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The map label for this gene is ydhP [H]

Identifier: 162147305

GI number: 162147305

Start: 1518390

End: 1519565

Strand: Direct

Name: ydhP [H]

Synonym: GDI_1510

Alternate gene names: 162147305

Gene position: 1518390-1519565 (Clockwise)

Preceding gene: 162147304

Following gene: 162147311

Centisome position: 38.5

GC content: 66.07

Gene sequence:

>1176_bases
TTGTCGAAAGCCGAATATTCGTCCGGTCCTGCACTGTTGTCCCTGGCGTGCGGGGCATTCGCGATCGGGGTGACCGAGTT
TACACCCATGGGGTTGCTGCCCGTCCTGGCTGACGGGGTCCATGTCAGCGTGCCCAAGGCAGGCAGCCTGATCAGTGCCT
ATGCCTTCGGCGTGATGGGGGGCGCGCCTTTCGTCACCCTGCTGCTGGCGCGCTATCCGCGCAAATATGCGCTGATCGGG
CTGATGATCCTGTATGTAATCGGAAATCTGACGTCGGCGGCCAGTGCCGACTATGCGCAGTTGCTGTTGTCGCGGATCCT
GACCAGCATGGCGCACGGGGCGTTCTTCGGGTTGGGGGCCGTGGAGGCGGCAAGCCTGGTCGCGGCCAATCGCCGGGCCA
GTGCGGTGGCCAGCATGTTCATGGGGCTGACCGTCGCCAATATCTTCGGCGTGCCGGCGGCGACGTGGCTGGGCGATACG
TTGGGCTGGCGCAGCGCGTTCGCCGCCATTTCGGTGCTGGGGGCGATCGCGGTGGCGGCCCTGTCCCTCGCCCTTCCATT
GGCCGAGGCCGGCCCCAGGCCGGACGCAGCGGCCGAGATGAAGGCCATCATGCGCCCGAATGTGTTGATGGCACTGGGCG
TCACGGTGATTGGCGCCGGGGCGATGTTCGAACTCTACACCTATATCGTGCCGATGCTGGAGCATATCACCCGGGCGGGG
CCGGTCCTGACGACCCTGGCGCTGATGCTGATCGGCGTCGGCTTCAGCATCGGAAACGTCATCGGCGGCCGTGCGGCGGA
CCGGTCGCTGGCCGGGACATTGCTGACGTGCTTCCCGATCCTCGGCGTGATCATGCTGGTCTTTCCCTTCGCGGCCCAGA
CGCCAGCCGGTGCGCTGATCGGGGTGCTGCTATGGGGGACCGCCAGTTTTTCCCTGATGCCGGCCTTGCAGATGCGGACC
ATGCAGGCGGCGCACGATGCGCCGGGCCTGGCGTCGTCGGTCAATATCGGCGCGTTCAATCTGGGCAATGCCCTGGGGGC
GGCCTTGGGCGGAACGGTTCTGTCCCTGGGGTTCGGATATCCGATGGTTTCGGCTGCGGGACTGGGAATCAGCCTGCTTG
GTGTGGTGCTGGTTCTGCTGTCCCGTGCGGGGCGTCTGTCGCCGCAGGCCGGATAA

Upstream 100 bases:

>100_bases
CCGCCAATCCCGGGGCGGTTCAGTCAGCGATCACTGCCCGGCACAGGGCCCGCGGACTGCCTGGCCTCCAAATGAATCCG
AACAAGGAGAAGAGGTCGTT

Downstream 100 bases:

>100_bases
GGCGTCCGGAGGTCAGCAAGTGGCTTCTTCTTCTTCAGAAAAAGAGGCCACGTCCTTCACCGCCACACGCACCCGAAATT
CCCCCGGAACGGGTGATGCA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSKAEYSSGPALLSLACGAFAIGVTEFTPMGLLPVLADGVHVSVPKAGSLISAYAFGVMGGAPFVTLLLARYPRKYALIG
LMILYVIGNLTSAASADYAQLLLSRILTSMAHGAFFGLGAVEAASLVAANRRASAVASMFMGLTVANIFGVPAATWLGDT
LGWRSAFAAISVLGAIAVAALSLALPLAEAGPRPDAAAEMKAIMRPNVLMALGVTVIGAGAMFELYTYIVPMLEHITRAG
PVLTTLALMLIGVGFSIGNVIGGRAADRSLAGTLLTCFPILGVIMLVFPFAAQTPAGALIGVLLWGTASFSLMPALQMRT
MQAAHDAPGLASSVNIGAFNLGNALGAALGGTVLSLGFGYPMVSAAGLGISLLGVVLVLLSRAGRLSPQAG

Sequences:

>Translated_391_residues
MSKAEYSSGPALLSLACGAFAIGVTEFTPMGLLPVLADGVHVSVPKAGSLISAYAFGVMGGAPFVTLLLARYPRKYALIG
LMILYVIGNLTSAASADYAQLLLSRILTSMAHGAFFGLGAVEAASLVAANRRASAVASMFMGLTVANIFGVPAATWLGDT
LGWRSAFAAISVLGAIAVAALSLALPLAEAGPRPDAAAEMKAIMRPNVLMALGVTVIGAGAMFELYTYIVPMLEHITRAG
PVLTTLALMLIGVGFSIGNVIGGRAADRSLAGTLLTCFPILGVIMLVFPFAAQTPAGALIGVLLWGTASFSLMPALQMRT
MQAAHDAPGLASSVNIGAFNLGNALGAALGGTVLSLGFGYPMVSAAGLGISLLGVVLVLLSRAGRLSPQAG
>Mature_390_residues
SKAEYSSGPALLSLACGAFAIGVTEFTPMGLLPVLADGVHVSVPKAGSLISAYAFGVMGGAPFVTLLLARYPRKYALIGL
MILYVIGNLTSAASADYAQLLLSRILTSMAHGAFFGLGAVEAASLVAANRRASAVASMFMGLTVANIFGVPAATWLGDTL
GWRSAFAAISVLGAIAVAALSLALPLAEAGPRPDAAAEMKAIMRPNVLMALGVTVIGAGAMFELYTYIVPMLEHITRAGP
VLTTLALMLIGVGFSIGNVIGGRAADRSLAGTLLTCFPILGVIMLVFPFAAQTPAGALIGVLLWGTASFSLMPALQMRTM
QAAHDAPGLASSVNIGAFNLGNALGAALGGTVLSLGFGYPMVSAAGLGISLLGVVLVLLSRAGRLSPQAG

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=378, Percent_Identity=58.7301587301587, Blast_Score=380, Evalue=1e-107,
Organism=Escherichia coli, GI1786595, Length=355, Percent_Identity=33.2394366197183, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI145693198, Length=359, Percent_Identity=25.6267409470752, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787808, Length=358, Percent_Identity=27.3743016759777, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39525; Mature: 39393

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAEYSSGPALLSLACGAFAIGVTEFTPMGLLPVLADGVHVSVPKAGSLISAYAFGVMG
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCHHHHHHHHHHCC
GAPFVTLLLARYPRKYALIGLMILYVIGNLTSAASADYAQLLLSRILTSMAHGAFFGLGA
CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VEAASLVAANRRASAVASMFMGLTVANIFGVPAATWLGDTLGWRSAFAAISVLGAIAVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLALPLAEAGPRPDAAAEMKAIMRPNVLMALGVTVIGAGAMFELYTYIVPMLEHITRAG
HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PVLTTLALMLIGVGFSIGNVIGGRAADRSLAGTLLTCFPILGVIMLVFPFAAQTPAGALI
HHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GVLLWGTASFSLMPALQMRTMQAAHDAPGLASSVNIGAFNLGNALGAALGGTVLSLGFGY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PMVSAAGLGISLLGVVLVLLSRAGRLSPQAG
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SKAEYSSGPALLSLACGAFAIGVTEFTPMGLLPVLADGVHVSVPKAGSLISAYAFGVMG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCHHHHHHHHHHCC
GAPFVTLLLARYPRKYALIGLMILYVIGNLTSAASADYAQLLLSRILTSMAHGAFFGLGA
CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VEAASLVAANRRASAVASMFMGLTVANIFGVPAATWLGDTLGWRSAFAAISVLGAIAVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLALPLAEAGPRPDAAAEMKAIMRPNVLMALGVTVIGAGAMFELYTYIVPMLEHITRAG
HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PVLTTLALMLIGVGFSIGNVIGGRAADRSLAGTLLTCFPILGVIMLVFPFAAQTPAGALI
HHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GVLLWGTASFSLMPALQMRTMQAAHDAPGLASSVNIGAFNLGNALGAALGGTVLSLGFGY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PMVSAAGLGISLLGVVLVLLSRAGRLSPQAG
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]