Click here to switch to the map view.

The map label for this gene is ybgI [C]

Identifier: 161869138

GI number: 161869138

Start: 132762

End: 133511

Strand: Direct

Name: ybgI [C]

Synonym: NMCC_0132

Alternate gene names: 161869138

Gene position: 132762-133511 (Clockwise)

Preceding gene: 161869136

Following gene: 161869139

Centisome position: 6.17

GC content: 51.6

Gene sequence:

>750_bases
ATGGTATTGCGCAGGGATTTTCTGACTTGGTGTAATGAAACATTGCAGACAGCGTTGTTTAAAGATTACGCCCCTAACGG
TTTGCAGGTTGAAGGGAGGGAATATATCGGGAAAATCGTTACGTCAGTAACGGCAAGCAGGGCAGCGATTGATTTTGCTG
TGGAGCAGAAGGCAGATTTGCTTTTGGTACATCACGGTATGTTTTGGAAAAACGAGTTGCCGACCGTTACTGGTTGGAAA
AAAGAACGGATTGCCGCACTGTTACGGCACGACATCAATATGGCAGGCTACCATCTGCCCCTAGATGCACATCCCACACT
GGGCAACAATGCCCAACTCGCCGACAGATTGGGTTTTGCGACAGAAAAACGGTTCGGCGAACAAAACCTGCTCAACTCGG
GCAGCCTGAAACAAGCCAAGACACTCGGCGCATTGGCGGCGCATATTGAAACAGTTTTGCAACGTAAGCCTGTCGTCATC
GGCAAACCCGAACGCGAAATCCGACGGGTTGCATGGTGCAGCGGCGGGGCGCAGGGGTTTTTTCAGACGGCAATAGACGA
AGGTGTCGATCTGTATTTGACGGGGGAAATCTCTGAAGCTCAATACCACCTTGCCAATGAAACGGGTACGGCTTTCATTT
CGGCAGGGCATCACGCGACGGAACGTTACGGCGTACGCGCGCTGGCAGAATCGGCGGCAGAGGTTTTCGGGTTGGAAGTG
TGCCATTTTGACGAAAACAATCCGGCTTGA

Upstream 100 bases:

>100_bases
ATATTAAAATAATTCATATGCGGGTGCAAATCGGAAAAATGTGAATTCCGGACATTTTGCGATTAGAATGCCCGCTTGTT
TAAAGCGATTAGGAAAAAAG

Downstream 100 bases:

>100_bases
GTCTTGAGAAATATCATAAAACTTTACCTTATTTTAAATAATGCTTTGAGTATCACTGCAAACTGGGTAAAATTGCAACG
TTTAATGGCTCGGTATTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVTASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWK
KERIAALLRHDINMAGYHLPLDAHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHHATERYGVRALAESAAEVFGLEV
CHFDENNPA

Sequences:

>Translated_249_residues
MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVTASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWK
KERIAALLRHDINMAGYHLPLDAHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHHATERYGVRALAESAAEVFGLEV
CHFDENNPA
>Mature_249_residues
MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVTASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWK
KERIAALLRHDINMAGYHLPLDAHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHHATERYGVRALAESAAEVFGLEV
CHFDENNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=240, Percent_Identity=51.6666666666667, Blast_Score=224, Evalue=6e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27484; Mature: 27484

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVTASRAAIDFAVEQKADL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLDAHPTLGNNAQLADRLGFA
EEEECCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHCHH
TEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVIGKPEREIRRVAWCSGGAQGF
HHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCHH
FQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHHATERYGVRALAESAAEVFGLEV
HHHHHHCCCEEEEECCCCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCEEE
CHFDENNPA
EECCCCCCC
>Mature Secondary Structure
MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVTASRAAIDFAVEQKADL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLDAHPTLGNNAQLADRLGFA
EEEECCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHCHH
TEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVIGKPEREIRRVAWCSGGAQGF
HHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCHH
FQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHHATERYGVRALAESAAEVFGLEV
HHHHHHCCCEEEEECCCCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCEEE
CHFDENNPA
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]