| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is yhiN [H]
Identifier: 16125725
GI number: 16125725
Start: 1629063
End: 1630244
Strand: Direct
Name: yhiN [H]
Synonym: CC_1477
Alternate gene names: 16125725
Gene position: 1629063-1630244 (Clockwise)
Preceding gene: 16125722
Following gene: 16125727
Centisome position: 40.55
GC content: 67.17
Gene sequence:
>1182_bases TTGGAAACCTTCGACGTTGTGGTGATCGGCGCGGGCGCGGCCGGCATGATGTGCGCCATCGAGGCGGGCAAGCGCGGGCG CTCGGTCCTGGTGATCGACCACGCCAAGGCCCCCGGCGAGAAGATCCGCATCAGCGGCGGCGGGCGGTGCAACTTCACCA ACACCGGCGCGTCGATCCATAACTTCCTGTCGGCCAATCCGAAGTTCGCGCTGTCGGCCCTGCGTCGCTACCGCCCGCGC GACTTCATCGCCCTCGTGGAGCGCTACGGCATCGCCTATCACGAGAAGACCCTGGGTCAGCTGTTCTGCGACGGCTCGGC CAAGCAGATCATCACCATGCTGCTGACCGAGATGAAGGCCGCCGGCGTGACGCTGCGGCTGGAGACCAGCGTGGAGAGCG TGGCCAAGGCGGTGTCTGGATTTGAGGTCTCCCTCTCTTCAGGCAAGGTCGCCTGCGCCTCGCTGGTGGTGGCCAGCGGC GGCAAGTCGATCCCGAAGATGGGCGCGACGGGTCTGGGCTATGACATCGCCAAGCAGTTTGGCCTCAACATTATCGAGAC CCGCCCGGCGCTTGTGCCCCTGACCTTCGAGGCCGGCATGCTGGCGCGCCTGACGCCGCTGTCGGGCGTGGCGCTGGACG CCGTGGTCGGCCACGGCAAGACGAAGTTCCAGGAAGGCATGCTGTTCACGCATCGGGGGCTTTCGGGTCCATCGATCCTG CAGATCTCGTCCTATTGGCGTGAAGGCGACGAGATCCGGGTCGACATGGCGCCGGGCGTCGACGCCCTGGCGGCGCTGAA GACCGCACGCACGGCCACGCCGCGTCAGGCGGTGGCGACGGTGCTGGCGACCTTGCTGCCCAAGCGCGTCGCGCAGGTGA TCGCCGAGGAAGAGGCGCCCGATAAGGGCAATATCGCCGACTGTTCGGACAAGGTGCTGGGGCGGTTGGCCTCTGCGGTC AACGCCTGGACCTTCAAGCCTGTCGGATCGGAAGGCTATCGCACCGCTGAAGTGACGCTGGGTGGGGTCGACACCGAAGC GCTGGACTCCCGCACCCTGGAGGCCAAGGCCGTGCCCGGGCTGTTCTTCATCGGCGAAGTCGTGGACGTCACCGGCTGGC TGGGCGGCTATAACTTCCAGTGGGCCTGGGCGTCGGGCTGGAGCGCGGGGCAGAGCGTCTAG
Upstream 100 bases:
>100_bases GGCGGAAGGTCAAGCCGATGTGGCGGTTCGCCGCCCTTGGATCAGTTGACTTGCGTGGCCGCCTCCGCTCGAAGGAGGGC CAGCAGAGAACGGAAAAGCC
Downstream 100 bases:
>100_bases TAAAAATCCTCCCCCTAGAGGGGAGGTGGCCGAAGGCCGGAGGGGGAAGTGCTGGAGAGCCTGCCGTTTCCCCCTCCGTC GTCTCTTCGAGCCGACACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues METFDVVVIGAGAAGMMCAIEAGKRGRSVLVIDHAKAPGEKIRISGGGRCNFTNTGASIHNFLSANPKFALSALRRYRPR DFIALVERYGIAYHEKTLGQLFCDGSAKQIITMLLTEMKAAGVTLRLETSVESVAKAVSGFEVSLSSGKVACASLVVASG GKSIPKMGATGLGYDIAKQFGLNIIETRPALVPLTFEAGMLARLTPLSGVALDAVVGHGKTKFQEGMLFTHRGLSGPSIL QISSYWREGDEIRVDMAPGVDALAALKTARTATPRQAVATVLATLLPKRVAQVIAEEEAPDKGNIADCSDKVLGRLASAV NAWTFKPVGSEGYRTAEVTLGGVDTEALDSRTLEAKAVPGLFFIGEVVDVTGWLGGYNFQWAWASGWSAGQSV
Sequences:
>Translated_393_residues METFDVVVIGAGAAGMMCAIEAGKRGRSVLVIDHAKAPGEKIRISGGGRCNFTNTGASIHNFLSANPKFALSALRRYRPR DFIALVERYGIAYHEKTLGQLFCDGSAKQIITMLLTEMKAAGVTLRLETSVESVAKAVSGFEVSLSSGKVACASLVVASG GKSIPKMGATGLGYDIAKQFGLNIIETRPALVPLTFEAGMLARLTPLSGVALDAVVGHGKTKFQEGMLFTHRGLSGPSIL QISSYWREGDEIRVDMAPGVDALAALKTARTATPRQAVATVLATLLPKRVAQVIAEEEAPDKGNIADCSDKVLGRLASAV NAWTFKPVGSEGYRTAEVTLGGVDTEALDSRTLEAKAVPGLFFIGEVVDVTGWLGGYNFQWAWASGWSAGQSV >Mature_393_residues METFDVVVIGAGAAGMMCAIEAGKRGRSVLVIDHAKAPGEKIRISGGGRCNFTNTGASIHNFLSANPKFALSALRRYRPR DFIALVERYGIAYHEKTLGQLFCDGSAKQIITMLLTEMKAAGVTLRLETSVESVAKAVSGFEVSLSSGKVACASLVVASG GKSIPKMGATGLGYDIAKQFGLNIIETRPALVPLTFEAGMLARLTPLSGVALDAVVGHGKTKFQEGMLFTHRGLSGPSIL QISSYWREGDEIRVDMAPGVDALAALKTARTATPRQAVATVLATLLPKRVAQVIAEEEAPDKGNIADCSDKVLGRLASAV NAWTFKPVGSEGYRTAEVTLGGVDTEALDSRTLEAKAVPGLFFIGEVVDVTGWLGGYNFQWAWASGWSAGQSV
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=399, Percent_Identity=52.6315789473684, Blast_Score=404, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 41425; Mature: 41425
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METFDVVVIGAGAAGMMCAIEAGKRGRSVLVIDHAKAPGEKIRISGGGRCNFTNTGASIH CCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCHHHH NFLSANPKFALSALRRYRPRDFIALVERYGIAYHEKTLGQLFCDGSAKQIITMLLTEMKA HHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGVTLRLETSVESVAKAVSGFEVSLSSGKVACASLVVASGGKSIPKMGATGLGYDIAKQF CCEEEEEECCHHHHHHHHCCCEEEECCCCEEEHHHEECCCCCCCCCCCCCCCCHHHHHHH GLNIIETRPALVPLTFEAGMLARLTPLSGVALDAVVGHGKTKFQEGMLFTHRGLSGPSIL CCEEEECCCCEEEEEECCCCCEEECCCCCHHHHHHHCCCCHHHHCCEEEEECCCCCCCEE QISSYWREGDEIRVDMAPGVDALAALKTARTATPRQAVATVLATLLPKRVAQVIAEEEAP EEHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC DKGNIADCSDKVLGRLASAVNAWTFKPVGSEGYRTAEVTLGGVDTEALDSRTLEAKAVPG CCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEEECCCCHHHHCCCCCCHHCCCC LFFIGEVVDVTGWLGGYNFQWAWASGWSAGQSV HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure METFDVVVIGAGAAGMMCAIEAGKRGRSVLVIDHAKAPGEKIRISGGGRCNFTNTGASIH CCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCHHHH NFLSANPKFALSALRRYRPRDFIALVERYGIAYHEKTLGQLFCDGSAKQIITMLLTEMKA HHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGVTLRLETSVESVAKAVSGFEVSLSSGKVACASLVVASGGKSIPKMGATGLGYDIAKQF CCEEEEEECCHHHHHHHHCCCEEEECCCCEEEHHHEECCCCCCCCCCCCCCCCHHHHHHH GLNIIETRPALVPLTFEAGMLARLTPLSGVALDAVVGHGKTKFQEGMLFTHRGLSGPSIL CCEEEECCCCEEEEEECCCCCEEECCCCCHHHHHHHCCCCHHHHCCEEEEECCCCCCCEE QISSYWREGDEIRVDMAPGVDALAALKTARTATPRQAVATVLATLLPKRVAQVIAEEEAP EEHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC DKGNIADCSDKVLGRLASAVNAWTFKPVGSEGYRTAEVTLGGVDTEALDSRTLEAKAVPG CCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEEECCCCHHHHCCCCCCHHCCCC LFFIGEVVDVTGWLGGYNFQWAWASGWSAGQSV HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]