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The map label for this gene is xerC [C]

Identifier: 161525452

GI number: 161525452

Start: 2494433

End: 2495347

Strand: Reverse

Name: xerC [C]

Synonym: Bmul_2282

Alternate gene names: 161525452

Gene position: 2495347-2494433 (Counterclockwise)

Preceding gene: 161525479

Following gene: 161525451

Centisome position: 72.36

GC content: 55.74

Gene sequence:

>915_bases
ATGTTGAGATCCGACATGGAGCGCTATATCCAGCTACGGCGGAGCGCTGGTTTCAAGATGGCAAACGAATCGCTGATGCT
GAGCGGCTTTGTTGCTATTGCCGAAAAGCATGGTGATCAACACATTCGTATCGACCGAGTGCTGACGTGGGCGGGGCAAG
CACCGTCATCAGCACAGCGGTACCGGCGTCTCAACGTCATCCGGCACTTTGCGCAAGCACTTCAGGCTGAAGATGATCGG
CACCAGGTGCCACCACGTACTGCGTTTGGCAACTCCAGGAATCGACGACCGCCGCCCTATATCTTCAGCCAAGAGGAGAT
TGCCAAACTCATTGAAGCTGCCGGTCAGTTGAAACCGACTGGCTCTGTCCGGCCGATGATGTTTGCGACGCTATTTGGAC
TTCTGGCTGCGACAGGCTTGCGCATCTCGGAAGCCTTGAGGTTACGGTTGCAGGACATTACCGTCGATGGCTTGATGATC
CTGGAAACGAAATTCAACAAGAGTCGGTTGGTTCCGCTGCACGACACCGTCCGCGCTGCATTGGAGCGGTATCTCGTGGT
GCGCACACGCACTGCGACGAGCACCGATGCTTTGTTTGTCGGCACCAATGGGAAAGCGCCTGGCTACAGGGGTGTGAAGG
ATGTGTTCGTTCGTCTGGTCACTGTTATGGGGCTGCAACAGGCCCGAAATGGCGGTCTTCCCCACATCCACGATCTTCGG
CACACACTGGCCGTTCGTAGCCTGGAACAATTCCGTGGTGACCGGAATGCCATTTCTCGCCATATGACGGCATTGAGCAC
CTACCTTGGGCACACCAAAGTAACGGACACCTACTGGTACCTTGAGGCAACGCCGGTCTTGCTTGGGCAAATTGCTGAAG
CAGCAGAAACGCTGCATAGGGAGCAAGACCTATGA

Upstream 100 bases:

>100_bases
CAGTGTTGCGGCATCAATCACCCGACACCACCGCGCACTATGCCAAGGTCGATGTCCAGATGCTGCGTGAGATCGCCCAA
CCATGGCCGGGAGGTGCATC

Downstream 100 bases:

>100_bases
ACGATCTCGCCACCCATCTCAGCGGTTTCCTCCGGGAGCATCTTCCTGCGGAACGCAATGCCAGCCAGCACACCTGTGAA
GCGTACGCCTATAGCTTCCA

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MLRSDMERYIQLRRSAGFKMANESLMLSGFVAIAEKHGDQHIRIDRVLTWAGQAPSSAQRYRRLNVIRHFAQALQAEDDR
HQVPPRTAFGNSRNRRPPPYIFSQEEIAKLIEAAGQLKPTGSVRPMMFATLFGLLAATGLRISEALRLRLQDITVDGLMI
LETKFNKSRLVPLHDTVRAALERYLVVRTRTATSTDALFVGTNGKAPGYRGVKDVFVRLVTVMGLQQARNGGLPHIHDLR
HTLAVRSLEQFRGDRNAISRHMTALSTYLGHTKVTDTYWYLEATPVLLGQIAEAAETLHREQDL

Sequences:

>Translated_304_residues
MLRSDMERYIQLRRSAGFKMANESLMLSGFVAIAEKHGDQHIRIDRVLTWAGQAPSSAQRYRRLNVIRHFAQALQAEDDR
HQVPPRTAFGNSRNRRPPPYIFSQEEIAKLIEAAGQLKPTGSVRPMMFATLFGLLAATGLRISEALRLRLQDITVDGLMI
LETKFNKSRLVPLHDTVRAALERYLVVRTRTATSTDALFVGTNGKAPGYRGVKDVFVRLVTVMGLQQARNGGLPHIHDLR
HTLAVRSLEQFRGDRNAISRHMTALSTYLGHTKVTDTYWYLEATPVLLGQIAEAAETLHREQDL
>Mature_304_residues
MLRSDMERYIQLRRSAGFKMANESLMLSGFVAIAEKHGDQHIRIDRVLTWAGQAPSSAQRYRRLNVIRHFAQALQAEDDR
HQVPPRTAFGNSRNRRPPPYIFSQEEIAKLIEAAGQLKPTGSVRPMMFATLFGLLAATGLRISEALRLRLQDITVDGLMI
LETKFNKSRLVPLHDTVRAALERYLVVRTRTATSTDALFVGTNGKAPGYRGVKDVFVRLVTVMGLQQARNGGLPHIHDLR
HTLAVRSLEQFRGDRNAISRHMTALSTYLGHTKVTDTYWYLEATPVLLGQIAEAAETLHREQDL

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 34277; Mature: 34277

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSDMERYIQLRRSAGFKMANESLMLSGFVAIAEKHGDQHIRIDRVLTWAGQAPSSAQR
CCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCCEEEHHHHEEECCCCCHHHHH
YRRLNVIRHFAQALQAEDDRHQVPPRTAFGNSRNRRPPPYIFSQEEIAKLIEAAGQLKPT
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCC
GSVRPMMFATLFGLLAATGLRISEALRLRLQDITVDGLMILETKFNKSRLVPLHDTVRAA
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
LERYLVVRTRTATSTDALFVGTNGKAPGYRGVKDVFVRLVTVMGLQQARNGGLPHIHDLR
HHHHHHHEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
HTLAVRSLEQFRGDRNAISRHMTALSTYLGHTKVTDTYWYLEATPVLLGQIAEAAETLHR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECEEEEEECCHHHHHHHHHHHHHHHH
EQDL
HCCC
>Mature Secondary Structure
MLRSDMERYIQLRRSAGFKMANESLMLSGFVAIAEKHGDQHIRIDRVLTWAGQAPSSAQR
CCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCCEEEHHHHEEECCCCCHHHHH
YRRLNVIRHFAQALQAEDDRHQVPPRTAFGNSRNRRPPPYIFSQEEIAKLIEAAGQLKPT
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCC
GSVRPMMFATLFGLLAATGLRISEALRLRLQDITVDGLMILETKFNKSRLVPLHDTVRAA
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
LERYLVVRTRTATSTDALFVGTNGKAPGYRGVKDVFVRLVTVMGLQQARNGGLPHIHDLR
HHHHHHHEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
HTLAVRSLEQFRGDRNAISRHMTALSTYLGHTKVTDTYWYLEATPVLLGQIAEAAETLHR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECEEEEEECCHHHHHHHHHHHHHHHH
EQDL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]