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The map label for this gene is petC [H]

Identifier: 161869141

GI number: 161869141

Start: 135598

End: 136386

Strand: Direct

Name: petC [H]

Synonym: NMCC_0135

Alternate gene names: 161869141

Gene position: 135598-136386 (Clockwise)

Preceding gene: 161869140

Following gene: 161869142

Centisome position: 6.3

GC content: 48.8

Gene sequence:

>789_bases
ATGAAACAAGCTATGAAAAATTGGTTTGCTGCCTTGCTGTTGGCAGTACCCATGGGTGCGGCATTTGCTTCGGGCGGTCA
TGCACACTATGAGAAAGTCGATATCGATTTGCGCGACCAAGTCAGCCTGCAGCGCGGCGCACAAATCTTTACCAACTATT
GCCTGTCCTGCCACTCGGCAAGCGGTATGCGTTTCAACCGTTTGAAAGACATCGGTTTGACTGACGAAGAAATCAAGAAA
AACCTGATGTTTACCACCGATAATGTCGGCGATGTCATGCATTCGGCGATGAACCCGAAAGATGCGGCAAAATGGTTTGG
TGCTGCTCCGCCCGATTTGACATTGATTGCGCGTTCCAAAGGTGCAGACTACCTTTACGCTTATATGCGCGGCTTCTATA
AAGATCCGACCCGTCCGAGCGGCTGGAACAATACTGTATTCGATAAAGTCGGTATGCCCCACCCGTTGTGGGAACAGCAA
GGCGTTCAAGCCGTTGAGTTGGATGCCAAAGGTCAGCCGGTTATGGTAAAAGACGAACACGGCGAGATGAAGCCTAAGCT
GTATTGGGAATCTACCGGTTTGCACAGCCGCCGTCTGCCTAACGGCAAAGTGATCCAAAAAGAGTACGACGCATATGTAC
GCGATTTGGTCAATTACCTTGTGTACATGGGCGAACCTGCACAACTGCAACGCAAACGTATAGGCTATGTCGTGATGATT
TTCCTATTTGCGGTTATGCTGCCTTTGGCGTATTTCCTGAAAAAAGAATATTGGAAAGACGTACACTAA

Upstream 100 bases:

>100_bases
TGAGCACCGCCAAACAAAAAATCATGTTCTTTGTTTACGTCGGCATTACCGCCGTGGGTGCTTACCTGTTTGCAACCAAC
ATCTGATGAGGGCAGTCAAA

Downstream 100 bases:

>100_bases
GCGTTTGGAACAAAAGGGCAAATCCTTTAGGGTTTGCCCTTTTTTCATTTTGCCTGCCGTTTGAAAAGCCTGAATCCGTA
TGCCGTCTGAACATAGCTGC

Product: cytochrome C1 precursor

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQRGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKK
NLMFTTDNVGDVMHSAMNPKDAAKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVNYLVYMGEPAQLQRKRIGYVVMI
FLFAVMLPLAYFLKKEYWKDVH

Sequences:

>Translated_262_residues
MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQRGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKK
NLMFTTDNVGDVMHSAMNPKDAAKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVNYLVYMGEPAQLQRKRIGYVVMI
FLFAVMLPLAYFLKKEYWKDVH
>Mature_262_residues
MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQRGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKK
NLMFTTDNVGDVMHSAMNPKDAAKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVNYLVYMGEPAQLQRKRIGYVVMI
FLFAVMLPLAYFLKKEYWKDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 29909; Mature: 29909

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQRGAQIFTNYCLSCHSA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
SGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDAAKWFGAAPPDLTLIARSK
CCCCHHHHHCCCCCHHHHHHCCEECCCCHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCC
GADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQGVQAVELDAKGQPVMVKDEH
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHCCCEEEEECCCCCEEEEECCC
GEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVNYLVYMGEPAQLQRKRIGYVVMI
CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FLFAVMLPLAYFLKKEYWKDVH
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQRGAQIFTNYCLSCHSA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
SGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDAAKWFGAAPPDLTLIARSK
CCCCHHHHHCCCCCHHHHHHCCEECCCCHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCC
GADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQGVQAVELDAKGQPVMVKDEH
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHCCCEEEEECCCCCEEEEECCC
GEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVNYLVYMGEPAQLQRKRIGYVVMI
CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FLFAVMLPLAYFLKKEYWKDVH
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA