BacMap

Definition	Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession	NC_010125
Length	3,944,163

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The map label for this gene is yjgI [H]

Identifier: 162147517

GI number: 162147517

Start: 1753853

End: 1754584

Strand: Reverse

Name: yjgI [H]

Synonym: GDI_1733

Alternate gene names: 162147517

Gene position: 1754584-1753853 (Counterclockwise)

Preceding gene: 162147519

Following gene: 162147516

Centisome position: 44.49

GC content: 70.63

Gene sequence:

>732_bases
ATGACCCAGCGTGTGGCTCTTGTCACCGGGGGAAGCCGGGGTATCGGCGCGGCCATCGCCCGGAAACTGGCCGAGGACGG
CTTTGACATCGCCCTGACCTACGCCAGCAACGCCACGGCGGCGGCCCAGGTCGTCCAGCAGGTCGAGGCGGCGGGACGCA
AGGGTGTGGCCATCAAGGCCGATGGCGGGACGACCGACGGCAACATCGCCGCCGTGCGCGACACCGTGAAGGCCCTCGGC
CGGCTGGACGTGCTGGTCTGCAACGCCGGGATGTATCCCTACGGCCCGATCGGCGAGGCGACGGTGGAGCAGATCGAAAG
GACGCTGAACCTGAACCTGCGCGCCGTGATGGTGGAAACCATGGAAGCCGTGGCGCACATGACGCACGGCGGCCGGCTGA
TCTATATCGGCTCGGCCTTCGGCGCGCGGGCGCCCTTCCCCGGCATCTCGCTCTATGCCGCCACCAAGGCGGCGCTGTGC
GGCTTCGCGCGCGGCGTGGCGCGGGACCTCGGGCCCCGCGGCATCACCGCCAACGTGGTGGAACCCGGCCCCATCGATAC
GGAACTGAACCCCGCCACGGGCCAGGCCGCCGACATGCTGCGCAGCTTCACCGCCACCGGCGCCTATGGCGCGGTATCCG
ACATCGCCGGACTGGTGTCCTTCCTGGCCGGCCCGCAGGCCGGTTACATCACCGGGGCGGCGCTGGCGGTCGATGGCGGC
CTGACAGCGTAA

Upstream 100 bases:

>100_bases
GCGCGGCGCCGAAGCCCTGATCCGCGCCCGGCCGGGTTGCCCCACGGGGGAACGTCCGGCATGTGGTGGGCAGGTTCCAT
CAAGCCAAGGAGTACGATCC

Downstream 100 bases:

>100_bases
CCGGACGAACCGGAAGCGGCCGCCCTGGGTGGGCGGCCGCTTTCGTGATCATCGCGCAATGGAATCGCGCACCGTTCGAT
GATAAAGGGTCGATCGACCA

Product: acetoin(diacetyl) reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTQRVALVTGGSRGIGAAIARKLAEDGFDIALTYASNATAAAQVVQQVEAAGRKGVAIKADGGTTDGNIAAVRDTVKALG
RLDVLVCNAGMYPYGPIGEATVEQIERTLNLNLRAVMVETMEAVAHMTHGGRLIYIGSAFGARAPFPGISLYAATKAALC
GFARGVARDLGPRGITANVVEPGPIDTELNPATGQAADMLRSFTATGAYGAVSDIAGLVSFLAGPQAGYITGAALAVDGG
LTA

Sequences:

>Translated_243_residues
MTQRVALVTGGSRGIGAAIARKLAEDGFDIALTYASNATAAAQVVQQVEAAGRKGVAIKADGGTTDGNIAAVRDTVKALG
RLDVLVCNAGMYPYGPIGEATVEQIERTLNLNLRAVMVETMEAVAHMTHGGRLIYIGSAFGARAPFPGISLYAATKAALC
GFARGVARDLGPRGITANVVEPGPIDTELNPATGQAADMLRSFTATGAYGAVSDIAGLVSFLAGPQAGYITGAALAVDGG
LTA
>Mature_242_residues
TQRVALVTGGSRGIGAAIARKLAEDGFDIALTYASNATAAAQVVQQVEAAGRKGVAIKADGGTTDGNIAAVRDTVKALGR
LDVLVCNAGMYPYGPIGEATVEQIERTLNLNLRAVMVETMEAVAHMTHGGRLIYIGSAFGARAPFPGISLYAATKAALCG
FARGVARDLGPRGITANVVEPGPIDTELNPATGQAADMLRSFTATGAYGAVSDIAGLVSFLAGPQAGYITGAALAVDGGL
TA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=33.8775510204082, Blast_Score=115, Evalue=3e-26,
Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=29.2181069958848, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI40254992, Length=243, Percent_Identity=31.6872427983539, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=28.8, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=31.0756972111554, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=32.7868852459016, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=28.7958115183246, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=28.4552845528455, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=29.718875502008, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI66933014, Length=171, Percent_Identity=29.2397660818713, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=25.390625, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=44.4444444444444, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1789378, Length=245, Percent_Identity=35.1020408163265, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=37.7049180327869, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=31.4516129032258, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=31.0756972111554, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=31.4285714285714, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=26.7716535433071, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI87082160, Length=251, Percent_Identity=28.6852589641434, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=27.9166666666667, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=29.9180327868852, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786701, Length=197, Percent_Identity=30.4568527918782, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=29.0196078431373, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=32.3886639676113, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=32.5581395348837, Blast_Score=106, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=33.4630350194552, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=31.3492063492063, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17531453, Length=256, Percent_Identity=32.8125, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17562908, Length=258, Percent_Identity=31.3953488372093, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=29.2490118577075, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=30.6201550387597, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=29.6, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=31.25, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17560220, Length=256, Percent_Identity=30.46875, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=31.8181818181818, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=27.5862068965517, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=30, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=260, Percent_Identity=28.8461538461538, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=29.7959183673469, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=29.7709923664122, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=29.6747967479675, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=30.46875, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=253, Percent_Identity=30.0395256916996, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=257, Percent_Identity=28.4046692607004, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=256, Percent_Identity=27.34375, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115534694, Length=255, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=253, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322227, Length=195, Percent_Identity=27.6923076923077, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=4e-26,
Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=34.2741935483871, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=33.469387755102, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=28.4552845528455, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644337, Length=178, Percent_Identity=33.1460674157303, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=29.1497975708502, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=26.2295081967213, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007236, Length=211, Percent_Identity=30.3317535545024, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24641232, Length=207, Percent_Identity=29.4685990338164, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24536; Mature: 24405

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00061 ADH_SHORT ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRVALVTGGSRGIGAAIARKLAEDGFDIALTYASNATAAAQVVQQVEAAGRKGVAIKA
CCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEE
DGGTTDGNIAAVRDTVKALGRLDVLVCNAGMYPYGPIGEATVEQIERTLNLNLRAVMVET
CCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
MEAVAHMTHGGRLIYIGSAFGARAPFPGISLYAATKAALCGFARGVARDLGPRGITANVV
HHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
EPGPIDTELNPATGQAADMLRSFTATGAYGAVSDIAGLVSFLAGPQAGYITGAALAVDGG
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEECEEEEECCC
LTA
CCC
>Mature Secondary Structure 
TQRVALVTGGSRGIGAAIARKLAEDGFDIALTYASNATAAAQVVQQVEAAGRKGVAIKA
CCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEE
DGGTTDGNIAAVRDTVKALGRLDVLVCNAGMYPYGPIGEATVEQIERTLNLNLRAVMVET
CCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
MEAVAHMTHGGRLIYIGSAFGARAPFPGISLYAATKAALCGFARGVARDLGPRGITANVV
HHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
EPGPIDTELNPATGQAADMLRSFTATGAYGAVSDIAGLVSFLAGPQAGYITGAALAVDGG
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEECEEEEECCC
LTA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]