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The map label for this gene is yfcU [H]

Identifier: 161524784

GI number: 161524784

Start: 1778969

End: 1781458

Strand: Reverse

Name: yfcU [H]

Synonym: Bmul_1611

Alternate gene names: 161524784

Gene position: 1781458-1778969 (Counterclockwise)

Preceding gene: 161524785

Following gene: 161524783

Centisome position: 51.66

GC content: 67.91

Gene sequence:

>2490_bases
GTGCGAATCAGACATTCCCTCCTTTGCGTCTCCGTGCTGGTCGTCGGCAGCCAGAGCCATGCGACGGAATTCAATTCGTC
GTTTCTCAGCATCGACGGCACGACCGACGTCGACCTGTCGCAGTTCTCGCAGGCCGACTTCACGCTGCCCGGCGAGTACA
TGCTCGAGGTGCAGGTCAACGACCTGTTCTACGGGCTGCAGCCGATCGAGTTCGTCGCGCTCGATGCGTCGGGCGCGGGC
AAGCCCTGCCTGCGCGCGGAGCTCGTCGCGCAGTTCGGCCTGAAGCCGTCGCTCGCGAAAGACCTGCCGCGTTTCCACGG
CGGGCGCTGCGTCGATCTCGCGGCGATCGAGGGCGTGACCGTGCGCTATCTGAAGGGCGACGGCCGGCTCAGGATCACGA
TTCCGCAGGCTGCGCTCGAGTTCACCGACGGTACGTATCTGCCGCCGGAACGCTGGTCGGACGGGATCGCCGGCGCGATG
CTCGACTATCGCGTGATCGCGAACACGAACCGCAGCTTCGGTTCGGGCGGCCGGCAGACGAATGCGGTCCAGGCATACGG
GACGATCGGCGCGAACTGGGGCGCGTGGCGCGTTCGCGGCGACTACCAGGCGCAGTCGAACGTCGGCAATACGGTCTATG
CGGACCGCACGTTCCGTTTCAGCCGCCTCTATGCGTTCCGCGCGCTGCCGTCGATCCAGTCGACCGTCACGTTCGGCGAC
GACTATCTGAGCTCCGACATCTTCGACACGTTCGCGCTGACCGGCGCGTCGATCCGCAGCGACGACCGGATGCTGCCGCC
GTCGCTGCGCGGCTATGCGCCGCTGATTTCCGGCGTCGCGCGCACCAACGCGACCGTGACCGTGTCGCAGCAGGGGCGTG
TGCTGTACGTGACGCGCGTGTCGCCCGGGGCGTTCGCGCTGCAGAACATCAATACGAGCGTGCAGGGCACGCTCGACGTC
GCGGTCGAGGAAGAGGACGGCAGCGTGCAGCGCTTCCAGGTGACGACCGCGGCCGTGCCGTTCCTCGCGCGCACGGGGCA
GTTCCGCTACAAGGCCGCGGTCGGCAAGCCGCGGCGCTTCGGCGGTGCGGGCATCACGCCGTTCTTCGGCTTCGGCGAGG
CGGCGTACGGGCTGCCGTTCGACGTCACCGTGTACGGCGGCTTCATCGCCGCGTCCGGCTATACGTCGATCGCGCTCGGC
GTCGGCCGCGACTTCGGCACGTTCGGTGCGGTGTCGGCCGACGTCACGCATGCACGCGCCCGGCTCTGGTGGAACGGCGC
GACGCGTCACGGCAACTCGTACCGCATCAACTATTCGAAGCATTTCGACGGGCTCGACGCGGACGTGCGCTTCTTCGGCT
ATCGCTTTTCCGAACGCGACTACACGAATTTCGCGCAGTTCTCCGGCGACCCGACCGCATACGGCCTCGCGAACAGCAAG
CAACGCTACTCGGCGACGATGTCGAAGCGCTTCGGCGATACGTCGGCCTATTTCTCGTACGACCAGACGACGTACTGGGA
ACGCGCGTCCGAGCAGCGCGTCGGCGTGACGCTGACGCGCGCCTTCTCGGTCGGCGCGCTGCGCAACCTGAACGTCAGCG
TGTCGGCGTTTCGCACGCAGAGCGCGGGCGCGAGCGGCAACCAGGTGTCGGTGACGGCGACGCTGCCGATCGGCGGCCGC
CATACCGTCACGTCGAACCTGACGACCGGCAACGGCAGCACGAGCGTCAACGCCGGCTACCTGTACGACGATCCGGCCGG
CCGCACTTATCAGATCAGCGCGGGCACGACCGACGGCCGCGCGTCGGCGAACGCGAGCTTCCGCCAGCGCACGTCCGCGT
ATCAGCTGACCGCGCAGGCGTCGACGGTCGCGAACGGTTACGCGGCCGCATCGCTCGAGGTCGACGGTTCGCTCGTCGCG
ACGCAGTACGGCATTGCCGCGCATGCGAACGGCAATGCGGGCGACACGCGGTTGCTGGTGTCGACCGACGGCGTGCGCGA
CGTGCCGCTGTCCGGCACGCTGACGCACACCGATTCGCGCGGCTACGCGGTGCTCGACGGCATCTCGCCGTACAACGTGT
ACGACGCGGCGGTCAACGTCGAGAAGCTGCCGCTCGAAGTGCAGGTGTCGAACCCGATCCAGCGCATGGTGCTGACCGAC
GGCGCGATCGGCTTCGTGCAGTTTTCGGCCGCACGCGGCAGCAACCTCTATCTGACGTTGACCGATGCGGCCGGCAAGCC
GCTGCCGTTCGGCGCATCGGTGCAGGACGCGGCGAACGGCAAGGAGCTCGGCATCGTCGGCGAGGGCGGCGCCGCGTACC
TGACGCAGGTGCAGCCGAAGTCGTCGCTCGTCGTGCGCGCAGGTGAACGCACGCTCTGCACGATCGACACGCTGCCGAAC
CGCCTGCAACTCGAAGGCACGCCGATTCCGGTCGCGTGCGACATGACGGTCGCGCCGCACGCGGCCGCCCAACCTGAAAC
GATTCACTGA

Upstream 100 bases:

>100_bases
CGCTACCAGTAAGCGCCGGTTCGGGAGGACGCGATGTGCGCATCGTTCCTCCCGCATTGCTCCGATTTCCCTTCGTCCCA
CGACTTTCCCGTAGCGCCGC

Downstream 100 bases:

>100_bases
CGGATGTTGCGATGAAGCACTTTCTTTCCCTTCCCGGCGTGCGCCGCACGTCGTCGCTGCTCGCCGCGGCCGGCGCGCTC
ATCGCCTGCGCCGCGCACGC

Product: fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 829; Mature: 829

Protein sequence:

>829_residues
MRIRHSLLCVSVLVVGSQSHATEFNSSFLSIDGTTDVDLSQFSQADFTLPGEYMLEVQVNDLFYGLQPIEFVALDASGAG
KPCLRAELVAQFGLKPSLAKDLPRFHGGRCVDLAAIEGVTVRYLKGDGRLRITIPQAALEFTDGTYLPPERWSDGIAGAM
LDYRVIANTNRSFGSGGRQTNAVQAYGTIGANWGAWRVRGDYQAQSNVGNTVYADRTFRFSRLYAFRALPSIQSTVTFGD
DYLSSDIFDTFALTGASIRSDDRMLPPSLRGYAPLISGVARTNATVTVSQQGRVLYVTRVSPGAFALQNINTSVQGTLDV
AVEEEDGSVQRFQVTTAAVPFLARTGQFRYKAAVGKPRRFGGAGITPFFGFGEAAYGLPFDVTVYGGFIAASGYTSIALG
VGRDFGTFGAVSADVTHARARLWWNGATRHGNSYRINYSKHFDGLDADVRFFGYRFSERDYTNFAQFSGDPTAYGLANSK
QRYSATMSKRFGDTSAYFSYDQTTYWERASEQRVGVTLTRAFSVGALRNLNVSVSAFRTQSAGASGNQVSVTATLPIGGR
HTVTSNLTTGNGSTSVNAGYLYDDPAGRTYQISAGTTDGRASANASFRQRTSAYQLTAQASTVANGYAAASLEVDGSLVA
TQYGIAAHANGNAGDTRLLVSTDGVRDVPLSGTLTHTDSRGYAVLDGISPYNVYDAAVNVEKLPLEVQVSNPIQRMVLTD
GAIGFVQFSAARGSNLYLTLTDAAGKPLPFGASVQDAANGKELGIVGEGGAAYLTQVQPKSSLVVRAGERTLCTIDTLPN
RLQLEGTPIPVACDMTVAPHAAAQPETIH

Sequences:

>Translated_829_residues
MRIRHSLLCVSVLVVGSQSHATEFNSSFLSIDGTTDVDLSQFSQADFTLPGEYMLEVQVNDLFYGLQPIEFVALDASGAG
KPCLRAELVAQFGLKPSLAKDLPRFHGGRCVDLAAIEGVTVRYLKGDGRLRITIPQAALEFTDGTYLPPERWSDGIAGAM
LDYRVIANTNRSFGSGGRQTNAVQAYGTIGANWGAWRVRGDYQAQSNVGNTVYADRTFRFSRLYAFRALPSIQSTVTFGD
DYLSSDIFDTFALTGASIRSDDRMLPPSLRGYAPLISGVARTNATVTVSQQGRVLYVTRVSPGAFALQNINTSVQGTLDV
AVEEEDGSVQRFQVTTAAVPFLARTGQFRYKAAVGKPRRFGGAGITPFFGFGEAAYGLPFDVTVYGGFIAASGYTSIALG
VGRDFGTFGAVSADVTHARARLWWNGATRHGNSYRINYSKHFDGLDADVRFFGYRFSERDYTNFAQFSGDPTAYGLANSK
QRYSATMSKRFGDTSAYFSYDQTTYWERASEQRVGVTLTRAFSVGALRNLNVSVSAFRTQSAGASGNQVSVTATLPIGGR
HTVTSNLTTGNGSTSVNAGYLYDDPAGRTYQISAGTTDGRASANASFRQRTSAYQLTAQASTVANGYAAASLEVDGSLVA
TQYGIAAHANGNAGDTRLLVSTDGVRDVPLSGTLTHTDSRGYAVLDGISPYNVYDAAVNVEKLPLEVQVSNPIQRMVLTD
GAIGFVQFSAARGSNLYLTLTDAAGKPLPFGASVQDAANGKELGIVGEGGAAYLTQVQPKSSLVVRAGERTLCTIDTLPN
RLQLEGTPIPVACDMTVAPHAAAQPETIH
>Mature_829_residues
MRIRHSLLCVSVLVVGSQSHATEFNSSFLSIDGTTDVDLSQFSQADFTLPGEYMLEVQVNDLFYGLQPIEFVALDASGAG
KPCLRAELVAQFGLKPSLAKDLPRFHGGRCVDLAAIEGVTVRYLKGDGRLRITIPQAALEFTDGTYLPPERWSDGIAGAM
LDYRVIANTNRSFGSGGRQTNAVQAYGTIGANWGAWRVRGDYQAQSNVGNTVYADRTFRFSRLYAFRALPSIQSTVTFGD
DYLSSDIFDTFALTGASIRSDDRMLPPSLRGYAPLISGVARTNATVTVSQQGRVLYVTRVSPGAFALQNINTSVQGTLDV
AVEEEDGSVQRFQVTTAAVPFLARTGQFRYKAAVGKPRRFGGAGITPFFGFGEAAYGLPFDVTVYGGFIAASGYTSIALG
VGRDFGTFGAVSADVTHARARLWWNGATRHGNSYRINYSKHFDGLDADVRFFGYRFSERDYTNFAQFSGDPTAYGLANSK
QRYSATMSKRFGDTSAYFSYDQTTYWERASEQRVGVTLTRAFSVGALRNLNVSVSAFRTQSAGASGNQVSVTATLPIGGR
HTVTSNLTTGNGSTSVNAGYLYDDPAGRTYQISAGTTDGRASANASFRQRTSAYQLTAQASTVANGYAAASLEVDGSLVA
TQYGIAAHANGNAGDTRLLVSTDGVRDVPLSGTLTHTDSRGYAVLDGISPYNVYDAAVNVEKLPLEVQVSNPIQRMVLTD
GAIGFVQFSAARGSNLYLTLTDAAGKPLPFGASVQDAANGKELGIVGEGGAAYLTQVQPKSSLVVRAGERTLCTIDTLPN
RLQLEGTPIPVACDMTVAPHAAAQPETIH

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=821, Percent_Identity=34.3483556638246, Blast_Score=426, Evalue=1e-120,
Organism=Escherichia coli, GI1786744, Length=852, Percent_Identity=29.81220657277, Blast_Score=290, Evalue=4e-79,
Organism=Escherichia coli, GI1790772, Length=819, Percent_Identity=29.4261294261294, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1787172, Length=842, Percent_Identity=27.9097387173397, Blast_Score=268, Evalue=1e-72,
Organism=Escherichia coli, GI1786332, Length=825, Percent_Identity=27.3939393939394, Blast_Score=259, Evalue=6e-70,
Organism=Escherichia coli, GI1789533, Length=843, Percent_Identity=28.1138790035587, Blast_Score=239, Evalue=7e-64,
Organism=Escherichia coli, GI1788427, Length=837, Percent_Identity=25.8064516129032, Blast_Score=203, Evalue=3e-53,
Organism=Escherichia coli, GI1789610, Length=795, Percent_Identity=23.5220125786164, Blast_Score=90, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 88589; Mature: 88589

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRHSLLCVSVLVVGSQSHATEFNSSFLSIDGTTDVDLSQFSQADFTLPGEYMLEVQVN
CCCHHHHHEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCEEEEEEEE
DLFYGLQPIEFVALDASGAGKPCLRAELVAQFGLKPSLAKDLPRFHGGRCVDLAAIEGVT
EEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCEE
VRYLKGDGRLRITIPQAALEFTDGTYLPPERWSDGIAGAMLDYRVIANTNRSFGSGGRQT
EEEEECCCEEEEEECHHEEEECCCCCCCHHHCCCCCCHHEEEEEEEECCCCCCCCCCCCC
NAVQAYGTIGANWGAWRVRGDYQAQSNVGNTVYADRTFRFSRLYAFRALPSIQSTVTFGD
CEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCCEEHHHHHHHHCCCCCHHEEEECC
DYLSSDIFDTFALTGASIRSDDRMLPPSLRGYAPLISGVARTNATVTVSQQGRVLYVTRV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEE
SPGAFALQNINTSVQGTLDVAVEEEDGSVQRFQVTTAAVPFLARTGQFRYKAAVGKPRRF
CCCEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEHHHHHHHHCCCCEEEEEECCCCCCC
GGAGITPFFGFGEAAYGLPFDVTVYGGFIAASGYTSIALGVGRDFGTFGAVSADVTHARA
CCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCCCCCCCCEECCCEEEEE
RLWWNGATRHGNSYRINYSKHFDGLDADVRFFGYRFSERDYTNFAQFSGDPTAYGLANSK
EEEECCCCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCEECCCCCC
QRYSATMSKRFGDTSAYFSYDQTTYWERASEQRVGVTLTRAFSVGALRNLNVSVSAFRTQ
HHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCEEEEEEEECCCEEECCEEEEEEEEC
SAGASGNQVSVTATLPIGGRHTVTSNLTTGNGSTSVNAGYLYDDPAGRTYQISAGTTDGR
CCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEEECCEEEECCCCCEEEEECCCCCCC
ASANASFRQRTSAYQLTAQASTVANGYAAASLEVDGSLVATQYGIAAHANGNAGDTRLLV
CCCCCHHHHCCCEEEEEECHHHHCCCEEEEEEEECCEEEEEEECEEEECCCCCCCEEEEE
STDGVRDVPLSGTLTHTDSRGYAVLDGISPYNVYDAAVNVEKLPLEVQVSNPIQRMVLTD
ECCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEC
GAIGFVQFSAARGSNLYLTLTDAAGKPLPFGASVQDAANGKELGIVGEGGAAYLTQVQPK
CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHCCCCCEEEEEECCCCEEEEEECCC
SSLVVRAGERTLCTIDTLPNRLQLEGTPIPVACDMTVAPHAAAQPETIH
CCEEEEECCCEEEEEECCCCEEEECCCCCCEEECCEECCCCCCCCCCCC
>Mature Secondary Structure
MRIRHSLLCVSVLVVGSQSHATEFNSSFLSIDGTTDVDLSQFSQADFTLPGEYMLEVQVN
CCCHHHHHEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCEEEEEEEE
DLFYGLQPIEFVALDASGAGKPCLRAELVAQFGLKPSLAKDLPRFHGGRCVDLAAIEGVT
EEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCEE
VRYLKGDGRLRITIPQAALEFTDGTYLPPERWSDGIAGAMLDYRVIANTNRSFGSGGRQT
EEEEECCCEEEEEECHHEEEECCCCCCCHHHCCCCCCHHEEEEEEEECCCCCCCCCCCCC
NAVQAYGTIGANWGAWRVRGDYQAQSNVGNTVYADRTFRFSRLYAFRALPSIQSTVTFGD
CEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCCEEHHHHHHHHCCCCCHHEEEECC
DYLSSDIFDTFALTGASIRSDDRMLPPSLRGYAPLISGVARTNATVTVSQQGRVLYVTRV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEE
SPGAFALQNINTSVQGTLDVAVEEEDGSVQRFQVTTAAVPFLARTGQFRYKAAVGKPRRF
CCCEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEHHHHHHHHCCCCEEEEEECCCCCCC
GGAGITPFFGFGEAAYGLPFDVTVYGGFIAASGYTSIALGVGRDFGTFGAVSADVTHARA
CCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCCCCCCCCEECCCEEEEE
RLWWNGATRHGNSYRINYSKHFDGLDADVRFFGYRFSERDYTNFAQFSGDPTAYGLANSK
EEEECCCCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCEECCCCCC
QRYSATMSKRFGDTSAYFSYDQTTYWERASEQRVGVTLTRAFSVGALRNLNVSVSAFRTQ
HHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCEEEEEEEECCCEEECCEEEEEEEEC
SAGASGNQVSVTATLPIGGRHTVTSNLTTGNGSTSVNAGYLYDDPAGRTYQISAGTTDGR
CCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEEECCEEEECCCCCEEEEECCCCCCC
ASANASFRQRTSAYQLTAQASTVANGYAAASLEVDGSLVATQYGIAAHANGNAGDTRLLV
CCCCCHHHHCCCEEEEEECHHHHCCCEEEEEEEECCEEEEEEECEEEECCCCCCCEEEEE
STDGVRDVPLSGTLTHTDSRGYAVLDGISPYNVYDAAVNVEKLPLEVQVSNPIQRMVLTD
ECCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEC
GAIGFVQFSAARGSNLYLTLTDAAGKPLPFGASVQDAANGKELGIVGEGGAAYLTQVQPK
CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHCCCCCEEEEEECCCCEEEEEECCC
SSLVVRAGERTLCTIDTLPNRLQLEGTPIPVACDMTVAPHAAAQPETIH
CCEEEEECCCEEEEEECCCCEEEECCCCCCEEECCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]