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The map label for this gene is cirA [C]

Identifier: 16126213

GI number: 16126213

Start: 2168461

End: 2170806

Strand: Direct

Name: cirA [C]

Synonym: CC_1970

Alternate gene names: 16126213

Gene position: 2168461-2170806 (Clockwise)

Preceding gene: 16126212

Following gene: 16126215

Centisome position: 53.98

GC content: 63.94

Gene sequence:

>2346_bases
TTGTCGCAAGTTCGCAACATTGGTGACGCAATCGCCCGGAAGTTCCTGAAAAGACGTGATGCGCGATATCCCTCAGGCGG
AGACTTGGCCTATCGCAGCCCAAACGGAATCGCCGCCAACGCCTGGACCACAACTCAGCGACGCGGCGTCTCGACAGGAT
ATCTCATGCACAGCCTCAATAGCTCTCTTCGCCGCGCCCTGACGCTTTCGTGCGGCGCCGCCGCGCTGGTCACGGCCATG
GCCGCCGCGCCGGCCGCCTTCGCCCAGGACACCAAGGTCGGCGAAGTGATCATCACCGCCCAGAAACGCAGCGAAAACCT
GCAGGACGTTCCGGTCTCGGTGGCCGCCATCAGCGGCGAGCGCCTGCAGTCGACCTTCGCGGCCGGTGACGACATCCTGG
CCCTGTCGGCCAAGGCGCCGGGCCTGTACGCGGAATCCTCGAACGGCCGCGTCGCGCCGCGCTTCTACATCCGTGGCCTG
GGCAACGCCGACTTCGATCTGGCCGCGTCGCAACCCGTTTCGATCATCCAGGACGAAGTCGTTCTGGAGAACGTCGTCCT
GAAGAGCTCGCCGCTGTATGACCTCGACCGCGTGGAAGTGCTGCGCGGCCCGCAAGGCACCCTGTTCGGCCGCAACACCA
CGGCCGGCATCGTGAAGTTCGACACCATCAAGCCGTCGGAAGAAATGAAGGGCCGCGCATCGGCTTCGTACGGCAGCTTC
AACACCTTCACCTTCGACGGCGGCGTCGGCGGCGCTCTGGTCGAGGGCAAGCTTGCGGCGCGGGCGTCGGTTCTGTTCCA
GCATCGCGACGACTGGATCGACAACGGCTTCACCAAGAAGAAGAACGTCATGGGCGGCTTCAACGAGCGCGCCGCCCGCC
TGCAGTTGCTGTTCACCCCGACCGAGAAGCTGGACGCGCTGTTCAACGTTCACGGCCGCGACCTGGACGGCACCGCCGCC
GTCTTCCGCGCCAACGTCCTGACCAAGGGCTCCAACAAGCTCAACGCGAACTACGACCGCGACACCGTCTATTTCGACGC
CGGCGCCAACAATCCGCAGCGCTACAAGGGCTACGGCGCCTCGGCGAACATCGGCTACGACTTCGGCTTCGCCAAGCTGA
CCTCGATCACCGCCTACGAGAACACCCACGGCTTCAGCCGCGGCGACATCGACGGCGGCAATCCCACGGGCCCGGGCTTC
ATCCCATTCCAGTCGGACACCCAGGACGGCATCAAGGATCTGGATCAGTGGACCCAGGAAGTTCGCCTGGCCAGCAACAC
TGACGGCGCGCTGAGCTGGCAAGTCGGCGGCTTCTACTTCGATACGACGTACGCCATCCAGACCAACCCCTTCTTCGCCC
CCGCCACCACGCTGCAACAGAAGAACACCGCTTGGGCCGTCTTCGGTCAGGCGTCGTACAAGGTCAGCGATCAACTCTCC
CTGACCGGCGGCCTGCGCTACACCGACGACGACAAGGACATGAAGGTCCTCTCAGGTCCGAACATGGCGGCGCCGGTTTC
GGTGTCGGACTCGCACCTGAGCTGGGACCTGTCGGCGTTCTATACCGTCAGCGAAGATGTCAGCGTCTACGCCAAGGTCG
CCTCGGGCTTCCGCGGTCCGTCGATCCAAGGTCGCGACATCGCGTTCTTCTCGCCCGCCTCGGCGGCGAAGTCCGAAACC
ATCATGTCGTATGAGCTGGGCCTGAAGAGCGAGCTGTTCGATCGCCGCGTGCGCCTGAACGGCGCGGTGTTCGCCTACTC
GATCGACGATCCGCAGTTCAGCGCGGTCGGCGGCGGCAGCAACTCCAACCGCCTGATCAACGCCAAGAAGGGCGAGGCCT
ATGGCCTGGAGCTGGACAGCGAGTTCGTGGTCACGCCGAACTTCGTCGTTACGGCCGGCTACAGCTACGCTCACACCGAG
ATCAAGGACCGCACCCTGGCCGTGGCCACCTGCGCGGCCTGCACCGTGACGGATCCCAAGACGGCCTCGGGCGCTGCGCT
GGTCGATGGCAACCCCTTCCCGAACGCGCCGAAGTACACCTTCGACTTCACCGCCCGATACGCCTATCCGGTGGCCAGCG
GCGAACTGTTCGCCTTCACCGATTGGAAGGTGCAGGGCTACACTAACCTGTTCCTCTACGAGTCGAAGGAATTCTACTCG
AAGGGTGATTTCGAAGGTGGCCTGAAGCTGGGCTACGCCAACAAGGAAGGCGGCTGGGAAGTCGCGGCCTTCGCTCGCAA
CATCACCAACGAGCACAACATCAAGGGCGCGATCGACTTCAACAACCTGACCGCGTTCGTCAACGAACCGCGTGTCATCG
GCGTCTCGATCGACGCGCGCTTCTAA

Upstream 100 bases:

>100_bases
GGCCGGAGAGCGATCTCCGGCCCCTTTTCATTGCGCCGCGCCAGGACGGCGCTCCAGAAGTAGAACGACTTATTACTTAA
GTGGCGCCGACTGAACAAAA

Downstream 100 bases:

>100_bases
GCCACAAAATCTGGGTAGACTGGGAAAGGCCGCGGAGCGATCCGCGGCCTTTTCTTTTTCCGGCGCTAGTTCCGGCGCTA
GGCCTTCAGGCCGTGGCCGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Protein; Nb-Dependent Receptor; NB Dependent Receptor; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Outer Membrane Receptor Protein; Transporter OMR Family; Receptor -Mostly Fe Transport; NB Dependent Receptor Protein; NB-Dependent Siderophore Receptor; NB-Dependent Siderophore Receptor Protein

Number of amino acids: Translated: 781; Mature: 780

Protein sequence:

>781_residues
MSQVRNIGDAIARKFLKRRDARYPSGGDLAYRSPNGIAANAWTTTQRRGVSTGYLMHSLNSSLRRALTLSCGAAALVTAM
AAAPAAFAQDTKVGEVIITAQKRSENLQDVPVSVAAISGERLQSTFAAGDDILALSAKAPGLYAESSNGRVAPRFYIRGL
GNADFDLAASQPVSIIQDEVVLENVVLKSSPLYDLDRVEVLRGPQGTLFGRNTTAGIVKFDTIKPSEEMKGRASASYGSF
NTFTFDGGVGGALVEGKLAARASVLFQHRDDWIDNGFTKKKNVMGGFNERAARLQLLFTPTEKLDALFNVHGRDLDGTAA
VFRANVLTKGSNKLNANYDRDTVYFDAGANNPQRYKGYGASANIGYDFGFAKLTSITAYENTHGFSRGDIDGGNPTGPGF
IPFQSDTQDGIKDLDQWTQEVRLASNTDGALSWQVGGFYFDTTYAIQTNPFFAPATTLQQKNTAWAVFGQASYKVSDQLS
LTGGLRYTDDDKDMKVLSGPNMAAPVSVSDSHLSWDLSAFYTVSEDVSVYAKVASGFRGPSIQGRDIAFFSPASAAKSET
IMSYELGLKSELFDRRVRLNGAVFAYSIDDPQFSAVGGGSNSNRLINAKKGEAYGLELDSEFVVTPNFVVTAGYSYAHTE
IKDRTLAVATCAACTVTDPKTASGAALVDGNPFPNAPKYTFDFTARYAYPVASGELFAFTDWKVQGYTNLFLYESKEFYS
KGDFEGGLKLGYANKEGGWEVAAFARNITNEHNIKGAIDFNNLTAFVNEPRVIGVSIDARF

Sequences:

>Translated_781_residues
MSQVRNIGDAIARKFLKRRDARYPSGGDLAYRSPNGIAANAWTTTQRRGVSTGYLMHSLNSSLRRALTLSCGAAALVTAM
AAAPAAFAQDTKVGEVIITAQKRSENLQDVPVSVAAISGERLQSTFAAGDDILALSAKAPGLYAESSNGRVAPRFYIRGL
GNADFDLAASQPVSIIQDEVVLENVVLKSSPLYDLDRVEVLRGPQGTLFGRNTTAGIVKFDTIKPSEEMKGRASASYGSF
NTFTFDGGVGGALVEGKLAARASVLFQHRDDWIDNGFTKKKNVMGGFNERAARLQLLFTPTEKLDALFNVHGRDLDGTAA
VFRANVLTKGSNKLNANYDRDTVYFDAGANNPQRYKGYGASANIGYDFGFAKLTSITAYENTHGFSRGDIDGGNPTGPGF
IPFQSDTQDGIKDLDQWTQEVRLASNTDGALSWQVGGFYFDTTYAIQTNPFFAPATTLQQKNTAWAVFGQASYKVSDQLS
LTGGLRYTDDDKDMKVLSGPNMAAPVSVSDSHLSWDLSAFYTVSEDVSVYAKVASGFRGPSIQGRDIAFFSPASAAKSET
IMSYELGLKSELFDRRVRLNGAVFAYSIDDPQFSAVGGGSNSNRLINAKKGEAYGLELDSEFVVTPNFVVTAGYSYAHTE
IKDRTLAVATCAACTVTDPKTASGAALVDGNPFPNAPKYTFDFTARYAYPVASGELFAFTDWKVQGYTNLFLYESKEFYS
KGDFEGGLKLGYANKEGGWEVAAFARNITNEHNIKGAIDFNNLTAFVNEPRVIGVSIDARF
>Mature_780_residues
SQVRNIGDAIARKFLKRRDARYPSGGDLAYRSPNGIAANAWTTTQRRGVSTGYLMHSLNSSLRRALTLSCGAAALVTAMA
AAPAAFAQDTKVGEVIITAQKRSENLQDVPVSVAAISGERLQSTFAAGDDILALSAKAPGLYAESSNGRVAPRFYIRGLG
NADFDLAASQPVSIIQDEVVLENVVLKSSPLYDLDRVEVLRGPQGTLFGRNTTAGIVKFDTIKPSEEMKGRASASYGSFN
TFTFDGGVGGALVEGKLAARASVLFQHRDDWIDNGFTKKKNVMGGFNERAARLQLLFTPTEKLDALFNVHGRDLDGTAAV
FRANVLTKGSNKLNANYDRDTVYFDAGANNPQRYKGYGASANIGYDFGFAKLTSITAYENTHGFSRGDIDGGNPTGPGFI
PFQSDTQDGIKDLDQWTQEVRLASNTDGALSWQVGGFYFDTTYAIQTNPFFAPATTLQQKNTAWAVFGQASYKVSDQLSL
TGGLRYTDDDKDMKVLSGPNMAAPVSVSDSHLSWDLSAFYTVSEDVSVYAKVASGFRGPSIQGRDIAFFSPASAAKSETI
MSYELGLKSELFDRRVRLNGAVFAYSIDDPQFSAVGGGSNSNRLINAKKGEAYGLELDSEFVVTPNFVVTAGYSYAHTEI
KDRTLAVATCAACTVTDPKTASGAALVDGNPFPNAPKYTFDFTARYAYPVASGELFAFTDWKVQGYTNLFLYESKEFYSK
GDFEGGLKLGYANKEGGWEVAAFARNITNEHNIKGAIDFNNLTAFVNEPRVIGVSIDARF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84323; Mature: 84191

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVRNIGDAIARKFLKRRDARYPSGGDLAYRSPNGIAANAWTTTQRRGVSTGYLMHSLN
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCEECHHHCCCCHHHHHHHHH
SSLRRALTLSCGAAALVTAMAAAPAAFAQDTKVGEVIITAQKRSENLQDVPVSVAAISGE
HHHHHHEEECCCHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCH
RLQSTFAAGDDILALSAKAPGLYAESSNGRVAPRFYIRGLGNADFDLAASQPVSIIQDEV
HHHHHHCCCCCEEEEECCCCCEEEECCCCEECEEEEEEECCCCCCCCCCCCCHHHHHHHH
VLENVVLKSSPLYDLDRVEVLRGPQGTLFGRNTTAGIVKFDTIKPSEEMKGRASASYGSF
HHHHHHCCCCCCCCCCHHHEEECCCCCEEECCCCCCEEEEECCCCHHHHCCCCCCCCCCC
NTFTFDGGVGGALVEGKLAARASVLFQHRDDWIDNGFTKKKNVMGGFNERAARLQLLFTP
EEEEECCCCCCEEECCHHHHHHHHHHHHCCCHHCCCCCCCHHHCCCCCCCCEEEEEEECC
TEKLDALFNVHGRDLDGTAAVFRANVLTKGSNKLNANYDRDTVYFDAGANNPQRYKGYGA
HHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHCCCCC
SANIGYDFGFAKLTSITAYENTHGFSRGDIDGGNPTGPGFIPFQSDTQDGIKDLDQWTQE
CCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHH
VRLASNTDGALSWQVGGFYFDTTYAIQTNPFFAPATTLQQKNTAWAVFGQASYKVSDQLS
HEEECCCCCEEEEEECCEEEEEEEEEECCCCCCCCHHHCCCCCEEEEEECCEEEECCEEE
LTGGLRYTDDDKDMKVLSGPNMAAPVSVSDSHLSWDLSAFYTVSEDVSVYAKVASGFRGP
EECCCEECCCCCCEEEECCCCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCC
SIQGRDIAFFSPASAAKSETIMSYELGLKSELFDRRVRLNGAVFAYSIDDPQFSAVGGGS
CCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHEEECCEEEEEECCCCCEEEECCCC
NSNRLINAKKGEAYGLELDSEFVVTPNFVVTAGYSYAHTEIKDRTLAVATCAACTVTDPK
CCCEEEEECCCCEEEEEECCCEEECCCEEEEECCCEEECCCCCCEEEEEEEEEEEECCCC
TASGAALVDGNPFPNAPKYTFDFTARYAYPVASGELFAFTDWKVQGYTNLFLYESKEFYS
CCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEECCEEEEEEEECHHHCC
KGDFEGGLKLGYANKEGGWEVAAFARNITNEHNIKGAIDFNNLTAFVNEPRVIGVSIDAR
CCCCCCCEEEEECCCCCCEEHHHHHHHCCCCCCCEEEEEECCEEEEECCCEEEEEEEECC
F
C
>Mature Secondary Structure 
SQVRNIGDAIARKFLKRRDARYPSGGDLAYRSPNGIAANAWTTTQRRGVSTGYLMHSLN
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCEECHHHCCCCHHHHHHHHH
SSLRRALTLSCGAAALVTAMAAAPAAFAQDTKVGEVIITAQKRSENLQDVPVSVAAISGE
HHHHHHEEECCCHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCH
RLQSTFAAGDDILALSAKAPGLYAESSNGRVAPRFYIRGLGNADFDLAASQPVSIIQDEV
HHHHHHCCCCCEEEEECCCCCEEEECCCCEECEEEEEEECCCCCCCCCCCCCHHHHHHHH
VLENVVLKSSPLYDLDRVEVLRGPQGTLFGRNTTAGIVKFDTIKPSEEMKGRASASYGSF
HHHHHHCCCCCCCCCCHHHEEECCCCCEEECCCCCCEEEEECCCCHHHHCCCCCCCCCCC
NTFTFDGGVGGALVEGKLAARASVLFQHRDDWIDNGFTKKKNVMGGFNERAARLQLLFTP
EEEEECCCCCCEEECCHHHHHHHHHHHHCCCHHCCCCCCCHHHCCCCCCCCEEEEEEECC
TEKLDALFNVHGRDLDGTAAVFRANVLTKGSNKLNANYDRDTVYFDAGANNPQRYKGYGA
HHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHCCCCC
SANIGYDFGFAKLTSITAYENTHGFSRGDIDGGNPTGPGFIPFQSDTQDGIKDLDQWTQE
CCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHH
VRLASNTDGALSWQVGGFYFDTTYAIQTNPFFAPATTLQQKNTAWAVFGQASYKVSDQLS
HEEECCCCCEEEEEECCEEEEEEEEEECCCCCCCCHHHCCCCCEEEEEECCEEEECCEEE
LTGGLRYTDDDKDMKVLSGPNMAAPVSVSDSHLSWDLSAFYTVSEDVSVYAKVASGFRGP
EECCCEECCCCCCEEEECCCCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCC
SIQGRDIAFFSPASAAKSETIMSYELGLKSELFDRRVRLNGAVFAYSIDDPQFSAVGGGS
CCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHEEECCEEEEEECCCCCEEEECCCC
NSNRLINAKKGEAYGLELDSEFVVTPNFVVTAGYSYAHTEIKDRTLAVATCAACTVTDPK
CCCEEEEECCCCEEEEEECCCEEECCCEEEEECCCEEECCCCCCEEEEEEEEEEEECCCC
TASGAALVDGNPFPNAPKYTFDFTARYAYPVASGELFAFTDWKVQGYTNLFLYESKEFYS
CCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEECCEEEEEEEECHHHCC
KGDFEGGLKLGYANKEGGWEVAAFARNITNEHNIKGAIDFNNLTAFVNEPRVIGVSIDAR
CCCCCCCEEEEECCCCCCEEHHHHHHHCCCCCCCEEEEEECCEEEEECCCEEEEEEEECC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA