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The map label for this gene is trbL

Identifier: 162146832

GI number: 162146832

Start: 1028418

End: 1029677

Strand: Reverse

Name: trbL

Synonym: GDI_1014

Alternate gene names: NA

Gene position: 1029677-1028418 (Counterclockwise)

Preceding gene: 162146833

Following gene: 162146831

Centisome position: 26.11

GC content: 67.22

Gene sequence:

>1260_bases
ATGCAGCAGGGCACCGGCGTCATCGACAATTTCCTCGCCATTTTCACCCAGTATATCGATTCCGGATTCGGTCTGGTGCA
GGGCGACGTGCACTGGCTCGCGGCGGCGTTGATCACGATCGACATCACCTTGGCCGGGCTGTTCTGGGCGCTGGCGCCCG
ACGAGGACGTGCTGGCGCGCCTGATCCGCAAGACCCTGTTCATCGGCATGTTTGCTTTCATCATCGGCAATTTCAACGGG
CTGGCGCGGATCATCTATGAATCCTTCGCAGGCCTCGGCATCGAGGCGGGCGGCGGGCATCTCACCCAGGCGCAGCTTCT
CCAGCCGGGGCGGCTGGCGCAGGTCGGCATCGACGCCGGCAAGCCGATCCTGACCTCGATCTCCTCGCTGGTTGGTTTCG
TCGCCATCTTCAACAACGCGATCCAGATCGCCGTATTGCTGATCGCGTGGCTGATCGTGGTCATCAGCTTCTTCGTCATG
GCGATCCAGCTCTTCGTGGCGCTGATCGAGTTCAAGCTGACCACGCTGGCGGGGTTCGTGCTGGTGCCCTTCGGTCTGTT
CGGCCGCACCGCCTTCCTTGCCGAGAAGGTGCTGGGCAATGTGGTGTCGTCCGGGATCAAGGTGCTGATGCTCGCCGTCA
TCGTTGGCATCGGCTCGACGGTGTTCGGCCAGTTCACCAGCGGCTTCAACAATCCGCCGACCATCAATGACGCGCTGACC
CTGATTTTGGCTTCCCTGACGCTGCTCGGTCTGACCGTGTTCGGCCCGGCATTGGCCAACGGCCTGATCGCCGGTGGTCC
GCAGTTGGGTGCGGGATCTGCGGTCGCTACGGCGGCCGGGGTCATCGGTGCTGGTGTGGCCGCCGCATCAGGGGCCGGAC
TGGCTGTGGGAGCGGCGGCGGCGGCCGTGCGTAGCGGCGCTTTTGTCGCGGGCGGGGCCACCGCCGCCTATCGGGCCGGC
GGCGCGGCCGGTGTCGCCAAGACTGGATTGTCTGCCGCCGCCAGTCCGTTGCGCAGGGCGGCGGCCAGTGTCCGCACCAG
CTATCAGGCCGGCGGGGCTGCCGCGACCGGCGGCGTTGGTGGTGCCACCGCTTCGGGCGGTGGCGGTGGAGCAGGGGCGC
CCGGCAAGCCGCCAGCCTGGGCCAGCCGGATGCAGCGCAACAACCGGATCAGGGGCGGGGCTGACGCCGCCGCGCAGGCG
ATCAAGGGCGGCGACCGGCCCAGCGGCGGCCACGACGTCGATCTCTCGGAGGGAGAATAA

Upstream 100 bases:

>100_bases
CAGGCGCTCGGCATGAAGGCCGACGGCGATCCGGCTTGTGCTGCGATCTGGGCCGAGAACCGCAAGCGCTTCTTCGCGCC
TGACGCGGCACGGTGACGCC

Downstream 100 bases:

>100_bases
CCATGTTCCTTCGCCCCAGCATACGGTTCGGCAAAACACCAGAACCGGAAACGCCCTATCATAAGGCCGGACAGGTCTGG
GACGACCGCATCGGTTTGGC

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MQQGTGVIDNFLAIFTQYIDSGFGLVQGDVHWLAAALITIDITLAGLFWALAPDEDVLARLIRKTLFIGMFAFIIGNFNG
LARIIYESFAGLGIEAGGGHLTQAQLLQPGRLAQVGIDAGKPILTSISSLVGFVAIFNNAIQIAVLLIAWLIVVISFFVM
AIQLFVALIEFKLTTLAGFVLVPFGLFGRTAFLAEKVLGNVVSSGIKVLMLAVIVGIGSTVFGQFTSGFNNPPTINDALT
LILASLTLLGLTVFGPALANGLIAGGPQLGAGSAVATAAGVIGAGVAAASGAGLAVGAAAAAVRSGAFVAGGATAAYRAG
GAAGVAKTGLSAAASPLRRAAASVRTSYQAGGAAATGGVGGATASGGGGGAGAPGKPPAWASRMQRNNRIRGGADAAAQA
IKGGDRPSGGHDVDLSEGE

Sequences:

>Translated_419_residues
MQQGTGVIDNFLAIFTQYIDSGFGLVQGDVHWLAAALITIDITLAGLFWALAPDEDVLARLIRKTLFIGMFAFIIGNFNG
LARIIYESFAGLGIEAGGGHLTQAQLLQPGRLAQVGIDAGKPILTSISSLVGFVAIFNNAIQIAVLLIAWLIVVISFFVM
AIQLFVALIEFKLTTLAGFVLVPFGLFGRTAFLAEKVLGNVVSSGIKVLMLAVIVGIGSTVFGQFTSGFNNPPTINDALT
LILASLTLLGLTVFGPALANGLIAGGPQLGAGSAVATAAGVIGAGVAAASGAGLAVGAAAAAVRSGAFVAGGATAAYRAG
GAAGVAKTGLSAAASPLRRAAASVRTSYQAGGAAATGGVGGATASGGGGGAGAPGKPPAWASRMQRNNRIRGGADAAAQA
IKGGDRPSGGHDVDLSEGE
>Mature_419_residues
MQQGTGVIDNFLAIFTQYIDSGFGLVQGDVHWLAAALITIDITLAGLFWALAPDEDVLARLIRKTLFIGMFAFIIGNFNG
LARIIYESFAGLGIEAGGGHLTQAQLLQPGRLAQVGIDAGKPILTSISSLVGFVAIFNNAIQIAVLLIAWLIVVISFFVM
AIQLFVALIEFKLTTLAGFVLVPFGLFGRTAFLAEKVLGNVVSSGIKVLMLAVIVGIGSTVFGQFTSGFNNPPTINDALT
LILASLTLLGLTVFGPALANGLIAGGPQLGAGSAVATAAGVIGAGVAAASGAGLAVGAAAAAVRSGAFVAGGATAAYRAG
GAAGVAKTGLSAAASPLRRAAASVRTSYQAGGAAATGGVGGATASGGGGGAGAPGKPPAWASRMQRNNRIRGGADAAAQA
IKGGDRPSGGHDVDLSEGE

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41586; Mature: 41586

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGTGVIDNFLAIFTQYIDSGFGLVQGDVHWLAAALITIDITLAGLFWALAPDEDVLAR
CCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LIRKTLFIGMFAFIIGNFNGLARIIYESFAGLGIEAGGGHLTQAQLLQPGRLAQVGIDAG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCHHEECCCCC
KPILTSISSLVGFVAIFNNAIQIAVLLIAWLIVVISFFVMAIQLFVALIEFKLTTLAGFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPFGLFGRTAFLAEKVLGNVVSSGIKVLMLAVIVGIGSTVFGQFTSGFNNPPTINDALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH
LILASLTLLGLTVFGPALANGLIAGGPQLGAGSAVATAAGVIGAGVAAASGAGLAVGAAA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AAVRSGAFVAGGATAAYRAGGAAGVAKTGLSAAASPLRRAAASVRTSYQAGGAAATGGVG
HHHHCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GATASGGGGGAGAPGKPPAWASRMQRNNRIRGGADAAAQAIKGGDRPSGGHDVDLSEGE
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQQGTGVIDNFLAIFTQYIDSGFGLVQGDVHWLAAALITIDITLAGLFWALAPDEDVLAR
CCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LIRKTLFIGMFAFIIGNFNGLARIIYESFAGLGIEAGGGHLTQAQLLQPGRLAQVGIDAG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCHHEECCCCC
KPILTSISSLVGFVAIFNNAIQIAVLLIAWLIVVISFFVMAIQLFVALIEFKLTTLAGFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPFGLFGRTAFLAEKVLGNVVSSGIKVLMLAVIVGIGSTVFGQFTSGFNNPPTINDALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH
LILASLTLLGLTVFGPALANGLIAGGPQLGAGSAVATAAGVIGAGVAAASGAGLAVGAAA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AAVRSGAFVAGGATAAYRAGGAAGVAKTGLSAAASPLRRAAASVRTSYQAGGAAATGGVG
HHHHCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GATASGGGGGAGAPGKPPAWASRMQRNNRIRGGADAAAQAIKGGDRPSGGHDVDLSEGE
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA