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The map label for this gene is gvpH2

Identifier: 16120167

GI number: 16120167

Start: 188138

End: 188629

Strand: Reverse

Name: gvpH2

Synonym: VNG6235G

Alternate gene names: 16120167

Gene position: 188629-188138 (Counterclockwise)

Preceding gene: 16120168

Following gene: 16120166

Centisome position: 51.62

GC content: 66.87

Gene sequence:

>492_bases
ATGCCCACCGACGATCCGTCCGACCGGCCGAGCGGGCTCCTCGACCAGCTCAGTCGCCTCATCGAGACGCTCGCAGAACT
CGACGACGACAACGGCGAACAGCACGGCCACTCCACGATCGACCGCGGTCGCACACGAATCGACTACGATTACGCCGTTT
CGATCGGTCTGGGTTCCGACGCCCGTTCGCCGTCGACGCCCGCCGGGAACGCCGACGACGCAGGCGATGCGGAGACGGCG
CACATCGAAACCCGCGCGTCCGACGACAGCGACGACCTCGTGGTGGTCGCCGACCTGCCGGGCGTCACCGACGAGACAGC
CGTCGATGCAGCCGTTGAGGACACAGGCGCACTCACGATCAGCGTCGGCGACGACGTTGTCGAGCGACTCACCCTCGACG
ACCCAGGGATGACGATCACGTCGCTGACGGTCACCAACCAGATCCTCGAGCTGCGGGTCACCCCCAGCGAGCCATCAGCC
ACCGACACATGA

Upstream 100 bases:

>100_bases
CGGACGAGTACGAGCGCCGCAAACAGGAGCTGGAAGCCCAACTGCGGACGGCCGAACAGATCCGCGACCAGATGCGCGAC
CGCATGGAGATCAAGAACTG

Downstream 100 bases:

>100_bases
CACCCACGAACCGACACACCCACGGCCAGAACGCACAGCACGCCCGCCGGAACGCCCAACAGAGCCGGGACGCCGCGCGG
CGCAAACTCATCGCCCAACA

Product: GvpH protein, cluster B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MPTDDPSDRPSGLLDQLSRLIETLAELDDDNGEQHGHSTIDRGRTRIDYDYAVSIGLGSDARSPSTPAGNADDAGDAETA
HIETRASDDSDDLVVVADLPGVTDETAVDAAVEDTGALTISVGDDVVERLTLDDPGMTITSLTVTNQILELRVTPSEPSA
TDT

Sequences:

>Translated_163_residues
MPTDDPSDRPSGLLDQLSRLIETLAELDDDNGEQHGHSTIDRGRTRIDYDYAVSIGLGSDARSPSTPAGNADDAGDAETA
HIETRASDDSDDLVVVADLPGVTDETAVDAAVEDTGALTISVGDDVVERLTLDDPGMTITSLTVTNQILELRVTPSEPSA
TDT
>Mature_162_residues
PTDDPSDRPSGLLDQLSRLIETLAELDDDNGEQHGHSTIDRGRTRIDYDYAVSIGLGSDARSPSTPAGNADDAGDAETAH
IETRASDDSDDLVVVADLPGVTDETAVDAAVEDTGALTISVGDDVVERLTLDDPGMTITSLTVTNQILELRVTPSEPSAT
DT

Specific function: May play a structural or regulatory role in gas vesicle synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPH2_HALSA (Q9HHT6)

Other databases:

- EMBL:   X64730
- EMBL:   X94688
- EMBL:   AE004438
- RefSeq:   NP_395755.1
- GeneID:   1449138
- GenomeReviews:   AE004438_GR
- KEGG:   hal:VNG6235G
- NMPDR:   fig|64091.1.peg.2439
- HOGENOM:   HBG096368
- ProtClustDB:   CLSK539581
- BioCyc:   HSP64091:VNG6235G-MONOMER
- GO:   GO:0005773
- InterPro:   IPR008633

Pfam domain/function: PF05455 GvpH

EC number: NA

Molecular weight: Translated: 17106; Mature: 16975

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDDPSDRPSGLLDQLSRLIETLAELDDDNGEQHGHSTIDRGRTRIDYDYAVSIGLGSD
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEECEEEEEEEECCCC
ARSPSTPAGNADDAGDAETAHIETRASDDSDDLVVVADLPGVTDETAVDAAVEDTGALTI
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCEEEE
SVGDDVVERLTLDDPGMTITSLTVTNQILELRVTPSEPSATDT
EECHHHHHHHCCCCCCCEEEEEEEECEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
PTDDPSDRPSGLLDQLSRLIETLAELDDDNGEQHGHSTIDRGRTRIDYDYAVSIGLGSD
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEECEEEEEEEECCCC
ARSPSTPAGNADDAGDAETAHIETRASDDSDDLVVVADLPGVTDETAVDAAVEDTGALTI
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCEEEE
SVGDDVVERLTLDDPGMTITSLTVTNQILELRVTPSEPSATDT
EECHHHHHHHCCCCCCCEEEEEEEECEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1404376; 8763925; 11016950