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The map label for this gene is petA [H]

Identifier: 161869139

GI number: 161869139

Start: 133634

End: 134215

Strand: Direct

Name: petA [H]

Synonym: NMCC_0133

Alternate gene names: 161869139

Gene position: 133634-134215 (Clockwise)

Preceding gene: 161869138

Following gene: 161869140

Centisome position: 6.21

GC content: 56.7

Gene sequence:

>582_bases
ATGGATAATCAAGAAATCAACAACGGCCGCCGCCGTTTCCTGACACTCGCGACCTGCGGCGCGGGCGGAGTGGCAGCATT
GGGTGTGGCAACGCCGTTTGTGGCCAGTTTTTTCCCTTCGGAAAAAGCCAAGGCCGCCGGTGCTGCCGTCGAGGTGGATG
TCAGTAAAATCGAAGCGGGTCAGCTGCTGACCGCCGAGTGGCAAGGCAAACCGATTTGGGTGCTCAACCGTACAGATCAG
CAGCTTAAAGACCTGAAAGGCCTGAACGGCGAACTTACCGATCCCAATTCCGATGCGGAACAGCAGCCGGAGTATGCTAA
AAACGAGACCCGTTCGATTAAGCCGAACATCCTTGTCGCCATCGGTATCTGCACCCATTTGGGCTGCTCGCCCACCTTCC
GTCCCGACATTGCCCCCGCCGATTTGGGTGCAGACTGGAAAGGCGGCTTCTTCTGCCCCTGCCACGGTTCGAAATTCGAC
TTGGCCGGCCGCGTATATAAAGGTGTTCCTGCCCCGACCAACCTGGTTGTCCCGCCATATAAATACTTGAGCGACACAAC
TATCTTGGTGGGCGAAGACTAA

Upstream 100 bases:

>100_bases
TTTACCTTATTTTAAATAATGCTTTGAGTATCACTGCAAACTGGGTAAAATTGCAACGTTTAATGGCTCGGTATTCCCAA
AATATTAGGACGACTGAATA

Downstream 100 bases:

>100_bases
GAATAAGGAACGATAATTATGGCAAACCAAACCAATAGCAAAGCAAAAGCATTGTTAGGCTGGATGGACGCTCGTTTCCC
CCTGTCTAAAATGTGGAATG

Product: ubiquinol-cytochrome c reductase iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKAAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQ
QLKDLKGLNGELTDPNSDAEQQPEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED

Sequences:

>Translated_193_residues
MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKAAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQ
QLKDLKGLNGELTDPNSDAEQQPEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED
>Mature_193_residues
MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKAAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQ
QLKDLKGLNGELTDPNSDAEQQPEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=198, Percent_Identity=35.8585858585859, Blast_Score=110, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17540418, Length=193, Percent_Identity=38.3419689119171, Blast_Score=110, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6320811, Length=192, Percent_Identity=34.8958333333333, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24580896, Length=163, Percent_Identity=39.2638036809816, Blast_Score=110, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 20633; Mature: 20633

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKAAGAAVEVDVSKIEAG
CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEHHHCCCC
QLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQPEYAKNETRSIKPNILVA
CEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEE
IGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFDLAGRVYKGVPAPTNLVVPPY
EEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCCCCCEEECCH
KYLSDTTILVGED
HHHCCCEEEEECC
>Mature Secondary Structure
MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKAAGAAVEVDVSKIEAG
CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEHHHCCCC
QLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQPEYAKNETRSIKPNILVA
CEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEE
IGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFDLAGRVYKGVPAPTNLVVPPY
EEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCCCCCEEECCH
KYLSDTTILVGED
HHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA