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The map label for this gene is cycM [H]

Identifier: 162147660

GI number: 162147660

Start: 1911384

End: 1911911

Strand: Reverse

Name: cycM [H]

Synonym: GDI_1876

Alternate gene names: 162147660

Gene position: 1911911-1911384 (Counterclockwise)

Preceding gene: 162147665

Following gene: 162147659

Centisome position: 48.47

GC content: 73.3

Gene sequence:

>528_bases
ATGGACAGCAAGGACGTCAACCGTATCGGAGCCGCCATCCTGGTGGCCGCCCTGGCGCTGGGGGCAAGTGCCTGGGCCGG
CTATGTGGCCATTCCGTCCGGCACGCCCGGACACCCCGCCTTCGTCCTGCCCCAGCCGGCGGTGGCGGCCGATGCCTCCG
GTCCGGCGGCTGCCCCGCCCTCGATCGCCGATGCCGTCGCCCACGCCGACCCCAAGGCCGGGCAGGCCCTGGCGGCACGC
ATGTGCGCGATGTGCCACAGCTTCGCCAAGGACGGACCGGCGATGATCGGCCCGGACCTGTACGGCGTGCCGGGGACCGC
GATCGGCGACATGCCGGGCTATGAATTTTCGGCGGCGCTGGCGGCGCACAAGGCCGAGCGCTGGACCGACGACGCCCTGT
CGTCCTGGCTGGAAGGGCCGGGCCGCTTCGCCCCCGGCACCCGCATGGCCTTCCCCGGCGTGGCGGATGCCGCCGACCGG
GCCGCGATCATCGCCTTCCTGCACACGCTTTCGGACGGAGCCCACTGA

Upstream 100 bases:

>100_bases
CGGAACGATCCGGCAATGCTTCACACAAGGCGGCCCGCAGTCTAGTGTCCTGCCTCCGAAATTCATAGGCGATTTTCGGA
GAAGGAGCATCGAGGCCTGG

Downstream 100 bases:

>100_bases
CCATGTCCCTGGCCACGCCCCTGCCCCCGCATGACGCCGACCGGCTGGTCGCGGCGGCCATGGCCGCGGCCGACGTCGCG
GGCTGCGTCATCCGCCCGTT

Product: cytochrome c-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MDSKDVNRIGAAILVAALALGASAWAGYVAIPSGTPGHPAFVLPQPAVAADASGPAAAPPSIADAVAHADPKAGQALAAR
MCAMCHSFAKDGPAMIGPDLYGVPGTAIGDMPGYEFSAALAAHKAERWTDDALSSWLEGPGRFAPGTRMAFPGVADAADR
AAIIAFLHTLSDGAH

Sequences:

>Translated_175_residues
MDSKDVNRIGAAILVAALALGASAWAGYVAIPSGTPGHPAFVLPQPAVAADASGPAAAPPSIADAVAHADPKAGQALAAR
MCAMCHSFAKDGPAMIGPDLYGVPGTAIGDMPGYEFSAALAAHKAERWTDDALSSWLEGPGRFAPGTRMAFPGVADAADR
AAIIAFLHTLSDGAH
>Mature_175_residues
MDSKDVNRIGAAILVAALALGASAWAGYVAIPSGTPGHPAFVLPQPAVAADASGPAAAPPSIADAVAHADPKAGQALAAR
MCAMCHSFAKDGPAMIGPDLYGVPGTAIGDMPGYEFSAALAAHKAERWTDDALSSWLEGPGRFAPGTRMAFPGVADAADR
AAIIAFLHTLSDGAH

Specific function: May be involved in electron transfer from bc1 complex to aa3 [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=103, Percent_Identity=34.9514563106796, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6320796, Length=96, Percent_Identity=34.375, Blast_Score=83, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322508, Length=96, Percent_Identity=35.4166666666667, Blast_Score=77, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17137204, Length=100, Percent_Identity=36, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI17137228, Length=100, Percent_Identity=34, Blast_Score=77, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 17497; Mature: 17497

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKDVNRIGAAILVAALALGASAWAGYVAIPSGTPGHPAFVLPQPAVAADASGPAAAPP
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEECCCCCHHCCCCCCCCCCC
SIADAVAHADPKAGQALAARMCAMCHSFAKDGPAMIGPDLYGVPGTAIGDMPGYEFSAAL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHH
AAHKAERWTDDALSSWLEGPGRFAPGTRMAFPGVADAADRAAIIAFLHTLSDGAH
HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSKDVNRIGAAILVAALALGASAWAGYVAIPSGTPGHPAFVLPQPAVAADASGPAAAPP
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEECCCCCHHCCCCCCCCCCC
SIADAVAHADPKAGQALAARMCAMCHSFAKDGPAMIGPDLYGVPGTAIGDMPGYEFSAAL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHH
AAHKAERWTDDALSSWLEGPGRFAPGTRMAFPGVADAADRAAIIAFLHTLSDGAH
HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]