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The map label for this gene is ompW [H]

Identifier: 161523483

GI number: 161523483

Start: 331078

End: 331809

Strand: Reverse

Name: ompW [H]

Synonym: Bmul_0303

Alternate gene names: 161523483

Gene position: 331809-331078 (Counterclockwise)

Preceding gene: 161523489

Following gene: 161523470

Centisome position: 9.62

GC content: 62.43

Gene sequence:

>732_bases
ATGAAACGAAAACTGGCCATTACGGGGGCCGCGGCGCTCGCATTCGCACTGGCGGGCGGCACGGCACACGCACAATCTGC
AGGTAGTTTTTACGTCAGCACCGGCTGGTTTCACCTGTCCCCGCAGGACAGCAGCGACCCGCTCTTTGTCTATGGCGTCG
GCGGCACGCCCGTCAATCAGTCCGTTCCCAACACCGGTGCGGGCATCAACGATGCCGACACGCTCGGCCTGGCGACCGGC
TACTTCCTCACCGACCACATTTCCACCGAATTCGTCCTCGGTGTGCCGCCGAAGTTCGACATCACCGGAAAAGGTCAGTT
CGCGAACTTCGGCGTGCTCGGCCGCGCGTATCAGTGGAGCCCCGCACTGCTGCTGCGCTACCACTTCAACGACGCGAACG
CGAAATTCCGCCCGTATGTCGGCATCGGCGCGACGTACGTCTGGTTCACCGGCGCGAAGATCACGAACACCGCGTTCGAG
AACGGCGTGCTCGGCGGCCCCACCAGTGCAACGACGAGCAATCAGTGGGCCCCGGTCTTCAACGCAGGCTTCACGTACAA
CTTCACGAAGCACTGGTTCGCCGGCCTGTCGATTTCGTACGTGCCGGTGAGCGTCACCGCGACTTTCACCACCGCTCGCC
GCACGCAGGTCGGCACGCTGACCGAAACCTCGAAAGCCCACATCTCGCTGAATCCGATCGTCACGTACCTGAACGTCGGC
TACCGTTTCTAA

Upstream 100 bases:

>100_bases
ACGGTCGTACTAAACCTAGGGAGAAAACTCTAGCTTACGAGCTTGTTTGGTTTTAAACGCAGTCGTCATAATGAGCACGC
CTTTGATCGGAGGAGACACA

Downstream 100 bases:

>100_bases
GCGTAGTCGAATATTTGGGGAATGGTTAATCCCGCTGCAATTTGTAGCGGAATTTTCCCGCCGTAACGTCTCCGCGATGC
AAAACGCCCCGGCCAAACCG

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKRKLAITGAAALAFALAGGTAHAQSAGSFYVSTGWFHLSPQDSSDPLFVYGVGGTPVNQSVPNTGAGINDADTLGLATG
YFLTDHISTEFVLGVPPKFDITGKGQFANFGVLGRAYQWSPALLLRYHFNDANAKFRPYVGIGATYVWFTGAKITNTAFE
NGVLGGPTSATTSNQWAPVFNAGFTYNFTKHWFAGLSISYVPVSVTATFTTARRTQVGTLTETSKAHISLNPIVTYLNVG
YRF

Sequences:

>Translated_243_residues
MKRKLAITGAAALAFALAGGTAHAQSAGSFYVSTGWFHLSPQDSSDPLFVYGVGGTPVNQSVPNTGAGINDADTLGLATG
YFLTDHISTEFVLGVPPKFDITGKGQFANFGVLGRAYQWSPALLLRYHFNDANAKFRPYVGIGATYVWFTGAKITNTAFE
NGVLGGPTSATTSNQWAPVFNAGFTYNFTKHWFAGLSISYVPVSVTATFTTARRTQVGTLTETSKAHISLNPIVTYLNVG
YRF
>Mature_243_residues
MKRKLAITGAAALAFALAGGTAHAQSAGSFYVSTGWFHLSPQDSSDPLFVYGVGGTPVNQSVPNTGAGINDADTLGLATG
YFLTDHISTEFVLGVPPKFDITGKGQFANFGVLGRAYQWSPALLLRYHFNDANAKFRPYVGIGATYVWFTGAKITNTAFE
NGVLGGPTSATTSNQWAPVFNAGFTYNFTKHWFAGLSISYVPVSVTATFTTARRTQVGTLTETSKAHISLNPIVTYLNVG
YRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=243, Percent_Identity=26.3374485596708, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 25946; Mature: 25946

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKLAITGAAALAFALAGGTAHAQSAGSFYVSTGWFHLSPQDSSDPLFVYGVGGTPVNQ
CCEEEEEEHHHHEEEEECCCCCCCCCCCCEEEEECEEEECCCCCCCCEEEEECCCCCCCC
SVPNTGAGINDADTLGLATGYFLTDHISTEFVLGVPPKFDITGKGQFANFGVLGRAYQWS
CCCCCCCCCCCCCHHEEEECEEEEECCCCEEEEECCCCEEECCCCCEECCEEECCEEECC
PALLLRYHFNDANAKFRPYVGIGATYVWFTGAKITNTAFENGVLGGPTSATTSNQWAPVF
CEEEEEEEECCCCCEECEEEECCEEEEEEECCEEECCHHHCCCCCCCCCCCCCCCCCEEE
NAGFTYNFTKHWFAGLSISYVPVSVTATFTTARRTQVGTLTETSKAHISLNPIVTYLNVG
ECCEEEECHHHHHCCCEEEEEEEEEEEEEEECCCEEECEEECCCCEEEEECEEEEEEECC
YRF
CCC
>Mature Secondary Structure
MKRKLAITGAAALAFALAGGTAHAQSAGSFYVSTGWFHLSPQDSSDPLFVYGVGGTPVNQ
CCEEEEEEHHHHEEEEECCCCCCCCCCCCEEEEECEEEECCCCCCCCEEEEECCCCCCCC
SVPNTGAGINDADTLGLATGYFLTDHISTEFVLGVPPKFDITGKGQFANFGVLGRAYQWS
CCCCCCCCCCCCCHHEEEECEEEEECCCCEEEEECCCCEEECCCCCEECCEEECCEEECC
PALLLRYHFNDANAKFRPYVGIGATYVWFTGAKITNTAFENGVLGGPTSATTSNQWAPVF
CEEEEEEEECCCCCEECEEEECCEEEEEEECCEEECCHHHCCCCCCCCCCCCCCCCCEEE
NAGFTYNFTKHWFAGLSISYVPVSVTATFTTARRTQVGTLTETSKAHISLNPIVTYLNVG
ECCEEEECHHHHHCCCEEEEEEEEEEEEEEECCCEEECEEECCCCEEEEECEEEEEEECC
YRF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]