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The map label for this gene is nifU [H]

Identifier: 161524320

GI number: 161524320

Start: 1262779

End: 1263186

Strand: Direct

Name: nifU [H]

Synonym: Bmul_1145

Alternate gene names: 161524320

Gene position: 1262779-1263186 (Clockwise)

Preceding gene: 161524319

Following gene: 161524321

Centisome position: 36.62

GC content: 62.25

Gene sequence:

>408_bases
ATGTCTTACAGCAACAAGGTTCTGGATCACTACGAAAACCCGCGCAACGTCGGTTCGTTCGCGAAGGACGACGACGCGGT
CGGCACGGGCATGGTCGGCGCGCCGGCCTGCGGCGACGTGATGAAGCTGCAGATTCGCGTCGGCGCGGACGGCGTGATCG
AAGACGCGAAGTTCAAGACCTACGGCTGCGGTTCCGCGATCGCATCGAGCTCGCTCGTCACCGAATGGGTGAAGGGCAAG
ACGCTCGACGAAGCGCTCGCGATCAAGAACACGCAAATCGCCGAAGAACTCGCGCTGCCGCCGGTGAAGATTCACTGCTC
GATCCTCGCGGAAGACGCGATCAAGGCAGCCGTGGCCGACTACAAGAAACGCCACGACACGAAGCAGGACGATCAGGCAG
CGGCCTGA

Upstream 100 bases:

>100_bases
CTGTCGACGATCGAATGGGCCGCACACTGAGCACCGCATATCGAACATACCCGCGGGCGGATTCGCGCACGCAGACGTAA
CGAGTCAAGGAGTCTGAGTC

Downstream 100 bases:

>100_bases
CGCATCGAGCGGCTTGTGAAGGGAATCGCGGCGTGCCGACGGCGCGCCGCGGCAAGGACATCATGGCAATTACACTGACC
GAAAAAGCAGCACAGCACGT

Product: scaffold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGVIEDAKFKTYGCGSAIASSSLVTEWVKGK
TLDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKKRHDTKQDDQAAA

Sequences:

>Translated_135_residues
MSYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGVIEDAKFKTYGCGSAIASSSLVTEWVKGK
TLDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKKRHDTKQDDQAAA
>Mature_134_residues
SYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGVIEDAKFKTYGCGSAIASSSLVTEWVKGKT
LDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKKRHDTKQDDQAAA

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=129, Percent_Identity=72.0930232558139, Blast_Score=197, Evalue=2e-51,
Organism=Homo sapiens, GI24307953, Length=127, Percent_Identity=72.4409448818898, Blast_Score=194, Evalue=2e-50,
Organism=Escherichia coli, GI1788878, Length=128, Percent_Identity=80.46875, Blast_Score=220, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17543474, Length=126, Percent_Identity=69.8412698412698, Blast_Score=189, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6325122, Length=126, Percent_Identity=68.2539682539683, Blast_Score=182, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6324800, Length=125, Percent_Identity=68, Blast_Score=179, Evalue=1e-46,
Organism=Drosophila melanogaster, GI21355597, Length=126, Percent_Identity=72.2222222222222, Blast_Score=192, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011339
- InterPro:   IPR002871 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 14354; Mature: 14223

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGVIEDAKFKT
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
YGCGSAIASSSLVTEWVKGKTLDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVAD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
YKKRHDTKQDDQAAA
HHHHCCCCCCCCCCC
>Mature Secondary Structure 
SYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGADGVIEDAKFKT
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
YGCGSAIASSSLVTEWVKGKTLDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVAD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
YKKRHDTKQDDQAAA
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]