| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162146029
Identifier: 162146029
GI number: 162146029
Start: 211606
End: 213219
Strand: Reverse
Name: 162146029
Synonym: GDI_0197
Alternate gene names: NA
Gene position: 213219-211606 (Counterclockwise)
Preceding gene: 162146030
Following gene: 162146017
Centisome position: 5.41
GC content: 66.67
Gene sequence:
>1614_bases ATGAACGCGCGGAACCAGATCGATCTCCAGATCATGTGGAACCGCCTGATCGCCGTCGTCGGCGAGCAGGCTCAGGTCCT GATTCGCACGGCCTTCAGCCCGATCGTGCGCGAATGCGAGGATATTTCGGCGGGAATCTTCGACCTGCGGGGCCGCATGA TCGCGCAGGCCGTGACCGGCACCCCCGGCCACGTCAATTCGATGGCGGAATCCGTGGGCCATTTCCTGCGCCACTTCCCC ATCGAGACCATGAAGGACGGCGATGCCTACATCACCAACGACCCGTGGATGGGCACGGGGCACCTGAACGATTTCGTCGT CACGACCCCGGCCTTCCACAGGGGAAAGCTTGTGGGGCTGTTCTCCTGCACCAGCCACCTGATGGATATCGGCGGCCTGG GCTGCGGCCCGGAAGGGACGGACGTGCTGATGGAGGGGCTGTCGATCCCCATGCTCAAGCTGATCGACCAGGGCCGGGTG AACGAGACCCTGATGGCGATGATCCGCACCAACACCCGCCTGCCGGTCGACACCGAGGGCGATACCTATTCCCTGGCGGC CTGCAACGACGTCGGCGTGCGCGCGCTGCGCGCGATGATGGACGAATTCGCCATCGATACGCTGGAACCGCTGGCCGATT TCATCATCGAGCGATCGTACGATGCCGTCGTGGAAAAAATCGCCGCCCTGCCACGCGGCACATGGTCGTACGACATGACG ATAGACGGCTACGATGCGCCGCTGACGCTGCGGGCGAGCCTGACGATCGATGCCGATGGCGTGCAGGTCGATTATGACGG GTCGGACCCCGTCGTGCCACGCGGAATCAACGTACCGCTGGCCTATACCAAGGCCTATACGGTGTTCGGCCTGGCCTGCG CCATCGCGCCGGACGTGCCCAACAATGCCGGATCACTGGCGGCCTATCGCGTCACGGCACCGGCGGGAAGCGTGCTCAAC GCGCCGTACCCGGCGCCGGTCTCCGCACGGCATATCGTCGGGCAGATGCTGCCGGACATGGTGTTCGGCTGCCTGCGCAC GCCCCTGCCCGACCGGATTCCGGCCGAAGGCACATCCTGCCTGTGGAACATCACGGTACGCGGAAACTGGGTGCCGGACG GCCAGGATACGACGCAGGCCTTCGCCCTGGCCATCACGACCAATGGCGGCACGGGCGCGCGGCCGGGCCTGGACGGGCTG TCGGCCACCGCGTTTCCCTCCGGCGTCCATGGCACCCCGATCGAGATCGCGGAAATACAGTGCCCCCTCATCTTCTGGCG CAAGGAATTCCGCGAAGGCAGCGGCGGCGACGGCGAGACCCGCGGCGGCCTGGGTCAGATCATGGAGATCGGCAGCACGG AACAGCGGCCGTTCGACCTGCTGGCCGCATTCGACCGGATCACATACCCCCCGCGCGGCGCAGTCGGGGGCAAGGACGGC GCCCCCGGCTGCGTCAAGCTGGCGGGCGGCAGGGAACTCGCAGGCAAGGGGCTACAGATTATCCCGCCCGACGAGACGTT GATCATCATGACGCCCGGCGGGGGCGGCCTTGGCGCGCCCGGGGCCCGGACGGAAACACGACGCCAGGCGGACCGCGAGG GCGGTTATGTATAG
Upstream 100 bases:
>100_bases TGATCGCCGAGCGCGAGACCACCACCTACGTTTCGGCCCGCTTCGACGCCTTTATCGACGGCAGCGGCAATATCGTCATG GACATGAAGGAAACGGCCCA
Downstream 100 bases:
>100_bases CATACGACGGTACTGGCAGGCGGTCGAAAGACCGCCTGCCCCCGAGGCAGCCAGTGCCGGTTCACAGACATGACGGAACG GACGCATCGGCCGATGAGTC
Product: 5-oxoprolinase (ATP-hydrolysing)
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MNARNQIDLQIMWNRLIAVVGEQAQVLIRTAFSPIVRECEDISAGIFDLRGRMIAQAVTGTPGHVNSMAESVGHFLRHFP IETMKDGDAYITNDPWMGTGHLNDFVVTTPAFHRGKLVGLFSCTSHLMDIGGLGCGPEGTDVLMEGLSIPMLKLIDQGRV NETLMAMIRTNTRLPVDTEGDTYSLAACNDVGVRALRAMMDEFAIDTLEPLADFIIERSYDAVVEKIAALPRGTWSYDMT IDGYDAPLTLRASLTIDADGVQVDYDGSDPVVPRGINVPLAYTKAYTVFGLACAIAPDVPNNAGSLAAYRVTAPAGSVLN APYPAPVSARHIVGQMLPDMVFGCLRTPLPDRIPAEGTSCLWNITVRGNWVPDGQDTTQAFALAITTNGGTGARPGLDGL SATAFPSGVHGTPIEIAEIQCPLIFWRKEFREGSGGDGETRGGLGQIMEIGSTEQRPFDLLAAFDRITYPPRGAVGGKDG APGCVKLAGGRELAGKGLQIIPPDETLIIMTPGGGGLGAPGARTETRRQADREGGYV
Sequences:
>Translated_537_residues MNARNQIDLQIMWNRLIAVVGEQAQVLIRTAFSPIVRECEDISAGIFDLRGRMIAQAVTGTPGHVNSMAESVGHFLRHFP IETMKDGDAYITNDPWMGTGHLNDFVVTTPAFHRGKLVGLFSCTSHLMDIGGLGCGPEGTDVLMEGLSIPMLKLIDQGRV NETLMAMIRTNTRLPVDTEGDTYSLAACNDVGVRALRAMMDEFAIDTLEPLADFIIERSYDAVVEKIAALPRGTWSYDMT IDGYDAPLTLRASLTIDADGVQVDYDGSDPVVPRGINVPLAYTKAYTVFGLACAIAPDVPNNAGSLAAYRVTAPAGSVLN APYPAPVSARHIVGQMLPDMVFGCLRTPLPDRIPAEGTSCLWNITVRGNWVPDGQDTTQAFALAITTNGGTGARPGLDGL SATAFPSGVHGTPIEIAEIQCPLIFWRKEFREGSGGDGETRGGLGQIMEIGSTEQRPFDLLAAFDRITYPPRGAVGGKDG APGCVKLAGGRELAGKGLQIIPPDETLIIMTPGGGGLGAPGARTETRRQADREGGYV >Mature_537_residues MNARNQIDLQIMWNRLIAVVGEQAQVLIRTAFSPIVRECEDISAGIFDLRGRMIAQAVTGTPGHVNSMAESVGHFLRHFP IETMKDGDAYITNDPWMGTGHLNDFVVTTPAFHRGKLVGLFSCTSHLMDIGGLGCGPEGTDVLMEGLSIPMLKLIDQGRV NETLMAMIRTNTRLPVDTEGDTYSLAACNDVGVRALRAMMDEFAIDTLEPLADFIIERSYDAVVEKIAALPRGTWSYDMT IDGYDAPLTLRASLTIDADGVQVDYDGSDPVVPRGINVPLAYTKAYTVFGLACAIAPDVPNNAGSLAAYRVTAPAGSVLN APYPAPVSARHIVGQMLPDMVFGCLRTPLPDRIPAEGTSCLWNITVRGNWVPDGQDTTQAFALAITTNGGTGARPGLDGL SATAFPSGVHGTPIEIAEIQCPLIFWRKEFREGSGGDGETRGGLGQIMEIGSTEQRPFDLLAAFDRITYPPRGAVGGKDG APGCVKLAGGRELAGKGLQIIPPDETLIIMTPGGGGLGAPGARTETRRQADREGGYV
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=549, Percent_Identity=29.6903460837887, Blast_Score=149, Evalue=6e-36, Organism=Caenorhabditis elegans, GI133901900, Length=539, Percent_Identity=28.5714285714286, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI133901902, Length=509, Percent_Identity=28.2907662082515, Blast_Score=156, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6322634, Length=546, Percent_Identity=25.6410256410256, Blast_Score=140, Evalue=5e-34, Organism=Drosophila melanogaster, GI45550492, Length=541, Percent_Identity=26.9870609981516, Blast_Score=141, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 57171; Mature: 57171
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARNQIDLQIMWNRLIAVVGEQAQVLIRTAFSPIVRECEDISAGIFDLRGRMIAQAVTG CCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC TPGHVNSMAESVGHFLRHFPIETMKDGDAYITNDPWMGTGHLNDFVVTTPAFHRGKLVGL CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCEEEH FSCTSHLMDIGGLGCGPEGTDVLMEGLSIPMLKLIDQGRVNETLMAMIRTNTRLPVDTEG HHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC DTYSLAACNDVGVRALRAMMDEFAIDTLEPLADFIIERSYDAVVEKIAALPRGTWSYDMT CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE IDGYDAPLTLRASLTIDADGVQVDYDGSDPVVPRGINVPLAYTKAYTVFGLACAIAPDVP ECCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHEEECCCCC NNAGSLAAYRVTAPAGSVLNAPYPAPVSARHIVGQMLPDMVFGCLRTPLPDRIPAEGTSC CCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE LWNITVRGNWVPDGQDTTQAFALAITTNGGTGARPGLDGLSATAFPSGVHGTPIEIAEIQ EEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE CPLIFWRKEFREGSGGDGETRGGLGQIMEIGSTEQRPFDLLAAFDRITYPPRGAVGGKDG CHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC APGCVKLAGGRELAGKGLQIIPPDETLIIMTPGGGGLGAPGARTETRRQADREGGYV CCCEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MNARNQIDLQIMWNRLIAVVGEQAQVLIRTAFSPIVRECEDISAGIFDLRGRMIAQAVTG CCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC TPGHVNSMAESVGHFLRHFPIETMKDGDAYITNDPWMGTGHLNDFVVTTPAFHRGKLVGL CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCEEEH FSCTSHLMDIGGLGCGPEGTDVLMEGLSIPMLKLIDQGRVNETLMAMIRTNTRLPVDTEG HHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC DTYSLAACNDVGVRALRAMMDEFAIDTLEPLADFIIERSYDAVVEKIAALPRGTWSYDMT CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE IDGYDAPLTLRASLTIDADGVQVDYDGSDPVVPRGINVPLAYTKAYTVFGLACAIAPDVP ECCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHEEECCCCC NNAGSLAAYRVTAPAGSVLNAPYPAPVSARHIVGQMLPDMVFGCLRTPLPDRIPAEGTSC CCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE LWNITVRGNWVPDGQDTTQAFALAITTNGGTGARPGLDGLSATAFPSGVHGTPIEIAEIQ EEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE CPLIFWRKEFREGSGGDGETRGGLGQIMEIGSTEQRPFDLLAAFDRITYPPRGAVGGKDG CHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC APGCVKLAGGRELAGKGLQIIPPDETLIIMTPGGGGLGAPGARTETRRQADREGGYV CCCEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]