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The map label for this gene is gidA

Identifier: 162147023

GI number: 162147023

Start: 1219801

End: 1221663

Strand: Reverse

Name: gidA

Synonym: GDI_1228

Alternate gene names: 162147023

Gene position: 1221663-1219801 (Counterclockwise)

Preceding gene: 162147024

Following gene: 162147022

Centisome position: 30.97

GC content: 70.91

Gene sequence:

>1863_bases
GTGACGACCGAGTACGATGTCATCGTCATAGGCGGAGGCCACGCAGGGTGCGAGGCCGCGGCGGCGGCGGCCCGGTGCGG
CGCGCGCACCCTGCTGCTGACCCATCGGCGGGACACGATCGGCGCCATGTCGTGCAACCCGGCCATCGGCGGCATCGGCA
AGGGCCACCTGGTGCGCGAAATCGATGCGCTGGACGGGTTGATGGCACGGGCCGCCGACCGGGCGGGAATTCATTTCAAG
CTGCTGAACCGCTCCAAGGGGCCGGCGGTGCATGGCCCCCGCGCGCAGGCCGACCGGTCGCTGTACCGCCGCGCGATCCA
GGATCTGCTGGCCGAAACCGCGAACCTGGACATCGCGGAAGGGGCAGCCGGCGACCTGATCGTGGACGATGCCGGCCAGG
CCGCCGGCGTGGTGTGCGAGGACGGGCGACAGTTCCGCGCCGGGGCGGTGGTACTGACCGCCGGCACCTTCTTGCGCGGC
GTGATCCATATCGGCCATGACAGCCATCCGGCCGGCCGGGTGGGGGAACCACCGGCCCACGCGCTGGGCGAGCGGCTCCA
GGCGCTGGGCCTGCCGATGGGGCGGCTGAAGACCGGCACCCCGGCCCGCCTGGACCGTACAAGCATCGACTGGGACAGCC
TGGCCGAGGACCGGGGCGACGCGGTGCCCGAACCCTTCAGCCGCCTGACGCAGGCGATCGACAACCCGCAACTATCCTGC
CGGATCACCGCCACCACGCCGCGGACCCATGCGCTGATCCGCGAACACCTGCATCTGTCGGCGGTCTATGGCGGGGCGAT
CGCCGGGCGCGGCCCGCGCTATTGTCCGTCGATCGAAGACAAGGTGGTGCGCTTCGCCGAACGCGACAGCCACCAGATCT
TCCTGGAACCCGAGGCCCTGCCGGGGAACGCGGGCGGCGACCTGGTCTATCCCAACGGCATTTCCACCAGCCTGCCGGCC
GATATTCAGGAACAGCTCATCCATTCCATTCCGGGACTGGAACGCTGCAGGATCGTCCGGCCCGGCTATGCGGTGGAATA
TGATTATGTCGATCCGCGCGCGCTGGCGCCGACGCTGGAGCTGACCGCGCTGCCGCGCCTGTTCCTGGCCGGGCAGATCA
ACGGCACGACGGGGTATGAGGAAGCCGGCGCCCAGGGGCTGCTGGCCGGCCTGAACGCCGCGCGGCGGGCCGGGGGCGGC
GAGGGGATCGCGATCGATCGCGGCGCCGCCTATCTGGGGGTGATGATCGACGACCTGGCGACGCAGGGCGTGTCCGAACC
GTACCGCATGTTCACCTCACGCGCCGAATATCGGCTGAGCCTGCGGGCGGACAATGCCGATTTGCGCCTGACCGGGCAGG
GGATCGGGTGGGGCTGCGTGGGCAGTGCGCGCGCGCACCTGTTCACGGCGGAACGTGACGCCATCGACACGGCGATGCAG
CGTGCGGGGGCCGAAAGCTTCCTGCCCGACGCATTGCAGCAGGCCGGGATCACGGTATCCGCCGACGGGCGCCGCCGCAC
CCTGCTGGACGTGCTGGCCACGGCCGCGACCCCGGATGCGATCGCGCGCATCGCCCCGTGGTTCGCCGCCCTGCCGTCGC
GCGTCAGCCGCCATGTCGAAACCGAAGCCCGGTATAGCGGCTATCTGGTCCGCCAGGCGCGCGAGATCCGGCAACTGGAG
GCCGAAACGCGCATCACCCTGCCGGCCGACCTGGATTACCGGCGCATCGGCGGGCTGAGCAGCGAGATGCAGGAACGCCT
GGCCGCCGCCCGCCCCGCCAGCTTCAGCGCGGCGCAGCGGGTGCCGGGGATCACGCCCTCGGCACTGATGGCACTGCTGT
CGCATGTGCGGCAGGTGGCATGA

Upstream 100 bases:

>100_bases
AGGATCTGCTCGATACGGTGTTCGGGCAGTTCTGTATCGGGAAGTGAAGGGGTGTTCTTTTTCTTCAGAAAAAGAAGCAC
TTAAACGGGGGCAGGCAAAC

Downstream 100 bases:

>100_bases
TGTTTCACGTGAAACCACAGGGGGGCAATGGCGTGCCGGATGCGCTGCGGGCGAAGCTGGACCGGTTCGCCGAAATCCTG
ACCCGCTGGAACAGCCGCAT

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MTTEYDVIVIGGGHAGCEAAAAAARCGARTLLLTHRRDTIGAMSCNPAIGGIGKGHLVREIDALDGLMARAADRAGIHFK
LLNRSKGPAVHGPRAQADRSLYRRAIQDLLAETANLDIAEGAAGDLIVDDAGQAAGVVCEDGRQFRAGAVVLTAGTFLRG
VIHIGHDSHPAGRVGEPPAHALGERLQALGLPMGRLKTGTPARLDRTSIDWDSLAEDRGDAVPEPFSRLTQAIDNPQLSC
RITATTPRTHALIREHLHLSAVYGGAIAGRGPRYCPSIEDKVVRFAERDSHQIFLEPEALPGNAGGDLVYPNGISTSLPA
DIQEQLIHSIPGLERCRIVRPGYAVEYDYVDPRALAPTLELTALPRLFLAGQINGTTGYEEAGAQGLLAGLNAARRAGGG
EGIAIDRGAAYLGVMIDDLATQGVSEPYRMFTSRAEYRLSLRADNADLRLTGQGIGWGCVGSARAHLFTAERDAIDTAMQ
RAGAESFLPDALQQAGITVSADGRRRTLLDVLATAATPDAIARIAPWFAALPSRVSRHVETEARYSGYLVRQAREIRQLE
AETRITLPADLDYRRIGGLSSEMQERLAAARPASFSAAQRVPGITPSALMALLSHVRQVA

Sequences:

>Translated_620_residues
MTTEYDVIVIGGGHAGCEAAAAAARCGARTLLLTHRRDTIGAMSCNPAIGGIGKGHLVREIDALDGLMARAADRAGIHFK
LLNRSKGPAVHGPRAQADRSLYRRAIQDLLAETANLDIAEGAAGDLIVDDAGQAAGVVCEDGRQFRAGAVVLTAGTFLRG
VIHIGHDSHPAGRVGEPPAHALGERLQALGLPMGRLKTGTPARLDRTSIDWDSLAEDRGDAVPEPFSRLTQAIDNPQLSC
RITATTPRTHALIREHLHLSAVYGGAIAGRGPRYCPSIEDKVVRFAERDSHQIFLEPEALPGNAGGDLVYPNGISTSLPA
DIQEQLIHSIPGLERCRIVRPGYAVEYDYVDPRALAPTLELTALPRLFLAGQINGTTGYEEAGAQGLLAGLNAARRAGGG
EGIAIDRGAAYLGVMIDDLATQGVSEPYRMFTSRAEYRLSLRADNADLRLTGQGIGWGCVGSARAHLFTAERDAIDTAMQ
RAGAESFLPDALQQAGITVSADGRRRTLLDVLATAATPDAIARIAPWFAALPSRVSRHVETEARYSGYLVRQAREIRQLE
AETRITLPADLDYRRIGGLSSEMQERLAAARPASFSAAQRVPGITPSALMALLSHVRQVA
>Mature_619_residues
TTEYDVIVIGGGHAGCEAAAAAARCGARTLLLTHRRDTIGAMSCNPAIGGIGKGHLVREIDALDGLMARAADRAGIHFKL
LNRSKGPAVHGPRAQADRSLYRRAIQDLLAETANLDIAEGAAGDLIVDDAGQAAGVVCEDGRQFRAGAVVLTAGTFLRGV
IHIGHDSHPAGRVGEPPAHALGERLQALGLPMGRLKTGTPARLDRTSIDWDSLAEDRGDAVPEPFSRLTQAIDNPQLSCR
ITATTPRTHALIREHLHLSAVYGGAIAGRGPRYCPSIEDKVVRFAERDSHQIFLEPEALPGNAGGDLVYPNGISTSLPAD
IQEQLIHSIPGLERCRIVRPGYAVEYDYVDPRALAPTLELTALPRLFLAGQINGTTGYEEAGAQGLLAGLNAARRAGGGE
GIAIDRGAAYLGVMIDDLATQGVSEPYRMFTSRAEYRLSLRADNADLRLTGQGIGWGCVGSARAHLFTAERDAIDTAMQR
AGAESFLPDALQQAGITVSADGRRRTLLDVLATAATPDAIARIAPWFAALPSRVSRHVETEARYSGYLVRQAREIRQLEA
ETRITLPADLDYRRIGGLSSEMQERLAAARPASFSAAQRVPGITPSALMALLSHVRQVA

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family

Homologues:

Organism=Homo sapiens, GI74024895, Length=637, Percent_Identity=46.4678178963893, Blast_Score=534, Evalue=1e-151,
Organism=Homo sapiens, GI19882217, Length=662, Percent_Identity=44.7129909365559, Blast_Score=519, Evalue=1e-147,
Organism=Homo sapiens, GI183227703, Length=677, Percent_Identity=43.7223042836041, Blast_Score=514, Evalue=1e-146,
Organism=Escherichia coli, GI2367273, Length=623, Percent_Identity=52.9695024077047, Blast_Score=595, Evalue=1e-171,
Organism=Caenorhabditis elegans, GI17534255, Length=625, Percent_Identity=40.8, Blast_Score=466, Evalue=1e-131,
Organism=Saccharomyces cerevisiae, GI6321202, Length=632, Percent_Identity=45.253164556962, Blast_Score=530, Evalue=1e-151,
Organism=Drosophila melanogaster, GI24658174, Length=633, Percent_Identity=46.9194312796209, Blast_Score=536, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MNMG_GLUDA (A9HE13)

Other databases:

- EMBL:   AM889285
- EMBL:   CP001189
- RefSeq:   YP_001601484.1
- RefSeq:   YP_002276314.1
- ProteinModelPortal:   A9HE13
- SMR:   A9HE13
- GeneID:   5788761
- GeneID:   6975365
- GenomeReviews:   AM889285_GR
- GenomeReviews:   CP001189_GR
- KEGG:   gdj:Gdia_1939
- HOGENOM:   HBG284774
- OMA:   FHQQQEI
- ProtClustDB:   PRK05192
- GO:   GO:0005737
- HAMAP:   MF_00129
- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595
- TIGRFAMs:   TIGR00136

Pfam domain/function: PF01134 GIDA

EC number: NA

Molecular weight: Translated: 65939; Mature: 65807

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEYDVIVIGGGHAGCEAAAAAARCGARTLLLTHRRDTIGAMSCNPAIGGIGKGHLVRE
CCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
IDALDGLMARAADRAGIHFKLLNRSKGPAVHGPRAQADRSLYRRAIQDLLAETANLDIAE
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECC
GAAGDLIVDDAGQAAGVVCEDGRQFRAGAVVLTAGTFLRGVIHIGHDSHPAGRVGEPPAH
CCCCCEEEECCCCCCCEEECCCCEEECCEEEEEHHHHHHHHEEECCCCCCCCCCCCCHHH
ALGERLQALGLPMGRLKTGTPARLDRTSIDWDSLAEDRGDAVPEPFSRLTQAIDNPQLSC
HHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEE
RITATTPRTHALIREHLHLSAVYGGAIAGRGPRYCPSIEDKVVRFAERDSHQIFLEPEAL
EEEECCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCC
PGNAGGDLVYPNGISTSLPADIQEQLIHSIPGLERCRIVRPGYAVEYDYVDPRALAPTLE
CCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCHHEEEECCCCEEEECCCCCHHHCCCHH
LTALPRLFLAGQINGTTGYEEAGAQGLLAGLNAARRAGGGEGIAIDRGAAYLGVMIDDLA
HHHHHHHHEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH
TQGVSEPYRMFTSRAEYRLSLRADNADLRLTGQGIGWGCVGSARAHLFTAERDAIDTAMQ
HCCCCHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHH
RAGAESFLPDALQQAGITVSADGRRRTLLDVLATAATPDAIARIAPWFAALPSRVSRHVE
HCCCHHCCHHHHHHCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TEARYSGYLVRQAREIRQLEAETRITLPADLDYRRIGGLSSEMQERLAAARPASFSAAQR
HHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCCHHHHH
VPGITPSALMALLSHVRQVA
CCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTEYDVIVIGGGHAGCEAAAAAARCGARTLLLTHRRDTIGAMSCNPAIGGIGKGHLVRE
CCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
IDALDGLMARAADRAGIHFKLLNRSKGPAVHGPRAQADRSLYRRAIQDLLAETANLDIAE
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECC
GAAGDLIVDDAGQAAGVVCEDGRQFRAGAVVLTAGTFLRGVIHIGHDSHPAGRVGEPPAH
CCCCCEEEECCCCCCCEEECCCCEEECCEEEEEHHHHHHHHEEECCCCCCCCCCCCCHHH
ALGERLQALGLPMGRLKTGTPARLDRTSIDWDSLAEDRGDAVPEPFSRLTQAIDNPQLSC
HHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEE
RITATTPRTHALIREHLHLSAVYGGAIAGRGPRYCPSIEDKVVRFAERDSHQIFLEPEAL
EEEECCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCC
PGNAGGDLVYPNGISTSLPADIQEQLIHSIPGLERCRIVRPGYAVEYDYVDPRALAPTLE
CCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCHHEEEECCCCEEEECCCCCHHHCCCHH
LTALPRLFLAGQINGTTGYEEAGAQGLLAGLNAARRAGGGEGIAIDRGAAYLGVMIDDLA
HHHHHHHHEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH
TQGVSEPYRMFTSRAEYRLSLRADNADLRLTGQGIGWGCVGSARAHLFTAERDAIDTAMQ
HCCCCHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHH
RAGAESFLPDALQQAGITVSADGRRRTLLDVLATAATPDAIARIAPWFAALPSRVSRHVE
HCCCHHCCHHHHHHCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TEARYSGYLVRQAREIRQLEAETRITLPADLDYRRIGGLSSEMQERLAAARPASFSAAQR
HHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCCHHHHH
VPGITPSALMALLSHVRQVA
CCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA