Click here to switch to the map view.

The map label for this gene is 162146020

Identifier: 162146020

GI number: 162146020

Start: 201269

End: 202117

Strand: Direct

Name: 162146020

Synonym: GDI_0188

Alternate gene names: NA

Gene position: 201269-202117 (Clockwise)

Preceding gene: 162146019

Following gene: 162146021

Centisome position: 5.1

GC content: 65.02

Gene sequence:

>849_bases
ATGCGAATCATGGTCGATTCCGATTCGGCGAGATTGCCCTATTTCAATGCCTCTCCTGCCGAAGTCCGCCGGCTTTGCCG
GGCGGGCGAGAGCGGTCCGGTGACCGCCGGCATGGCCGCGGGATATATCCAGGCCAATATTGTCATGCTGCCCGCCAGCC
TCGCGGATGCATTCCATGAATTCTGCCTCAGGAACCCCAAGCCGTGTCCGCTGGTCGGCATGTCGCGTCCGGGGGACTAC
CGGCTTCCGTCGCTGGGTGCGGACCTGGACCTCCGGACCGACCTGCCGCTTTATCGCGTATGGCGCGACGGCAACATGGT
GGCCGAAACCGGTGATATCCGGGACCAGTGGCGCGACGATCTGGTCACGTTCGCGCTCGGCTGTTCCTTCTCGTTCGAGA
ACGCCCTGACGGCCTGTGACGTGCCCATGCGGCACCTGCAGCTCGGCCGCGGCGTGCCGGTCTATCGGACGAATATCGCC
TGCACGCCGGTCGGCCCGTTCGCGGGGCCGGTGGTCGTGTCCATGCGGCCGTTCCGGTCGCATCACGCCATTCGGGCCGT
GCAGATCAGTTCGCTGATCCCGCTGGCCCATGGTGCGCCGATACAGATCGGCTTTCCGGAAGAAATCGGCATTGCCGACA
TCGACAGCCCCGATTACGGCGACCCTACGGAAGTGGCTGACGATGAACTTCCGGTCTTCTGGGCCTGCGGGGTCACGCCG
CAGGCGGTTCTGGCCGCCAGCAAGCCGGAATTCGCCATCACCCACGCGCCGGGCGCGATGCTGGTCACGGACATGCCCAT
AGAAGGCTACGAGGACCTGGTGGCGAGCCATCGGGGCAGGATTATCTGA

Upstream 100 bases:

>100_bases
CGGCACCGGGCAGATAGTCGTTTCTGTGTGGATACGGATCGGCACGCGATACGCGGCGTTGCGTGTCGCAGGGATGGCCC
GCTCCGATGTCACGAAAGGG

Downstream 100 bases:

>100_bases
TCGGCCATTCGCCAGGTGTCCGGCGGGCGTGCGCGGCCCGGTATCGTTCCCGCTTCCATATCGTTTCGCACATAAAATAA
GATCGGGGGCGTATTTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRIMVDSDSARLPYFNASPAEVRRLCRAGESGPVTAGMAAGYIQANIVMLPASLADAFHEFCLRNPKPCPLVGMSRPGDY
RLPSLGADLDLRTDLPLYRVWRDGNMVAETGDIRDQWRDDLVTFALGCSFSFENALTACDVPMRHLQLGRGVPVYRTNIA
CTPVGPFAGPVVVSMRPFRSHHAIRAVQISSLIPLAHGAPIQIGFPEEIGIADIDSPDYGDPTEVADDELPVFWACGVTP
QAVLAASKPEFAITHAPGAMLVTDMPIEGYEDLVASHRGRII

Sequences:

>Translated_282_residues
MRIMVDSDSARLPYFNASPAEVRRLCRAGESGPVTAGMAAGYIQANIVMLPASLADAFHEFCLRNPKPCPLVGMSRPGDY
RLPSLGADLDLRTDLPLYRVWRDGNMVAETGDIRDQWRDDLVTFALGCSFSFENALTACDVPMRHLQLGRGVPVYRTNIA
CTPVGPFAGPVVVSMRPFRSHHAIRAVQISSLIPLAHGAPIQIGFPEEIGIADIDSPDYGDPTEVADDELPVFWACGVTP
QAVLAASKPEFAITHAPGAMLVTDMPIEGYEDLVASHRGRII
>Mature_282_residues
MRIMVDSDSARLPYFNASPAEVRRLCRAGESGPVTAGMAAGYIQANIVMLPASLADAFHEFCLRNPKPCPLVGMSRPGDY
RLPSLGADLDLRTDLPLYRVWRDGNMVAETGDIRDQWRDDLVTFALGCSFSFENALTACDVPMRHLQLGRGVPVYRTNIA
CTPVGPFAGPVVVSMRPFRSHHAIRAVQISSLIPLAHGAPIQIGFPEEIGIADIDSPDYGDPTEVADDELPVFWACGVTP
QAVLAASKPEFAITHAPGAMLVTDMPIEGYEDLVASHRGRII

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family [H]

Homologues:

Organism=Homo sapiens, GI156139135, Length=237, Percent_Identity=32.9113924050633, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI156139133, Length=237, Percent_Identity=32.0675105485232, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI156139131, Length=237, Percent_Identity=32.0675105485232, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI156139129, Length=237, Percent_Identity=32.0675105485232, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI156139137, Length=237, Percent_Identity=31.6455696202532, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009906
- InterPro:   IPR016938 [H]

Pfam domain/function: PF07286 DUF1445 [H]

EC number: NA

Molecular weight: Translated: 30555; Mature: 30555

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIMVDSDSARLPYFNASPAEVRRLCRAGESGPVTAGMAAGYIQANIVMLPASLADAFHE
CEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEHHHHCCEEEEEEEEECHHHHHHHHH
FCLRNPKPCPLVGMSRPGDYRLPSLGADLDLRTDLPLYRVWRDGNMVAETGDIRDQWRDD
HHHCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCEEEEEECCCEEEECCCHHHHHHHH
LVTFALGCSFSFENALTACDVPMRHLQLGRGVPVYRTNIACTPVGPFAGPVVVSMRPFRS
HEEHHHCCCCCHHCCCCCCCCCHHHHHHCCCCCEEECCEEECCCCCCCCCEEEEECCCCC
HHAIRAVQISSLIPLAHGAPIQIGFPEEIGIADIDSPDYGDPTEVADDELPVFWACGVTP
CCEEEEEEHHHHCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCH
QAVLAASKPEFAITHAPGAMLVTDMPIEGYEDLVASHRGRII
HHHEECCCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MRIMVDSDSARLPYFNASPAEVRRLCRAGESGPVTAGMAAGYIQANIVMLPASLADAFHE
CEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEHHHHCCEEEEEEEEECHHHHHHHHH
FCLRNPKPCPLVGMSRPGDYRLPSLGADLDLRTDLPLYRVWRDGNMVAETGDIRDQWRDD
HHHCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCEEEEEECCCEEEECCCHHHHHHHH
LVTFALGCSFSFENALTACDVPMRHLQLGRGVPVYRTNIACTPVGPFAGPVVVSMRPFRS
HEEHHHCCCCCHHCCCCCCCCCHHHHHHCCCCCEEECCEEECCCCCCCCCEEEEECCCCC
HHAIRAVQISSLIPLAHGAPIQIGFPEEIGIADIDSPDYGDPTEVADDELPVFWACGVTP
CCEEEEEEHHHHCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCH
QAVLAASKPEFAITHAPGAMLVTDMPIEGYEDLVASHRGRII
HHHEECCCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA