Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 161523489

GI number: 161523489

Start: 341640

End: 342932

Strand: Reverse

Name: dadA [H]

Synonym: Bmul_0309

Alternate gene names: 161523489

Gene position: 342932-341640 (Counterclockwise)

Preceding gene: 161523490

Following gene: 161523483

Centisome position: 9.94

GC content: 71.15

Gene sequence:

>1293_bases
ATGCATGTGATCGTCCTCGGCGCCGGCGTGATCGGCGTCGCTACCGCGTGGCACCTGCGCGAAGCGGGCTGCGACGTCAC
CGTGATCGAACGCGAGGCCGACGTCGCTCAGGCGACGAGCTTCGGCAACGCGGGCGTGATCGCGCCCGGCTACGTGACGC
CGTGGGCCGCGCCCGGGATGCCGGGCAAGCTCGTCAAATACCTGTTTCGGCCCGCGTCGCCGCTGATCTTCCGCCCGACG
CTCGATCCCGCGCAATGGCGCTGGATCGCACGCTGGCTGCGCGAATGCGAATTCGAACGGTTCCGCGCGAACAAGCAGCG
GATGCAGCGCATCGCGTATTACAGCCGCGCGTGCCTCCATGCGTTTCGCGAACGGCATCCGTTCGACTACGGCGCGAGCC
GCGGCTATCTGCAGCTGCTGCGCAGCGCATTCGACGTCGACATGGTGCAGCCCGCGCTGAACGTGCTGCGCGATGCCGGC
ATCGCGTTTCACGAGCTCGACGCGGCCGGCTGCATCGCGGTCGAACCGGGGCTGCGCTGGGCGCGGCAGGCGCCCGTCGG
CGGCATCCATCTGCCCGACGACGAAGCCGGCGACTGCGCGCGCTTCACGCGCGAACTGCGGGCGCTCTGCGAAGCGAACG
GCGTGGCGTTTCGCTTCGGCACCGACGTGCGTGCGCTCGACGTCGCCGGCCGGCGTGCGCGCGGCGTGTGCATCGCGCCG
GCCGGTCCGCACGGCGGCAACGGCGACGCCCGCGGCGATGCGATGCTCGCCGCCGATGCGATCGTCGTCGCGCTCGGCGT
CGACAGTGCCGATCTGCTCGACCGGTACGGCATCGACGTGCCGCTGTATCCCGTGAAGGGCTATTCGGCGACGCTCTCCG
TCGTCGACGACGAACGCGCGCCGCGGGCTGCGCTGATGGACGAGTCGCTCAAGACGGCGATCACGCGTTTCGGCCCGACG
CTGCGCGTGGCCGGCACCGCGGAACTCGGCAACCGGCGCGCGGCACTGCGGCAGCGCGCGCTCGACACGCTGATGACCGT
GCTCGACGACTGGTTTCCGCATGCGGCGGACCGCTCGTCGGTACGCTTCTGGGCCGGCCGCCGGCCGATGACGCCCGACG
GGCCGCCGCTGCTCGGCGCGAGCGGAATCGACGGTCTCTGGCTGAACGTCGGCCACGGTTCGACCGGCTGGGCGATGTCG
ATGGGATCGGGCAAGGTGCTCGCGGATCTCGTGACCGGCCGCGAACCCGAGATCGATCTGTCCGGCCTGACGCTCGCGCG
CTACGCGCGTTAG

Upstream 100 bases:

>100_bases
GTGATCGTCGCCGCGCTCGTGCTGCCGGAAACGCGCGGCAAGTCGCTGGCCGACGATCCGGCCGTCGCATCGTGAACCGC
CGTTTCGCTCCGGGTACCGC

Downstream 100 bases:

>100_bases
GTCCGCTCGCCGGGCACGCGGTGCTCGAGGCAGGCGATCGGCGCCGACACGATCGGCCGATGCGATACGCCTTCGTGCGA
CAGCCGGCTTTCGAACAGCG

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MHVIVLGAGVIGVATAWHLREAGCDVTVIEREADVAQATSFGNAGVIAPGYVTPWAAPGMPGKLVKYLFRPASPLIFRPT
LDPAQWRWIARWLRECEFERFRANKQRMQRIAYYSRACLHAFRERHPFDYGASRGYLQLLRSAFDVDMVQPALNVLRDAG
IAFHELDAAGCIAVEPGLRWARQAPVGGIHLPDDEAGDCARFTRELRALCEANGVAFRFGTDVRALDVAGRRARGVCIAP
AGPHGGNGDARGDAMLAADAIVVALGVDSADLLDRYGIDVPLYPVKGYSATLSVVDDERAPRAALMDESLKTAITRFGPT
LRVAGTAELGNRRAALRQRALDTLMTVLDDWFPHAADRSSVRFWAGRRPMTPDGPPLLGASGIDGLWLNVGHGSTGWAMS
MGSGKVLADLVTGREPEIDLSGLTLARYAR

Sequences:

>Translated_430_residues
MHVIVLGAGVIGVATAWHLREAGCDVTVIEREADVAQATSFGNAGVIAPGYVTPWAAPGMPGKLVKYLFRPASPLIFRPT
LDPAQWRWIARWLRECEFERFRANKQRMQRIAYYSRACLHAFRERHPFDYGASRGYLQLLRSAFDVDMVQPALNVLRDAG
IAFHELDAAGCIAVEPGLRWARQAPVGGIHLPDDEAGDCARFTRELRALCEANGVAFRFGTDVRALDVAGRRARGVCIAP
AGPHGGNGDARGDAMLAADAIVVALGVDSADLLDRYGIDVPLYPVKGYSATLSVVDDERAPRAALMDESLKTAITRFGPT
LRVAGTAELGNRRAALRQRALDTLMTVLDDWFPHAADRSSVRFWAGRRPMTPDGPPLLGASGIDGLWLNVGHGSTGWAMS
MGSGKVLADLVTGREPEIDLSGLTLARYAR
>Mature_430_residues
MHVIVLGAGVIGVATAWHLREAGCDVTVIEREADVAQATSFGNAGVIAPGYVTPWAAPGMPGKLVKYLFRPASPLIFRPT
LDPAQWRWIARWLRECEFERFRANKQRMQRIAYYSRACLHAFRERHPFDYGASRGYLQLLRSAFDVDMVQPALNVLRDAG
IAFHELDAAGCIAVEPGLRWARQAPVGGIHLPDDEAGDCARFTRELRALCEANGVAFRFGTDVRALDVAGRRARGVCIAP
AGPHGGNGDARGDAMLAADAIVVALGVDSADLLDRYGIDVPLYPVKGYSATLSVVDDERAPRAALMDESLKTAITRFGPT
LRVAGTAELGNRRAALRQRALDTLMTVLDDWFPHAADRSSVRFWAGRRPMTPDGPPLLGASGIDGLWLNVGHGSTGWAMS
MGSGKVLADLVTGREPEIDLSGLTLARYAR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=431, Percent_Identity=41.7633410672854, Blast_Score=337, Evalue=1e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46581; Mature: 46581

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVIVLGAGVIGVATAWHLREAGCDVTVIEREADVAQATSFGNAGVIAPGYVTPWAAPGM
CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCEECCCCCCCCCCCCC
PGKLVKYLFRPASPLIFRPTLDPAQWRWIARWLRECEFERFRANKQRMQRIAYYSRACLH
CHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFRERHPFDYGASRGYLQLLRSAFDVDMVQPALNVLRDAGIAFHELDAAGCIAVEPGLRW
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHH
ARQAPVGGIHLPDDEAGDCARFTRELRALCEANGVAFRFGTDVRALDVAGRRARGVCIAP
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCEEEEC
AGPHGGNGDARGDAMLAADAIVVALGVDSADLLDRYGIDVPLYPVKGYSATLSVVDDERA
CCCCCCCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCCCCEEECCCCCEEEEEECCCCC
PRAALMDESLKTAITRFGPTLRVAGTAELGNRRAALRQRALDTLMTVLDDWFPHAADRSS
CHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VRFWAGRRPMTPDGPPLLGASGIDGLWLNVGHGSTGWAMSMGSGKVLADLVTGREPEIDL
EEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHHCCCCCCCCC
SGLTLARYAR
CCCCHHHHCC
>Mature Secondary Structure
MHVIVLGAGVIGVATAWHLREAGCDVTVIEREADVAQATSFGNAGVIAPGYVTPWAAPGM
CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCEECCCCCCCCCCCCC
PGKLVKYLFRPASPLIFRPTLDPAQWRWIARWLRECEFERFRANKQRMQRIAYYSRACLH
CHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFRERHPFDYGASRGYLQLLRSAFDVDMVQPALNVLRDAGIAFHELDAAGCIAVEPGLRW
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHH
ARQAPVGGIHLPDDEAGDCARFTRELRALCEANGVAFRFGTDVRALDVAGRRARGVCIAP
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCEEEEC
AGPHGGNGDARGDAMLAADAIVVALGVDSADLLDRYGIDVPLYPVKGYSATLSVVDDERA
CCCCCCCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCCCCEEECCCCCEEEEEECCCCC
PRAALMDESLKTAITRFGPTLRVAGTAELGNRRAALRQRALDTLMTVLDDWFPHAADRSS
CHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VRFWAGRRPMTPDGPPLLGASGIDGLWLNVGHGSTGWAMSMGSGKVLADLVTGREPEIDL
EEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHHCCCCCCCCC
SGLTLARYAR
CCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]