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The map label for this gene is petB [H]

Identifier: 161869140

GI number: 161869140

Start: 134234

End: 135583

Strand: Direct

Name: petB [H]

Synonym: NMCC_0134

Alternate gene names: 161869140

Gene position: 134234-135583 (Clockwise)

Preceding gene: 161869139

Following gene: 161869141

Centisome position: 6.23

GC content: 50.44

Gene sequence:

>1350_bases
ATGGCAAACCAAACCAATAGCAAAGCAAAAGCATTGTTAGGCTGGATGGACGCTCGTTTCCCCCTGTCTAAAATGTGGAA
TGAGCATTTGGCTCAATACTACGCACCGAAAAACTTTAATTTTTGGTACTACTTCGGCTCTTTAGCCTTGCTTGTCCTCG
TGATTCAAATCGTCAGCGGTATTTTCCTGACGATGAACTACAAACCGGACGGTAACCTGAATGCCTACCATCTGCCTGCT
GCCTTTACTGCAGTCGAGTACATCATGCGCGACGTGTCCGGCGGTTGGATTATCCGCTACATGCATTCCACCGGCGCATC
TTTCTTCTTCATTGTTGTTTATCTGCACATGTTCCGTGGTTTGATTTACGGTTCGTACAAAAAACCCCGTGAGTTGGTGT
GGATTTTCGGTTCTCTGATTTTCTTGGCATTGATGGCGGAAGCCTTTATGGGCTACCTGCTGCCTTGGGGTCAGATGTCC
TTTTGGGGGGCGCAGGTAATTATTAACCTGTTCTCCGCCATCCCTGTTATCGGTCCGGATTTGTCCACTTGGATTCGCGG
CGACTTCAACGTTTCCGACGTTACCCTGAACCGTTTCTTTGCCCTGCACGTTATCGCGGTACCTCTGGTATTGCTCGGCT
TGGTTGTGGCGCACATCATCGCCCTGCACGAAGTGGGTTCTAACAACCCTGACGGCGTTGAAATCAAGAAAAACAAAGAC
GAAAACGGTATCCCGCGCGACGGTATCCCATTCCATCCTTACTATACCGTTAAAGACATCTTGGGTGTGGTTGTATTCCT
GATTGTCTTCTGTGCCGTATTGTTCTTCGCACCGGAAGGCGGCGGCTACTTCCTCGAAGCGCCGAACTTCGATGCGGCAA
ATGCGCTGAAAACACCCCCGCACATTGCGCCGGTATGGTATTTCACACCGTTCTACGCCATTTTGCGTGCGATTCCCTCG
TTCTTGGGAACGCAGGTTTGGGGTGTAATCGGTATGGGCGCGGCGGTCGTGTTGATTGCCCTGCTGCCTTGGCTGGATAG
GGGCGAGGTGAAATCCGTCCGTTACCGCGGTCCGATTTTCAAAACCGCATTGGTCTTGTTCATCATTTCCTTTATCGGTT
TGGGTATTTTGGGCGCGATGGTGGCAACCGATACGCGTACTTTGGTCGCGCGCATCCTGTCCTTCGTCTATTTCGCATTC
TTCCTGGGTATGCCGTTCTATACCAAGCTGGATAAAAACAAACCGGTTCCCGAACGCGTAACCATGAGCACCGCCAAACA
AAAAATCATGTTCTTTGTTTACGTCGGCATTACCGCCGTGGGTGCTTACCTGTTTGCAACCAACATCTGA

Upstream 100 bases:

>100_bases
AGGTGTTCCTGCCCCGACCAACCTGGTTGTCCCGCCATATAAATACTTGAGCGACACAACTATCTTGGTGGGCGAAGACT
AAGAATAAGGAACGATAATT

Downstream 100 bases:

>100_bases
TGAGGGCAGTCAAAATGAAACAAGCTATGAAAAATTGGTTTGCTGCCTTGCTGTTGGCAGTACCCATGGGTGCGGCATTT
GCTTCGGGCGGTCATGCACA

Product: cytochrome B

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPA
AFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKKNKD
ENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFFAPEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPS
FLGTQVWGVIGMGAAVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARILSFVYFAF
FLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI

Sequences:

>Translated_449_residues
MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPA
AFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKKNKD
ENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFFAPEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPS
FLGTQVWGVIGMGAAVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARILSFVYFAF
FLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI
>Mature_448_residues
ANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAA
FTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMSF
WGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKKNKDE
NGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFFAPEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSF
LGTQVWGVIGMGAAVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARILSFVYFAFF
LGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=399, Percent_Identity=40.6015037593985, Blast_Score=264, Evalue=1e-70,
Organism=Saccharomyces cerevisiae, GI6226529, Length=376, Percent_Identity=42.5531914893617, Blast_Score=264, Evalue=3e-71,
Organism=Saccharomyces cerevisiae, GI6226532, Length=248, Percent_Identity=45.1612903225806, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6226531, Length=167, Percent_Identity=49.1017964071856, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6226530, Length=152, Percent_Identity=45.3947368421053, Blast_Score=121, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 50302; Mature: 50171

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSG
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCC
IFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRG
EEEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHH
LIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMSFWGAQVIINLFSAIPVIGPD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
LSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKKNKD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
ENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFFAPEGGGYFLEAPNFDAANALKTPP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCC
HIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGAAVVLIALLPWLDRGEVKSVRYRGPIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHH
KTALVLFIISFIGLGILGAMVATDTRTLVARILSFVYFAFFLGMPFYTKLDKNKPVPERV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHH
TMSTAKQKIMFFVYVGITAVGAYLFATNI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSG
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCC
IFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRG
EEEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHH
LIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMSFWGAQVIINLFSAIPVIGPD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
LSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKKNKD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
ENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFFAPEGGGYFLEAPNFDAANALKTPP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCC
HIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGAAVVLIALLPWLDRGEVKSVRYRGPIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHH
KTALVLFIISFIGLGILGAMVATDTRTLVARILSFVYFAFFLGMPFYTKLDKNKPVPERV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHH
TMSTAKQKIMFFVYVGITAVGAYLFATNI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA