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The map label for this gene is yhhW [C]

Identifier: 162146814

GI number: 162146814

Start: 1011430

End: 1012155

Strand: Reverse

Name: yhhW [C]

Synonym: GDI_0996

Alternate gene names: 162146814

Gene position: 1012155-1011430 (Counterclockwise)

Preceding gene: 162146815

Following gene: 162146813

Centisome position: 25.66

GC content: 65.01

Gene sequence:

>726_bases
ATGATCAAAGTGCGGCTGCCTTCCGAGCTGGGTCATCTGGTCCAGGATGGCGTCAAGCTCGAGTGCCATTTCGCATTCCG
GGACTATGCTCACCCCGCTCCCTCACATTGGGGACGGCTCCGGGTGCTCAACCGGATCGACCTGGAGGCCGATGCCGCCT
TCAGGCTGGACCATGAAAGCGCGGTCGAAATCGTGACCCTCGTTCTCAACGGAACAGTTCTGGCGCTGGTGGATGGGCTT
GGCGACAGCCTGCTGAAGCCGGGCGATTGTCATCTCGTCAGCGCCGGCGATGGCGTGGCCCTGGCGACGTGGAAGACCGG
CGGTGCGCCGGCGTCGCTCCTGCAACTGTGGCTGATGCCCGAAGAGGAAGGGGGCGCGTCGGAAATCGGCCTGCGCCGCG
ATGGGGACCGCTTCGGGCACGAGCATGTCCTGCTGGCCAGCGGCTTTCCCGAAGACGACCCGGAGGAAGCTGATCAGGGG
CGGTCGGGTGACCCTCTACCGTTAAAGGCTCGGGTTCGCGTGCTCCGCCTCACGCTCCCGACTGGCGGACAGGCCGTCAT
CCCCACCTATGCGGACCGCTGCGTCTACGCCCTCGTCGCCGCAGGCCAGGTCGAAATTCAGGGGTTCGATGCTGGTGCTG
GCTGCGGTGTCGCGATCACGGGATGCGAGACGGTCGTTGTGCATGCGCGCGAGCCATCCACTCTGGTTATCTGTGATTCC
GACTGA

Upstream 100 bases:

>100_bases
GGCTTTACCGCGCGCTTGGTGGTGGCTGGGAGGCGCGCTATCCGGAAGCGGTGGCCCGGCGGTCGACCATCCAGTCAGCG
GGGCAGGGAGGGCGACAGGG

Downstream 100 bases:

>100_bases
GCGAAAGGAGACACGCATGAAGCTGTGCCGTTATGGGGAACCGGGAGAGGAACGTCCGGCTCTGATCGATCAGACGGGAG
GCCTGCGCAGCTTGGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MIKVRLPSELGHLVQDGVKLECHFAFRDYAHPAPSHWGRLRVLNRIDLEADAAFRLDHESAVEIVTLVLNGTVLALVDGL
GDSLLKPGDCHLVSAGDGVALATWKTGGAPASLLQLWLMPEEEGGASEIGLRRDGDRFGHEHVLLASGFPEDDPEEADQG
RSGDPLPLKARVRVLRLTLPTGGQAVIPTYADRCVYALVAAGQVEIQGFDAGAGCGVAITGCETVVVHAREPSTLVICDS
D

Sequences:

>Translated_241_residues
MIKVRLPSELGHLVQDGVKLECHFAFRDYAHPAPSHWGRLRVLNRIDLEADAAFRLDHESAVEIVTLVLNGTVLALVDGL
GDSLLKPGDCHLVSAGDGVALATWKTGGAPASLLQLWLMPEEEGGASEIGLRRDGDRFGHEHVLLASGFPEDDPEEADQG
RSGDPLPLKARVRVLRLTLPTGGQAVIPTYADRCVYALVAAGQVEIQGFDAGAGCGVAITGCETVVVHAREPSTLVICDS
D
>Mature_241_residues
MIKVRLPSELGHLVQDGVKLECHFAFRDYAHPAPSHWGRLRVLNRIDLEADAAFRLDHESAVEIVTLVLNGTVLALVDGL
GDSLLKPGDCHLVSAGDGVALATWKTGGAPASLLQLWLMPEEEGGASEIGLRRDGDRFGHEHVLLASGFPEDDPEEADQG
RSGDPLPLKARVRVLRLTLPTGGQAVIPTYADRCVYALVAAGQVEIQGFDAGAGCGVAITGCETVVVHAREPSTLVICDS
D

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789847, Length=241, Percent_Identity=28.6307053941909, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: NA

Molecular weight: Translated: 25611; Mature: 25611

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVRLPSELGHLVQDGVKLECHFAFRDYAHPAPSHWGRLRVLNRIDLEADAAFRLDHES
CEEEECHHHHHHHHHCCEEEEEEEEEHHCCCCCCCCCCEEEEEEECCCCCCCEEEECCHH
AVEIVTLVLNGTVLALVDGLGDSLLKPGDCHLVSAGDGVALATWKTGGAPASLLQLWLMP
HEEEEEHHHCCEEEEEEECCCHHHCCCCCEEEEECCCCEEEEEEECCCCCHHHHEEEECC
EEEGGASEIGLRRDGDRFGHEHVLLASGFPEDDPEEADQGRSGDPLPLKARVRVLRLTLP
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCHHEEEEEEEEECC
TGGQAVIPTYADRCVYALVAAGQVEIQGFDAGAGCGVAITGCETVVVHAREPSTLVICDS
CCCCEECCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCEEEEEEECCCCEEEEECC
D
C
>Mature Secondary Structure
MIKVRLPSELGHLVQDGVKLECHFAFRDYAHPAPSHWGRLRVLNRIDLEADAAFRLDHES
CEEEECHHHHHHHHHCCEEEEEEEEEHHCCCCCCCCCCEEEEEEECCCCCCCEEEECCHH
AVEIVTLVLNGTVLALVDGLGDSLLKPGDCHLVSAGDGVALATWKTGGAPASLLQLWLMP
HEEEEEHHHCCEEEEEEECCCHHHCCCCCEEEEECCCCEEEEEEECCCCCHHHHEEEECC
EEEGGASEIGLRRDGDRFGHEHVLLASGFPEDDPEEADQGRSGDPLPLKARVRVLRLTLP
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCHHEEEEEEEEECC
TGGQAVIPTYADRCVYALVAAGQVEIQGFDAGAGCGVAITGCETVVVHAREPSTLVICDS
CCCCEECCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCEEEEEEECCCCEEEEECC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]