| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is glnA [H]
Identifier: 16126212
GI number: 16126212
Start: 2166922
End: 2168331
Strand: Direct
Name: glnA [H]
Synonym: CC_1969
Alternate gene names: 16126212
Gene position: 2166922-2168331 (Clockwise)
Preceding gene: 16126211
Following gene: 16126213
Centisome position: 53.94
GC content: 62.77
Gene sequence:
>1410_bases ATGAGCACCGCCAAGGACATCCTGAACCTGATCAAGGAAAAGGACGTGAAGTACGTCGACGTCCGTTTCACGGACGTGCG CGGCAAGATGCAGCACGTGACCTTCGACATCGACCTCGTCGACGACGACTTCCTGAACGACGGCACCATGTTCGACGGTT CGTCGATCGCCGGCTGGAAGGCCATCAACGAGTCGGACATGAAGCTGCGCCCCGACCTGTCGAGCGCGATCATCGACCCG TTCTACCAGCAGACCACGCTGGCGCTGTTCTGCGACGTCGTGAACCCCGACACCGGCACGCCCTACAACCGCGACCCGCG TTCGATCGCCAAGGCCGCGCTGAACTACCTGAAGTCGGCCGGCGTGGGCGACACCGTCTACTTCGGCCCTGAAGCCGAGT TCTTCATCTTCGACGACGTGCGCTGGTCGACCGCCCCGCACGACACCAGCTACTCGTTCGATTCGACCGAACTGCCGGTC AACTCGAACAAGCAGTACGCCGAAGGCAACATGGGCCACCGCCCGGGCCCGAAGGGCGGCTACTTCCCGGTGAACCCGGT CGACAGCTGCCAAGACCTGCGCGGCGAAATGCTGGCCGTCATGGGCGAGCTGGGCATGAAGCCGGAAAAGCACCACCACG AAGTGGCGCCGGCCCAGCACGAGCTTGGCCTGAAGTTCGACACCATGGTCACCATGGCCGACCGGATGCAGCTCTATAAG TACGTCATCCACAACGTCGCGGCCGCCTACGGCAAGACCGCCACCTTCATGGCCAAGCCGATGTTCGCCGACAACGGTTC GGGCATGCACGTGCACCAGTCGATCTGGCAGGACGGCAAGCCGCTGTTCGCCGGCGACAAGTATGCTGGCCTGTCGCAGG AATGCCTGTGGTACATCGGCGGCATCATCAAGCACGCCAAGGCCATCAACGCGTTCTCGAACTCGACGACGAACTCGTAC AAGCGCCTGGTGCCCGGCTACGAAGCCCCGGTGAAGCTGGCCTACAGCTCGCGCAACCGCTCGGCCTCGATCCGCATCCC GCACGTCGACTCGCCGAAGGCTAAGCGTCTGGAAGCCCGCTTCCCCGACCCGATGGGCAACCCCTACCTGACGTTCGTCG CTCTGCTGATGGCCGGCCTGGACGGCATCATCAACAAGATCGATCCGGGCGCTCCGGCCGACAAGAACCTGTACGATCTG CCGCCCCGCGAGCAGAAGAAGATCCCGGAAGTCTGCGGCTCGCTGCGCGAAGCCCTGGAAAACCTCGACAAGGACCGCGC CTTCCTGAAGGCCGGCGGTGTCATGGATGACGACTTCATCGACAGCTACATCGAGCTGAAGATGGAAGAGGTGATGCGCC TGCAACTGCACCCGCACCCGGTCGAATTCGAGATGTACTACAAGTGCTAA
Upstream 100 bases:
>100_bases GAGATCGCGGAAGTGATCCGCATCCGAACCGGAGAAAACGGTCCGGCCGCCGTCTAGGCCGGTTCGTCAGCAACTAAAGA GTTCTACAAGGGGATACGGA
Downstream 100 bases:
>100_bases GCGCTTAAGGCTTAGGACAAACGCCAAGGGGCCGGAGAGCGATCTCCGGCCCCTTTTCATTGCGCCGCGCCAGGACGGCG CTCCAGAAGTAGAACGACTT
Product: glutamine synthetase, class I
Products: NA
Alternate protein names: Glutamate--ammonia ligase I; Glutamine synthetase I; GSI [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSTAKDILNLIKEKDVKYVDVRFTDVRGKMQHVTFDIDLVDDDFLNDGTMFDGSSIAGWKAINESDMKLRPDLSSAIIDP FYQQTTLALFCDVVNPDTGTPYNRDPRSIAKAALNYLKSAGVGDTVYFGPEAEFFIFDDVRWSTAPHDTSYSFDSTELPV NSNKQYAEGNMGHRPGPKGGYFPVNPVDSCQDLRGEMLAVMGELGMKPEKHHHEVAPAQHELGLKFDTMVTMADRMQLYK YVIHNVAAAYGKTATFMAKPMFADNGSGMHVHQSIWQDGKPLFAGDKYAGLSQECLWYIGGIIKHAKAINAFSNSTTNSY KRLVPGYEAPVKLAYSSRNRSASIRIPHVDSPKAKRLEARFPDPMGNPYLTFVALLMAGLDGIINKIDPGAPADKNLYDL PPREQKKIPEVCGSLREALENLDKDRAFLKAGGVMDDDFIDSYIELKMEEVMRLQLHPHPVEFEMYYKC
Sequences:
>Translated_469_residues MSTAKDILNLIKEKDVKYVDVRFTDVRGKMQHVTFDIDLVDDDFLNDGTMFDGSSIAGWKAINESDMKLRPDLSSAIIDP FYQQTTLALFCDVVNPDTGTPYNRDPRSIAKAALNYLKSAGVGDTVYFGPEAEFFIFDDVRWSTAPHDTSYSFDSTELPV NSNKQYAEGNMGHRPGPKGGYFPVNPVDSCQDLRGEMLAVMGELGMKPEKHHHEVAPAQHELGLKFDTMVTMADRMQLYK YVIHNVAAAYGKTATFMAKPMFADNGSGMHVHQSIWQDGKPLFAGDKYAGLSQECLWYIGGIIKHAKAINAFSNSTTNSY KRLVPGYEAPVKLAYSSRNRSASIRIPHVDSPKAKRLEARFPDPMGNPYLTFVALLMAGLDGIINKIDPGAPADKNLYDL PPREQKKIPEVCGSLREALENLDKDRAFLKAGGVMDDDFIDSYIELKMEEVMRLQLHPHPVEFEMYYKC >Mature_468_residues STAKDILNLIKEKDVKYVDVRFTDVRGKMQHVTFDIDLVDDDFLNDGTMFDGSSIAGWKAINESDMKLRPDLSSAIIDPF YQQTTLALFCDVVNPDTGTPYNRDPRSIAKAALNYLKSAGVGDTVYFGPEAEFFIFDDVRWSTAPHDTSYSFDSTELPVN SNKQYAEGNMGHRPGPKGGYFPVNPVDSCQDLRGEMLAVMGELGMKPEKHHHEVAPAQHELGLKFDTMVTMADRMQLYKY VIHNVAAAYGKTATFMAKPMFADNGSGMHVHQSIWQDGKPLFAGDKYAGLSQECLWYIGGIIKHAKAINAFSNSTTNSYK RLVPGYEAPVKLAYSSRNRSASIRIPHVDSPKAKRLEARFPDPMGNPYLTFVALLMAGLDGIINKIDPGAPADKNLYDLP PREQKKIPEVCGSLREALENLDKDRAFLKAGGVMDDDFIDSYIELKMEEVMRLQLHPHPVEFEMYYKC
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=468, Percent_Identity=62.3931623931624, Blast_Score=612, Evalue=1e-176, Organism=Escherichia coli, GI87081870, Length=396, Percent_Identity=23.7373737373737, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 52485; Mature: 52354
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP ; PS00182 GLNA_ADENYLATION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAKDILNLIKEKDVKYVDVRFTDVRGKMQHVTFDIDLVDDDFLNDGTMFDGSSIAGWK CCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEECCCCCCCCC AINESDMKLRPDLSSAIIDPFYQQTTLALFCDVVNPDTGTPYNRDPRSIAKAALNYLKSA CCCCCCCEECCCHHHHHHHHHHHHHEEHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC GVGDTVYFGPEAEFFIFDDVRWSTAPHDTSYSFDSTELPVNSNKQYAEGNMGHRPGPKGG CCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YFPVNPVDSCQDLRGEMLAVMGELGMKPEKHHHEVAPAQHELGLKFDTMVTMADRMQLYK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHH YVIHNVAAAYGKTATFMAKPMFADNGSGMHVHQSIWQDGKPLFAGDKYAGLSQECLWYIG HHHHHHHHHHCCCHHEEECCEECCCCCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHH GIIKHAKAINAFSNSTTNSYKRLVPGYEAPVKLAYSSRNRSASIRIPHVDSPKAKRLEAR HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHCC FPDPMGNPYLTFVALLMAGLDGIINKIDPGAPADKNLYDLPPREQKKIPEVCGSLREALE CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NLDKDRAFLKAGGVMDDDFIDSYIELKMEEVMRLQLHPHPVEFEMYYKC HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure STAKDILNLIKEKDVKYVDVRFTDVRGKMQHVTFDIDLVDDDFLNDGTMFDGSSIAGWK CCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEECCCCCCCCC AINESDMKLRPDLSSAIIDPFYQQTTLALFCDVVNPDTGTPYNRDPRSIAKAALNYLKSA CCCCCCCEECCCHHHHHHHHHHHHHEEHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC GVGDTVYFGPEAEFFIFDDVRWSTAPHDTSYSFDSTELPVNSNKQYAEGNMGHRPGPKGG CCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YFPVNPVDSCQDLRGEMLAVMGELGMKPEKHHHEVAPAQHELGLKFDTMVTMADRMQLYK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHH YVIHNVAAAYGKTATFMAKPMFADNGSGMHVHQSIWQDGKPLFAGDKYAGLSQECLWYIG HHHHHHHHHHCCCHHEEECCEECCCCCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHH GIIKHAKAINAFSNSTTNSYKRLVPGYEAPVKLAYSSRNRSASIRIPHVDSPKAKRLEAR HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHCC FPDPMGNPYLTFVALLMAGLDGIINKIDPGAPADKNLYDLPPREQKKIPEVCGSLREALE CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NLDKDRAFLKAGGVMDDDFIDSYIELKMEEVMRLQLHPHPVEFEMYYKC HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275; 2859270; 2793830 [H]