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The map label for this gene is fabA [H]

Identifier: 162139370

GI number: 162139370

Start: 3788036

End: 3788545

Strand: Direct

Name: fabA [H]

Synonym: RD1_3923

Alternate gene names: 162139370

Gene position: 3788036-3788545 (Clockwise)

Preceding gene: 110681042

Following gene: 110681060

Centisome position: 91.65

GC content: 59.02

Gene sequence:

>510_bases
ATGGCCCAATACCCCACCAGTTTCGACAAAGAAGGCCTGCTAAAGTGCGCCCGCGGCGAGCTTTTCGGCCCCGGCAACGC
ACAACTGCCCGAGCCCCCCATGCTGATGATGGATCGCATCACCGAGATTTCGGACGATGCGGGCGCGAACGGAAAAGGAC
ATGTTGTCGCAGAGTTTGATATCAACCCCGATCTGTGGTTTTTCGACTGCCACTTTCCCGGCAACCCAATCATGCCCGGG
TGCCTTGGCCTTGACGGGCTTTGGCAACTGACCGGTTTCAATCTGGGCTGGCGCGGTTGGCAGGGGCGCGGTTATGCGCT
TGGCGTGGGTGAGGTGAAACTCACCGGGATGGTGCGCCCGGATCGCAAGATGCTGACCTATTACGTGGATTTCACCAAGG
CGATCCAGTCCCGGCGCTTGACAATGGGCGTGGCCAATGGCCGTGTGGAGGCAGATGGGGAAACCATCTATCGGGTTACA
GATATGAAGGTCGCGCTCTCCGAGAGTTGA

Upstream 100 bases:

>100_bases
GTTGCATGGAATCATGCCGCACCCGCGCCCTTGCAGGACCCGCAAACACGATGCTAGAGGGGTTCGACCTTTAAAGACGC
CGATCAGGAGACGCGCCAGT

Downstream 100 bases:

>100_bases
GGCAGCGCCGCGAGAAATAAAGGAGTGCGCCATGCGCCGTGTCGTCGTGACAGGTCTGGGCATCGTCTCATCCATCGGAA
ACAACGCCGACGAAGTTCTG

Product: 3-hydroxydecanoyl-(acyl carrier protein) dehydratase

Products: NA

Alternate protein names: Beta-hydroxydecanoyl thioester dehydrase [H]

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MAQYPTSFDKEGLLKCARGELFGPGNAQLPEPPMLMMDRITEISDDAGANGKGHVVAEFDINPDLWFFDCHFPGNPIMPG
CLGLDGLWQLTGFNLGWRGWQGRGYALGVGEVKLTGMVRPDRKMLTYYVDFTKAIQSRRLTMGVANGRVEADGETIYRVT
DMKVALSES

Sequences:

>Translated_169_residues
MAQYPTSFDKEGLLKCARGELFGPGNAQLPEPPMLMMDRITEISDDAGANGKGHVVAEFDINPDLWFFDCHFPGNPIMPG
CLGLDGLWQLTGFNLGWRGWQGRGYALGVGEVKLTGMVRPDRKMLTYYVDFTKAIQSRRLTMGVANGRVEADGETIYRVT
DMKVALSES
>Mature_168_residues
AQYPTSFDKEGLLKCARGELFGPGNAQLPEPPMLMMDRITEISDDAGANGKGHVVAEFDINPDLWFFDCHFPGNPIMPGC
LGLDGLWQLTGFNLGWRGWQGRGYALGVGEVKLTGMVRPDRKMLTYYVDFTKAIQSRRLTMGVANGRVEADGETIYRVTD
MKVALSES

Specific function: Necessary for the introduction of cis unsaturation into fatty acids. Catalyzed the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP [H]

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioester dehydratase family. FabA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787187, Length=168, Percent_Identity=56.547619047619, Blast_Score=191, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000794
- InterPro:   IPR010083
- InterPro:   IPR013114 [H]

Pfam domain/function: PF07977 FabA [H]

EC number: =4.2.1.60 [H]

Molecular weight: Translated: 18683; Mature: 18551

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYPTSFDKEGLLKCARGELFGPGNAQLPEPPMLMMDRITEISDDAGANGKGHVVAEFD
CCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEE
INPDLWFFDCHFPGNPIMPGCLGLDGLWQLTGFNLGWRGWQGRGYALGVGEVKLTGMVRP
CCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCEEEEEEECC
DRKMLTYYVDFTKAIQSRRLTMGVANGRVEADGETIYRVTDMKVALSES
CCEEEEEEEEHHHHHHHCEEEEEECCCEEECCCCEEEEEEEEEEEEECC
>Mature Secondary Structure 
AQYPTSFDKEGLLKCARGELFGPGNAQLPEPPMLMMDRITEISDDAGANGKGHVVAEFD
CCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEE
INPDLWFFDCHFPGNPIMPGCLGLDGLWQLTGFNLGWRGWQGRGYALGVGEVKLTGMVRP
CCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCEEEEEEECC
DRKMLTYYVDFTKAIQSRRLTMGVANGRVEADGETIYRVTDMKVALSES
CCEEEEEEEEHHHHHHHCEEEEEECCCEEECCCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA