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The map label for this gene is fimA [H]

Identifier: 161524785

GI number: 161524785

Start: 1781547

End: 1782071

Strand: Reverse

Name: fimA [H]

Synonym: Bmul_1612

Alternate gene names: 161524785

Gene position: 1782071-1781547 (Counterclockwise)

Preceding gene: 161524787

Following gene: 161524784

Centisome position: 51.68

GC content: 64.76

Gene sequence:

>525_bases
ATGAAAAAGACTCTCCTGACCGCCGCCGCACTCGCCGTTCTGTCCACGTCCGCTTTCGCGGCGGGCGCAAACAGCGGCAC
CGGCACGATCAACTTCACCGGCGAAATCGTCGCCGGTGCATGCGGCATCGATTCGGGTTCGGACAACCAGACCGTGAACC
TCGGCAAGGTGCCGACCAACGTGTTCAAGCAGGCCGGCGACAAGTCGACCGCAACCAACTTCGACATCAAGCTGACCGAC
TGCGACACGAGCGTCGCGCAGAACGCGTTCTTCACGTTCACGGGCACGTCGAGCGCCGGCCAGCCGAAGCTGTTCGCGAC
GATCGGCTCCGCGCAGAACGTCGGCATCCGCCTGCAAAGCGCGTCGGGCGAATACCTCGACAACGGCGTCGAGCAGAAGG
CGCCGACCGTGCTGCAGAACGGCACGAACATCGCTCGCTTCGCGGCGATGTACGAAGCGGTCGCGGCCGACGTGAAGCCC
GGCACGGCCGACGGCGTCGCCAACTTCACGGTTCGCTACCAGTAA

Upstream 100 bases:

>100_bases
ATCTCGATAATGCCGCCTCGTGACGGACGGGAGCCGACCACACGCTACCGAATGCGTCCGCCACGTCGTTCTTCCCATTT
GCAATTCATACGGAAACGCC

Downstream 100 bases:

>100_bases
GCGCCGGTTCGGGAGGACGCGATGTGCGCATCGTTCCTCCCGCATTGCTCCGATTTCCCTTCGTCCCACGACTTTCCCGT
AGCGCCGCGTGCGAATCAGA

Product: fimbrial protein

Products: NA

Alternate protein names: Type-1A pilin [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKKTLLTAAALAVLSTSAFAAGANSGTGTINFTGEIVAGACGIDSGSDNQTVNLGKVPTNVFKQAGDKSTATNFDIKLTD
CDTSVAQNAFFTFTGTSSAGQPKLFATIGSAQNVGIRLQSASGEYLDNGVEQKAPTVLQNGTNIARFAAMYEAVAADVKP
GTADGVANFTVRYQ

Sequences:

>Translated_174_residues
MKKTLLTAAALAVLSTSAFAAGANSGTGTINFTGEIVAGACGIDSGSDNQTVNLGKVPTNVFKQAGDKSTATNFDIKLTD
CDTSVAQNAFFTFTGTSSAGQPKLFATIGSAQNVGIRLQSASGEYLDNGVEQKAPTVLQNGTNIARFAAMYEAVAADVKP
GTADGVANFTVRYQ
>Mature_174_residues
MKKTLLTAAALAVLSTSAFAAGANSGTGTINFTGEIVAGACGIDSGSDNQTVNLGKVPTNVFKQAGDKSTATNFDIKLTD
CDTSVAQNAFFTFTGTSSAGQPKLFATIGSAQNVGIRLQSASGEYLDNGVEQKAPTVLQNGTNIARFAAMYEAVAADVKP
GTADGVANFTVRYQ

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1790769, Length=154, Percent_Identity=42.2077922077922, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789422, Length=188, Percent_Identity=35.1063829787234, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI87082421, Length=176, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI87081753, Length=153, Percent_Identity=34.640522875817, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1786746, Length=176, Percent_Identity=30.6818181818182, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081804, Length=185, Percent_Identity=31.8918918918919, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17759; Mature: 17759

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLTAAALAVLSTSAFAAGANSGTGTINFTGEIVAGACGIDSGSDNQTVNLGKVPTN
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCCCEEEECCCCHH
VFKQAGDKSTATNFDIKLTDCDTSVAQNAFFTFTGTSSAGQPKLFATIGSAQNVGIRLQS
HHHHCCCCCCCCEEEEEEECCCCHHHCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEC
ASGEYLDNGVEQKAPTVLQNGTNIARFAAMYEAVAADVKPGTADGVANFTVRYQ
CCCCHHHCCCCHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKTLLTAAALAVLSTSAFAAGANSGTGTINFTGEIVAGACGIDSGSDNQTVNLGKVPTN
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCCCEEEECCCCHH
VFKQAGDKSTATNFDIKLTDCDTSVAQNAFFTFTGTSSAGQPKLFATIGSAQNVGIRLQS
HHHHCCCCCCCCEEEEEEECCCCHHHCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEC
ASGEYLDNGVEQKAPTVLQNGTNIARFAAMYEAVAADVKPGTADGVANFTVRYQ
CCCCHHHCCCCHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8636962; 11251843; 12657207 [H]