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The map label for this gene is capD [H]

Identifier: 16124488

GI number: 16124488

Start: 248028

End: 249119

Strand: Direct

Name: capD [H]

Synonym: CC_0233

Alternate gene names: 16124488

Gene position: 248028-249119 (Clockwise)

Preceding gene: 16124486

Following gene: 16124489

Centisome position: 6.17

GC content: 64.74

Gene sequence:

>1092_bases
GTGGCCGCGCCTCCGAACCGGGTTGAGCGTCGGCAGCGTCGCAGGAGGCTGAACTTGGGTCGCTTTTCTCCCAAATCCCT
CGATCTGGACGGCAAGGTGATCCTGGTCACCGGCGGCACCGGCTCTTTCGGGCGGCGCTTCATCGAGACCGTGCTCCGCC
GCTATGATCCCCGGAAGGTCATTGTCTATTCCCGCGACGAATTGAAGCAGAGCGACATGCAGATCGAGCTGCGCGAGCAG
TTCGACGAGGCGACCGTCGCCAAGATGCGCTTCTTCCTCGGCGACGTGCGCGATCGCGAGCGCCTGACCCTGGCCCTGCG
CGGGGTCGATATCGTCATCCACGCCGCGGCGCTGAAACAGGTGCCGGCGGCCGAGTACAATCCCTCGGAGTGCATCCACA
CCAACGTGCTGGGCGCCGAGAACGTGGTCTGGGCCAGCCTGGCCAATGCGGTAAAGCAGGTTGTGGCCCTGTCCACCGAT
AAGGCCTGCAATCCGACCAACCTCTATGGCGCGACGAAGCTGGCCTCGGACAAGACCTTCGTGGCGGCCAACAACCTGTC
GGGCGACATCGGCACGCGGTTCTGCGTCGTGCGTTACGGCAATGTCGTCGGCTCGCGCGGCAGTGTGGTGCCCCTCTATC
GCCGTCTGCTGAGCCAGGGCGCGACGGAGCTGCCGGTCACCGACCCGCGCATGACCCGCTTCTGGATCACGCTGAACGAG
GGCGTCGATTTTGTGCTCTCGTCGCTGACCATGATGCGTGGCGGCGAGATCTTCGTGCCGAAGATCCCCTCGATGGCCAT
GCCGGATCTCGTCAAGGCGATGTCGTCGACGGCCGCCATGAAGGTGATCGGTATCCGTCCCGGCGAGAAGCTGCACGAGA
TCATGATCAGCGCTGACGACGCCCGATCGACCGTGGAGTTCGACGACCGCTACGCCATCGAGCCCAACTTCGCCGAGTTC
GGTCGTGAGCCCTACGCCGCCTCCGACGGCGCCAAGCCGGTCGCCGAGGATTTCTCGTACAGCAGCGACAACAACCACGA
TTGGCTCAGCCCCGAGGGTCTGCTGGCCATGCTGGAGGAGAAGGCCACGTGA

Upstream 100 bases:

>100_bases
AGGGACAGAAGGCGATCTCGGCGCATATCGCCTTGTAGCGCGACGTGGTTGACGTCCTCTTTACGTGTGGTGGCGCATCA
AGGGGCGTTAACCACGAATC

Downstream 100 bases:

>100_bases
CGGGCGGCTTTCTCCCCTACGGCCGGCAGACGATCGAGGAGGACGATATCGCCGCCGTGGCGGAGGCCCTGCGTGGCGAT
TTCCTGACCACCGGTCCGAC

Product: flagellin modification protein FlmA

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MAAPPNRVERRQRRRRLNLGRFSPKSLDLDGKVILVTGGTGSFGRRFIETVLRRYDPRKVIVYSRDELKQSDMQIELREQ
FDEATVAKMRFFLGDVRDRERLTLALRGVDIVIHAAALKQVPAAEYNPSECIHTNVLGAENVVWASLANAVKQVVALSTD
KACNPTNLYGATKLASDKTFVAANNLSGDIGTRFCVVRYGNVVGSRGSVVPLYRRLLSQGATELPVTDPRMTRFWITLNE
GVDFVLSSLTMMRGGEIFVPKIPSMAMPDLVKAMSSTAAMKVIGIRPGEKLHEIMISADDARSTVEFDDRYAIEPNFAEF
GREPYAASDGAKPVAEDFSYSSDNNHDWLSPEGLLAMLEEKAT

Sequences:

>Translated_363_residues
MAAPPNRVERRQRRRRLNLGRFSPKSLDLDGKVILVTGGTGSFGRRFIETVLRRYDPRKVIVYSRDELKQSDMQIELREQ
FDEATVAKMRFFLGDVRDRERLTLALRGVDIVIHAAALKQVPAAEYNPSECIHTNVLGAENVVWASLANAVKQVVALSTD
KACNPTNLYGATKLASDKTFVAANNLSGDIGTRFCVVRYGNVVGSRGSVVPLYRRLLSQGATELPVTDPRMTRFWITLNE
GVDFVLSSLTMMRGGEIFVPKIPSMAMPDLVKAMSSTAAMKVIGIRPGEKLHEIMISADDARSTVEFDDRYAIEPNFAEF
GREPYAASDGAKPVAEDFSYSSDNNHDWLSPEGLLAMLEEKAT
>Mature_362_residues
AAPPNRVERRQRRRRLNLGRFSPKSLDLDGKVILVTGGTGSFGRRFIETVLRRYDPRKVIVYSRDELKQSDMQIELREQF
DEATVAKMRFFLGDVRDRERLTLALRGVDIVIHAAALKQVPAAEYNPSECIHTNVLGAENVVWASLANAVKQVVALSTDK
ACNPTNLYGATKLASDKTFVAANNLSGDIGTRFCVVRYGNVVGSRGSVVPLYRRLLSQGATELPVTDPRMTRFWITLNEG
VDFVLSSLTMMRGGEIFVPKIPSMAMPDLVKAMSSTAAMKVIGIRPGEKLHEIMISADDARSTVEFDDRYAIEPNFAEFG
REPYAASDGAKPVAEDFSYSSDNNHDWLSPEGLLAMLEEKAT

Specific function: Epimerizes UDP-galactose to UDP-glucose [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869
- InterPro:   IPR013692 [H]

Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 40267; Mature: 40135

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPPNRVERRQRRRRLNLGRFSPKSLDLDGKVILVTGGTGSFGRRFIETVLRRYDPRKV
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE
IVYSRDELKQSDMQIELREQFDEATVAKMRFFLGDVRDRERLTLALRGVDIVIHAAALKQ
EEECHHHHHHCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEHHHHHC
VPAAEYNPSECIHTNVLGAENVVWASLANAVKQVVALSTDKACNPTNLYGATKLASDKTF
CCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEE
VAANNLSGDIGTRFCVVRYGNVVGSRGSVVPLYRRLLSQGATELPVTDPRMTRFWITLNE
EEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC
GVDFVLSSLTMMRGGEIFVPKIPSMAMPDLVKAMSSTAAMKVIGIRPGEKLHEIMISADD
CHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCC
ARSTVEFDDRYAIEPNFAEFGREPYAASDGAKPVAEDFSYSSDNNHDWLSPEGLLAMLEE
CCCEECCCCCEECCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH
KAT
CCC
>Mature Secondary Structure 
AAPPNRVERRQRRRRLNLGRFSPKSLDLDGKVILVTGGTGSFGRRFIETVLRRYDPRKV
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE
IVYSRDELKQSDMQIELREQFDEATVAKMRFFLGDVRDRERLTLALRGVDIVIHAAALKQ
EEECHHHHHHCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEHHHHHC
VPAAEYNPSECIHTNVLGAENVVWASLANAVKQVVALSTDKACNPTNLYGATKLASDKTF
CCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEE
VAANNLSGDIGTRFCVVRYGNVVGSRGSVVPLYRRLLSQGATELPVTDPRMTRFWITLNE
EEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC
GVDFVLSSLTMMRGGEIFVPKIPSMAMPDLVKAMSSTAAMKVIGIRPGEKLHEIMISADD
CHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCC
ARSTVEFDDRYAIEPNFAEFGREPYAASDGAKPVAEDFSYSSDNNHDWLSPEGLLAMLEE
CCCEECCCCCEECCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH
KAT
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA