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The map label for this gene is 110681042

Identifier: 110681042

GI number: 110681042

Start: 3770951

End: 3771589

Strand: Direct

Name: 110681042

Synonym: RD1_3905

Alternate gene names: NA

Gene position: 3770951-3771589 (Clockwise)

Preceding gene: 110681041

Following gene: 162139370

Centisome position: 91.24

GC content: 55.87

Gene sequence:

>639_bases
ATGAAACTGACGTCAATCGCGCTCGCCCTATTTGCATTCAGTACAACGTTGTGCAGCGCCACGACATACACGTTCGACGT
AACGGCTCGAGTAGATGGTGCATTTCTGCGTAACCCGGCCGAAAATGCACAGGTGGTCAAAGGCGGGGACCTCAACGTGA
GGATGACCTATTCCTTTCCACCCTCGCGGCAGTTTGGCGGCGATTACTTGTATAACCCGGGATTGGAAACGCTGACCCTC
ACAACGCCGCAAGGCTACAGGCTCGTGCTGGACAACCGCCTCGTGTCGATCGCCAGCATCGGCACAACAGATTTCTTTAC
TGTGCAGAGTTTCCTGTCTGAGGACCCGAATGGGTGGAACTTCGCGATGGATATCAACGCTACGGGGTGGCGCAATGGCG
ACACAAGCCTGCCAACCATGTTTCCGTCAACTTTCGACAGCGCGTTTCTCACGGCCTATTTTCTTGACGAACAGGATCAA
ATTCAGGGGATAGATGCGACGATCCTGTCCGTGACGCCCGCCACTGTTCCGCTACCCGCATCGGGCCTGTTGTTTGCATC
AGCCGGGCTGATGATCGTCTGGCGACAGCGTAAAACTGCGAGGCTGCAACGTCGCAACGCAAGCCTGATCTGCGCCTGA

Upstream 100 bases:

>100_bases
CGCTGGAAATTCTAAGCAAGCATGCCATGAGCTGACACGTTGGACGTATCGCATCTTTCCCATTAACCTTTGTTATCGGC
GGTCTTCTGGGAGGAATAAG

Downstream 100 bases:

>100_bases
GTGCGGTTCAGGCAAACTCCCCCATCTCGAACCCAAGCGCTTTGGCAACGGTAAAGATATCCTTGTCGCCACGCCCGCAC
ATGTTCATGCAGATGATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKLTSIALALFAFSTTLCSATTYTFDVTARVDGAFLRNPAENAQVVKGGDLNVRMTYSFPPSRQFGGDYLYNPGLETLTL
TTPQGYRLVLDNRLVSIASIGTTDFFTVQSFLSEDPNGWNFAMDINATGWRNGDTSLPTMFPSTFDSAFLTAYFLDEQDQ
IQGIDATILSVTPATVPLPASGLLFASAGLMIVWRQRKTARLQRRNASLICA

Sequences:

>Translated_212_residues
MKLTSIALALFAFSTTLCSATTYTFDVTARVDGAFLRNPAENAQVVKGGDLNVRMTYSFPPSRQFGGDYLYNPGLETLTL
TTPQGYRLVLDNRLVSIASIGTTDFFTVQSFLSEDPNGWNFAMDINATGWRNGDTSLPTMFPSTFDSAFLTAYFLDEQDQ
IQGIDATILSVTPATVPLPASGLLFASAGLMIVWRQRKTARLQRRNASLICA
>Mature_212_residues
MKLTSIALALFAFSTTLCSATTYTFDVTARVDGAFLRNPAENAQVVKGGDLNVRMTYSFPPSRQFGGDYLYNPGLETLTL
TTPQGYRLVLDNRLVSIASIGTTDFFTVQSFLSEDPNGWNFAMDINATGWRNGDTSLPTMFPSTFDSAFLTAYFLDEQDQ
IQGIDATILSVTPATVPLPASGLLFASAGLMIVWRQRKTARLQRRNASLICA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23196; Mature: 23196

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTSIALALFAFSTTLCSATTYTFDVTARVDGAFLRNPAENAQVVKGGDLNVRMTYSFP
CCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHCCCCCCCEEEECCCEEEEEEECCC
PSRQFGGDYLYNPGLETLTLTTPQGYRLVLDNRLVSIASIGTTDFFTVQSFLSEDPNGWN
CCCCCCCCEEECCCCCEEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCE
FAMDINATGWRNGDTSLPTMFPSTFDSAFLTAYFLDEQDQIQGIDATILSVTPATVPLPA
EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCEEEEEECCCCCCCCC
SGLLFASAGLMIVWRQRKTARLQRRNASLICA
CCCEEECCCEEEEEECCHHHHHHHCCCEEEEC
>Mature Secondary Structure
MKLTSIALALFAFSTTLCSATTYTFDVTARVDGAFLRNPAENAQVVKGGDLNVRMTYSFP
CCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHCCCCCCCEEEECCCEEEEEEECCC
PSRQFGGDYLYNPGLETLTLTTPQGYRLVLDNRLVSIASIGTTDFFTVQSFLSEDPNGWN
CCCCCCCCEEECCCCCEEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCE
FAMDINATGWRNGDTSLPTMFPSTFDSAFLTAYFLDEQDQIQGIDATILSVTPATVPLPA
EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCEEEEEECCCCCCCCC
SGLLFASAGLMIVWRQRKTARLQRRNASLICA
CCCEEECCCEEEEEECCHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA