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The map label for this gene is copB [H]

Identifier: 162147304

GI number: 162147304

Start: 1517384

End: 1518172

Strand: Direct

Name: copB [H]

Synonym: GDI_1509

Alternate gene names: 162147304

Gene position: 1517384-1518172 (Clockwise)

Preceding gene: 162147303

Following gene: 162147305

Centisome position: 38.47

GC content: 67.55

Gene sequence:

>789_bases
GTGACCCGGCGGCCCATCCTCGGTATCGCCGTCGCCCTGCTGGCGGCGGGCGCGCTGCCCGGCCAGGTCCGGGCGCAGGC
CATGCCGATGGCGCCGGCGGCCGGCACGGGGCAGGGGGCGCCGGTCGCCTATGTCAACGGCATCCCCCCGGTCATGGACC
ACATGACCTACATGCACGCGCTGCTGGATCAGTTCGAAGCCCGGTACGGCGCCGATGGCGGCCAGTTCCGATACGACGGG
CAGGCCTGGTACGGCACCGACTACGACAAGCTGTGGCTGAAATCCGAAGGCACGGTCGGCACGAACGGACAATTCGGCGA
TGGCGACCACGAGGCCCTGTACGATCGCGCCATCTCGCGCTATTTCGACGTCCAGACCGGGGTGCGCCTGGATATCGACA
ACGGCCCGACGCGTGCCTGGGGCGCGGTGGGCGTGGAAGGGCTCGCCCTCTATTTCTTCAATCTGGAAGCCACGTCCTAT
TTCAGCGACCGGGGTGCGGCGGGCCGCCTGCAAGGGTCGTACGACCTGCTGCTGACCAACCGCCTGATCCTGCAGCCGCA
GGTCGAAATGAATGTCTATTCCACCAACGACCGGGCCCGCGGCGCCGGGCGCGGCCTGTCCGACATCGATACCGGGCTGC
GGTTGCGCTACGAATGGCACCGCAAATTCGCGCCCTATCTGGGCGTGACGTACCACAGCACGTTCGACCAGGCCGCCAGC
ATGGCCCGCACGCGGGGGCAGCGCGTGCATGACCTGACTTTTGTCTTCGGAATCAGGGCCTGGTTCTGA

Upstream 100 bases:

>100_bases
TGAGCTATCTGGTCACGGCCGACGAACCCGGATTATGGGCCTATCACTGCCATCTGCTCTACCATATGGCAGTCGGCATG
TTCCGCACGGTGGTGGTGTC

Downstream 100 bases:

>100_bases
ACCACGCGGCCGATCATCCGCCACGATGGGCGGCCATCACGCCAGCCGAGGCAGAGTAGCGATGTTGCGAGTCCATGGAC
CAGATCCCCAGGGCCGCGTA

Product: copper resistance protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTRRPILGIAVALLAAGALPGQVRAQAMPMAPAAGTGQGAPVAYVNGIPPVMDHMTYMHALLDQFEARYGADGGQFRYDG
QAWYGTDYDKLWLKSEGTVGTNGQFGDGDHEALYDRAISRYFDVQTGVRLDIDNGPTRAWGAVGVEGLALYFFNLEATSY
FSDRGAAGRLQGSYDLLLTNRLILQPQVEMNVYSTNDRARGAGRGLSDIDTGLRLRYEWHRKFAPYLGVTYHSTFDQAAS
MARTRGQRVHDLTFVFGIRAWF

Sequences:

>Translated_262_residues
MTRRPILGIAVALLAAGALPGQVRAQAMPMAPAAGTGQGAPVAYVNGIPPVMDHMTYMHALLDQFEARYGADGGQFRYDG
QAWYGTDYDKLWLKSEGTVGTNGQFGDGDHEALYDRAISRYFDVQTGVRLDIDNGPTRAWGAVGVEGLALYFFNLEATSY
FSDRGAAGRLQGSYDLLLTNRLILQPQVEMNVYSTNDRARGAGRGLSDIDTGLRLRYEWHRKFAPYLGVTYHSTFDQAAS
MARTRGQRVHDLTFVFGIRAWF
>Mature_261_residues
TRRPILGIAVALLAAGALPGQVRAQAMPMAPAAGTGQGAPVAYVNGIPPVMDHMTYMHALLDQFEARYGADGGQFRYDGQ
AWYGTDYDKLWLKSEGTVGTNGQFGDGDHEALYDRAISRYFDVQTGVRLDIDNGPTRAWGAVGVEGLALYFFNLEATSYF
SDRGAAGRLQGSYDLLLTNRLILQPQVEMNVYSTNDRARGAGRGLSDIDTGLRLRYEWHRKFAPYLGVTYHSTFDQAASM
ARTRGQRVHDLTFVFGIRAWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 28921; Mature: 28790

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRPILGIAVALLAAGALPGQVRAQAMPMAPAAGTGQGAPVAYVNGIPPVMDHMTYMHA
CCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
LLDQFEARYGADGGQFRYDGQAWYGTDYDKLWLKSEGTVGTNGQFGDGDHEALYDRAISR
HHHHHHHHHCCCCCCEEECCEEEECCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
YFDVQTGVRLDIDNGPTRAWGAVGVEGLALYFFNLEATSYFSDRGAAGRLQGSYDLLLTN
HHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCHHEEECCCCCCCCCCCCEEEEEEC
RLILQPQVEMNVYSTNDRARGAGRGLSDIDTGLRLRYEWHRKFAPYLGVTYHSTFDQAAS
EEEECCCEEEEEEECCCCCCCCCCCHHHHCCCEEEEEHHHHCCCCHHCEEECCHHHHHHH
MARTRGQRVHDLTFVFGIRAWF
HHHHCCCHHHHHHHEEHHHHCC
>Mature Secondary Structure 
TRRPILGIAVALLAAGALPGQVRAQAMPMAPAAGTGQGAPVAYVNGIPPVMDHMTYMHA
CCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
LLDQFEARYGADGGQFRYDGQAWYGTDYDKLWLKSEGTVGTNGQFGDGDHEALYDRAISR
HHHHHHHHHCCCCCCEEECCEEEECCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
YFDVQTGVRLDIDNGPTRAWGAVGVEGLALYFFNLEATSYFSDRGAAGRLQGSYDLLLTN
HHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCHHEEECCCCCCCCCCCCEEEEEEC
RLILQPQVEMNVYSTNDRARGAGRGLSDIDTGLRLRYEWHRKFAPYLGVTYHSTFDQAAS
EEEECCCEEEEEEECCCCCCCCCCCHHHHCCCEEEEEHHHHCCCCHHCEEECCHHHHHHH
MARTRGQRVHDLTFVFGIRAWF
HHHHCCCHHHHHHHEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]