Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is ybfG [H]

Identifier: 161984971

GI number: 161984971

Start: 566834

End: 567244

Strand: Reverse

Name: ybfG [H]

Synonym: SBO_0552

Alternate gene names: 161984971

Gene position: 567244-566834 (Counterclockwise)

Preceding gene: 82543125

Following gene: 82543120

Centisome position: 12.55

GC content: 44.04

Gene sequence:

>411_bases
TTGCCACGAGATCCAGTAAGTTGGACACAACGCCCTGAATTCGCAGGCGTGCGGGCTTTACCCATCGCTGACGATGTCGC
AGGGGGAATTTTTGCTCTTAATGGTGGCGATCTTGGGGAAGATACTGGCTGCGTTTATTATTTTGCGCCAGATACGCTGA
ATTGGGAAAGTCTGGAAGTTGGATATTCTGAGTTTCTTCAGTGGGCATTATCCGGTGATTTAGATACCTTCTATGAAAAT
GTACGATGGCAGCAATGGCGAGAAGACGTAATAAAATTATCGGCAACGGAAGCCTTCACGTTCTACCCTTTCTTATGGGT
ACAAAGTGAAGAAGCAAGAACAAGAAAAGTTATTTCGCTTACTGAACTCTGGGAAATGCAGTATCAAATGAAAGAAACAT
TCACGCAATAA

Upstream 100 bases:

>100_bases
GGTGACAACAAAATCACCGATGGGTGCGCTTGTCTATGGCTCCGGAGGTCTGCTGATTGATAATGGTTGGTTACGCATAG
CAGGATCTGGTCACCCCCGG

Downstream 100 bases:

>100_bases
GACATGTTCAGGTCCGGGTTTCATTCCCGGACTCACTATTTTAATGTGTATTTATCGCTTTCAATTCTTGCTGGCAATTT
TCTGACTGGCAGCGTCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MPRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYEN
VRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ

Sequences:

>Translated_136_residues
MPRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYEN
VRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ
>Mature_135_residues
PRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYENV
RWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021239 [H]

Pfam domain/function: PF10946 DUF2625 [H]

EC number: NA

Molecular weight: Translated: 15812; Mature: 15681

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEV
CCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHC
GYSEFLQWALSGDLDTFYENVRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISL
CHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHH
TELWEMQYQMKETFTQ
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEV
CCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHC
GYSEFLQWALSGDLDTFYENVRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISL
CHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHH
TELWEMQYQMKETFTQ
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083177; 8905232; 9278503 [H]