Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120313

GI number: 16120313

Start: 331672

End: 332220

Strand: Direct

Name: Not Available

Synonym: VNG6441H

Alternate gene names: NA

Gene position: 331672-332220 (Clockwise)

Preceding gene: 16120311

Following gene: 16120317

Centisome position: 90.76

GC content: 52.46

Gene sequence:

>549_bases
ATGAGTTTGTTCATGGGGTGCCACGGTATCCCTTTAGGTTGCGCACACACCAAAAATATGAAGAAGGTTACACTTGAGAT
TCCGGACCGCGACGAACGCGGTGTGTCGCCAGTCATCGGCGTCATCCTCATGGTTGCTATCACCGTTATTCTCGCCGCCG
TCATCGCCAGCTTTGTGCTCGGCTTCGGCGGCTCCGTCAACGAGACCGTCCAAGCCGGCGCGGACGTGAGCGAAAATGGA
GACGGCACTGCAACCGTTACCTGGATTAGCGAAGGCACTGCATCTGAGCTGGAAGTGTCGGTGGAGGGTGTTGACGGGAA
TGTCACTCTCGACCAGGTCGGTGACTCCGCAACAATCCAATACAATAGTGACACTGACAGTGATAATAAAATCGATGATG
ATGATAACACCATTACTGCGACAGATGATGGTGATGGTAATGACCCGGGCGAGGTAACTCTGCAAGTGACCGTTACCGGA
ATAGGTAGCGAAGACACGCGAACGGTTATCGCGCAAGAGGAAGTTACGCTGGAAAACCAAAATAACTAA

Upstream 100 bases:

>100_bases
CGGTTAGCAACTCGTTAATTGATGTCAGACTTTAAGTGTGTGTGGTTGATATAAAATCCTACGCGCAAATCCAACCGGGG
AAAACGGAGGGGCTAGCTCC

Downstream 100 bases:

>100_bases
ACCTCGCTCAAACTTTTCCGTATTTGGCGGTGCTGAACAGTTCTCAACCCGCTTACCCCTGGACGTGATTCGTCAGAGAT
CTACGCTCGGATCTACGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSLFMGCHGIPLGCAHTKNMKKVTLEIPDRDERGVSPVIGVILMVAITVILAAVIASFVLGFGGSVNETVQAGADVSENG
DGTATVTWISEGTASELEVSVEGVDGNVTLDQVGDSATIQYNSDTDSDNKIDDDDNTITATDDGDGNDPGEVTLQVTVTG
IGSEDTRTVIAQEEVTLENQNN

Sequences:

>Translated_182_residues
MSLFMGCHGIPLGCAHTKNMKKVTLEIPDRDERGVSPVIGVILMVAITVILAAVIASFVLGFGGSVNETVQAGADVSENG
DGTATVTWISEGTASELEVSVEGVDGNVTLDQVGDSATIQYNSDTDSDNKIDDDDNTITATDDGDGNDPGEVTLQVTVTG
IGSEDTRTVIAQEEVTLENQNN
>Mature_181_residues
SLFMGCHGIPLGCAHTKNMKKVTLEIPDRDERGVSPVIGVILMVAITVILAAVIASFVLGFGGSVNETVQAGADVSENGD
GTATVTWISEGTASELEVSVEGVDGNVTLDQVGDSATIQYNSDTDSDNKIDDDDNTITATDDGDGNDPGEVTLQVTVTGI
GSEDTRTVIAQEEVTLENQNN

Specific function: Unknown

COG id: COG3430

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18918; Mature: 18787

Theoretical pI: Translated: 3.60; Mature: 3.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFMGCHGIPLGCAHTKNMKKVTLEIPDRDERGVSPVIGVILMVAITVILAAVIASFVL
CCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GFGGSVNETVQAGADVSENGDGTATVTWISEGTASELEVSVEGVDGNVTLDQVGDSATIQ
HCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEHHHCCCEEEEE
YNSDTDSDNKIDDDDNTITATDDGDGNDPGEVTLQVTVTGIGSEDTRTVIAQEEVTLENQ
ECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECEEEEECC
NN
CC
>Mature Secondary Structure 
SLFMGCHGIPLGCAHTKNMKKVTLEIPDRDERGVSPVIGVILMVAITVILAAVIASFVL
CEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GFGGSVNETVQAGADVSENGDGTATVTWISEGTASELEVSVEGVDGNVTLDQVGDSATIQ
HCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEHHHCCCEEEEE
YNSDTDSDNKIDDDDNTITATDDGDGNDPGEVTLQVTVTGIGSEDTRTVIAQEEVTLENQ
ECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECEEEEECC
NN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA