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The map label for this gene is ydeD [C]

Identifier: 161869708

GI number: 161869708

Start: 732520

End: 733404

Strand: Direct

Name: ydeD [C]

Synonym: NMCC_0728

Alternate gene names: 161869708

Gene position: 732520-733404 (Clockwise)

Preceding gene: 161869707

Following gene: 161869712

Centisome position: 34.02

GC content: 54.58

Gene sequence:

>885_bases
GTGGTCGGTAACGGCAAAAAATATGCCGCACCATTGCTGGTGCTGGGTTGCGTGGTGTTCGGTCTGGGCAGTCTGATTGT
CAGATCCGTCCCCGTCGGTTCGTATGCAATCGCATTTTGGCGGTTGCTGATTTCGGTGTTCGTATTTTGGTTTTTAGCAC
GGTTTTTCGGGCAAAAATTCCCAAAAAACAGGAAAACCGTCCGATATGCCCTGACGGCGGGCGTGTTTCTCGCTTTCGAT
TTGGCGTTGTGGCACGAAAGCATACACGCGGTCGGGCCGGGTGTTTCCACCCTGCTCAACAGCCTGCAAATCTTTTTCTT
GTCGGCAATCGGTGTTTTCTTTTTCGGCGAGCGTTTGAGCGGGCTGAAAAAGGCAGGCTTAATATCGGCAGTTGCCGGTG
TGGCGATGATTGCCGGTGCGGAATTCGGCTACAACGGTAATGCGGTTTGGGGATTCGTCAGCGGTTTGGTGTCCGGGCTG
ATGCTTGCCCTGTCGATGGTGTTCGTCCGCAAGACTCATGAAGTCGAGCCGGTGGCGCTTTTCCCTTCAATGATGATTTT
GAGTTTAGGCGGCGCGGTATCGTTGGTTGTTCCGGCATTGCTGATGGATGGCGGCGCGCTTTATCCGACGACTTGGAAAG
ATGCGGGTTTGGTGCTTGTGTACGGCGTGGTGATGCAGTGCTTCGCGTGGGCGATGGTTGCCTATGCGATTCCGCTGCTT
TCGCTGTCGCTGACGGGGCTGCTGCTTTTGTCCGAACCGGTTGCCGCCCTGTTCATCGATTATTTCGGATTGGGCAAACC
GATTGAAGGCGTGCAGTGGGCAGGGGTGGCGCTGACGCTTTCGGCAATTTATCTCGGTTCGCTGAAACAGCAGTCTTCAC
ATTGA

Upstream 100 bases:

>100_bases
CCGGGTGCAGCCGGGGCTTTGGGCTTCAGACGGCATATTTTCGGAATGGCGGCATTCTTGCCGTCGGCGCGGCAGCCGTA
TGGGGAAGGGAGGGGATATT

Downstream 100 bases:

>100_bases
TTTCATCAGGGCAATATTGGCAGTTCGCCGTGCAAAACCTGCGTTACCGGACTGATATAGTGAATTAAATTTAAACCGGT
ACAGCGTTGGCTCGCCTTGC

Product: integral membrane protein

Products: NA

Alternate protein names: Permease Of Drug/Metabolite Transporter Superfamily; DMT Superfamily Efflux Pump

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAIAFWRLLISVFVFWFLARFFGQKFPKNRKTVRYALTAGVFLAFD
LALWHESIHAVGPGVSTLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFVSGLVSGL
MLALSMVFVRKTHEVEPVALFPSMMILSLGGAVSLVVPALLMDGGALYPTTWKDAGLVLVYGVVMQCFAWAMVAYAIPLL
SLSLTGLLLLSEPVAALFIDYFGLGKPIEGVQWAGVALTLSAIYLGSLKQQSSH

Sequences:

>Translated_294_residues
MVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAIAFWRLLISVFVFWFLARFFGQKFPKNRKTVRYALTAGVFLAFD
LALWHESIHAVGPGVSTLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFVSGLVSGL
MLALSMVFVRKTHEVEPVALFPSMMILSLGGAVSLVVPALLMDGGALYPTTWKDAGLVLVYGVVMQCFAWAMVAYAIPLL
SLSLTGLLLLSEPVAALFIDYFGLGKPIEGVQWAGVALTLSAIYLGSLKQQSSH
>Mature_294_residues
MVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAIAFWRLLISVFVFWFLARFFGQKFPKNRKTVRYALTAGVFLAFD
LALWHESIHAVGPGVSTLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFVSGLVSGL
MLALSMVFVRKTHEVEPVALFPSMMILSLGGAVSLVVPALLMDGGALYPTTWKDAGLVLVYGVVMQCFAWAMVAYAIPLL
SLSLTGLLLLSEPVAALFIDYFGLGKPIEGVQWAGVALTLSAIYLGSLKQQSSH

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31326; Mature: 31326

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA