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The map label for this gene is arrD [H]

Identifier: 161525479

GI number: 161525479

Start: 2523782

End: 2524246

Strand: Reverse

Name: arrD [H]

Synonym: Bmul_2309

Alternate gene names: 161525479

Gene position: 2524246-2523782 (Counterclockwise)

Preceding gene: 161525480

Following gene: 161525452

Centisome position: 73.2

GC content: 66.24

Gene sequence:

>465_bases
GTGATTGCGGTACCCCAAGCGGCCATCGAGCTGGCCAAACGCTTCGAGGGCTTCCACCGCGTTCCAAAGCACGATCCCAA
CCGCGCCTATCCGTACATCTGTCCGGCCGGCTACTGGACCATCGGCTACGGCCACCTCTGCGATCCGAAGCACCCACCGA
TCACGGAGACCGACGCAGAGCGCTACCTGGCTGCCGACCTCATGACGGCATTGAACGCGACGCTGCGCTACTGCCCGGTG
CTGGCCACCGAGCCAGAAAAGCGACTCGCGGCCATCGTCGACTTCACCTTCAACCTCGGCGCGGGGCGACTTCAAACGTC
GACGCTGCGGCGGCGGATAAACCAGCGGGACTGGCATAGTGCGGGCCAAGAGCTGCGGCGCTGGGTGTATGGCGGTGGCA
AGGTACTGCCGGGGCTTGTCACGCGGCGAGAGGCCGAGGCGACTTGCCTGCTCCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
GCGCCGCGATCCTCCACGCGTGGACCGACGCCGATCAGGCGCTGTGGGCCGGGGTGCTGAACTTCTGGTTCCTCGGCCGC
GTGTTCGACCGGGTGCGGCC

Downstream 100 bases:

>100_bases
TAGACCGGGTCGCCTCGATCAAATTCCCGGTTGCAGCTCCACACGCACCTCGCGCGATTTGCCGGCCCGTTCCACTGACA
AGACCACCACATCGCCGACC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIAVPQAAIELAKRFEGFHRVPKHDPNRAYPYICPAGYWTIGYGHLCDPKHPPITETDAERYLAADLMTALNATLRYCPV
LATEPEKRLAAIVDFTFNLGAGRLQTSTLRRRINQRDWHSAGQELRRWVYGGGKVLPGLVTRREAEATCLLRAA

Sequences:

>Translated_154_residues
MIAVPQAAIELAKRFEGFHRVPKHDPNRAYPYICPAGYWTIGYGHLCDPKHPPITETDAERYLAADLMTALNATLRYCPV
LATEPEKRLAAIVDFTFNLGAGRLQTSTLRRRINQRDWHSAGQELRRWVYGGGKVLPGLVTRREAEATCLLRAA
>Mature_154_residues
MIAVPQAAIELAKRFEGFHRVPKHDPNRAYPYICPAGYWTIGYGHLCDPKHPPITETDAERYLAADLMTALNATLRYCPV
LATEPEKRLAAIVDFTFNLGAGRLQTSTLRRRINQRDWHSAGQELRRWVYGGGKVLPGLVTRREAEATCLLRAA

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=123, Percent_Identity=42.2764227642276, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 17330; Mature: 17330

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVPQAAIELAKRFEGFHRVPKHDPNRAYPYICPAGYWTIGYGHLCDPKHPPITETDAE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHH
RYLAADLMTALNATLRYCPVLATEPEKRLAAIVDFTFNLGAGRLQTSTLRRRINQRDWHS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHH
AGQELRRWVYGGGKVLPGLVTRREAEATCLLRAA
HHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MIAVPQAAIELAKRFEGFHRVPKHDPNRAYPYICPAGYWTIGYGHLCDPKHPPITETDAE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHH
RYLAADLMTALNATLRYCPVLATEPEKRLAAIVDFTFNLGAGRLQTSTLRRRINQRDWHS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHH
AGQELRRWVYGGGKVLPGLVTRREAEATCLLRAA
HHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]