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The map label for this gene is gvpI2

Identifier: 16120166

GI number: 16120166

Start: 187800

End: 188141

Strand: Reverse

Name: gvpI2

Synonym: VNG6233G

Alternate gene names: 16120166

Gene position: 188141-187800 (Counterclockwise)

Preceding gene: 16120167

Following gene: 16120165

Centisome position: 51.49

GC content: 70.18

Gene sequence:

>342_bases
ATGACACCCACGAACCGACACACCCACGGCCAGAACGCACAGCACGCCCGCCGGAACGCCCAACAGAGCCGGGACGCCGC
GCGGCGCAAACTCATCGCCCAACACGCGGCGCTCGCCGAGCAGCGGGCGCGCAACCGCCGCCGCAGCGACACCGAGCAGC
CCACCAGCGACACCACCAACCCGGCCGCACATTCGACGCTGCCGGCACAACGAACGAACGCCCAAAACGCAGCCCGAAAC
GCCCACTCGACCGTCCCGGAACAGCCCACGCACGCCACGACCGCGGCCCGAGCGCGGCTGTATGGGCTGCGTCTCCACAA
CACGGCGACCACCGACAAATGA

Upstream 100 bases:

>100_bases
TCACCCTCGACGACCCAGGGATGACGATCACGTCGCTGACGGTCACCAACCAGATCCTCGAGCTGCGGGTCACCCCCAGC
GAGCCATCAGCCACCGACAC

Downstream 100 bases:

>100_bases
GCGACCCCAAACCAACGCGCTCACAGGGTGATCTCGCCGAAACCCTGGAGCTGCTGCTCGACAAGGGAGTGGTGGTCAAC
GCCGACATCGCGGTCAGCGT

Product: GvpI protein, cluster B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTPTNRHTHGQNAQHARRNAQQSRDAARRKLIAQHAALAEQRARNRRRSDTEQPTSDTTNPAAHSTLPAQRTNAQNAARN
AHSTVPEQPTHATTAARARLYGLRLHNTATTDK

Sequences:

>Translated_113_residues
MTPTNRHTHGQNAQHARRNAQQSRDAARRKLIAQHAALAEQRARNRRRSDTEQPTSDTTNPAAHSTLPAQRTNAQNAARN
AHSTVPEQPTHATTAARARLYGLRLHNTATTDK
>Mature_112_residues
TPTNRHTHGQNAQHARRNAQQSRDAARRKLIAQHAALAEQRARNRRRSDTEQPTSDTTNPAAHSTLPAQRTNAQNAARNA
HSTVPEQPTHATTAARARLYGLRLHNTATTDK

Specific function: May play a structural or regulatory role in gas vesicle synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPI2_HALSA (Q9HHT7)

Other databases:

- EMBL:   X64730
- EMBL:   X94688
- EMBL:   AE004438
- RefSeq:   NP_395754.1
- GeneID:   1449137
- GenomeReviews:   AE004438_GR
- KEGG:   hal:VNG6233G
- NMPDR:   fig|64091.1.peg.2438
- HOGENOM:   HBG098544
- ProtClustDB:   CLSK539580
- BioCyc:   HSP64091:VNG6233G-MONOMER
- GO:   GO:0005773

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12526; Mature: 12395

Theoretical pI: Translated: 12.40; Mature: 12.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTNRHTHGQNAQHARRNAQQSRDAARRKLIAQHAALAEQRARNRRRSDTEQPTSDTTN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAAHSTLPAQRTNAQNAARNAHSTVPEQPTHATTAARARLYGLRLHNTATTDK
CCCCCCCCCHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TPTNRHTHGQNAQHARRNAQQSRDAARRKLIAQHAALAEQRARNRRRSDTEQPTSDTTN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAAHSTLPAQRTNAQNAARNAHSTVPEQPTHATTAARARLYGLRLHNTATTDK
CCCCCCCCCHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1404376; 8763925; 11016950