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The map label for this gene is sojD

Identifier: 16120076

GI number: 16120076

Start: 90164

End: 90937

Strand: Reverse

Name: sojD

Synonym: VNG6123G

Alternate gene names: 16120076

Gene position: 90937-90164 (Counterclockwise)

Preceding gene: 16120077

Following gene: 16120075

Centisome position: 24.89

GC content: 63.57

Gene sequence:

>774_bases
ATGAAATCTTTCGCTATCAGCCAACAGAAAGGCGGCGTGGGCAAGACCACAAACACCATCAACATTGCCGGGGCACTCGC
CCATCGAGGCCACCAAGTGCTCGCGATCGACGCCGATCCTCAGGGCTACCTCACCAACACCCTCGGCTTCCGCGAGGCCT
ACCAAAGCGACCCGCCGAGCCTCTACGACGCCATCAAGACGCCCCACGACCACGACGCTGCGGACCTCGTCGTCGCCCAC
GCGGAGTTCGACGTCCTCCCCGCGAACATCGACATGTTCCAACTCGAGCAGGACCTCATCGCCTCCGGCCGCCGGCCACG
CCAACGCTTCGGTGACGTCCTCGACCAGCTCCAGGACTACGACTACGTCCTCATCGACGCCCCACCCAGCCTGGGCCCGA
TCAACGACAACGTCCTGCTGGCCGCCGAGGACATCATCATCCCCGTCGAGGCCGACGACTCGTCGGTGCTCGCCATCGAA
CACCTCCTCAACCAGATCGAGAGCCTGGAGCGCGGCTACGACGTCGACATCCGGGAACGCGCTATCCTCATCTCGAACGT
CAACTACCCCCTGGACAACGAGCAAGCCGACGCCATCGCCTGGTTCGAGGACACGTTTGACGGCCGCGCACCAGTCTTCG
AAGTTCGCAACCGGGCTGCTATCAAGCGTTCGCTGGGCGCTGGTGGCTCCATCTTCGGCGAGGACGCCGAGGAGACAGAC
ATGACCACTGTCTACGATGATGTGGCTGCGACCCTCGAGGAGGTGGAGGGCTGA

Upstream 100 bases:

>100_bases
ACCAACAACTCGCCCCAGAGGTGGCGGCGTGTTGGTTAGGTATTCTGCGTGTCTGACGTAAGCTTTTCACGCAGTGCATG
CATTGCACGCACAGCACCCA

Downstream 100 bases:

>100_bases
TGCCGAACGGAGATCGTGACGACGTCGCCGACCGCCTCAGCCGTCGCTTCGACAACGACGAAGAGGCCGATGAAGTAAGC
GGCGAAGAAGAGCAGGCAGC

Product: Spo0A activation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKSFAISQQKGGVGKTTNTINIAGALAHRGHQVLAIDADPQGYLTNTLGFREAYQSDPPSLYDAIKTPHDHDAADLVVAH
AEFDVLPANIDMFQLEQDLIASGRRPRQRFGDVLDQLQDYDYVLIDAPPSLGPINDNVLLAAEDIIIPVEADDSSVLAIE
HLLNQIESLERGYDVDIRERAILISNVNYPLDNEQADAIAWFEDTFDGRAPVFEVRNRAAIKRSLGAGGSIFGEDAEETD
MTTVYDDVAATLEEVEG

Sequences:

>Translated_257_residues
MKSFAISQQKGGVGKTTNTINIAGALAHRGHQVLAIDADPQGYLTNTLGFREAYQSDPPSLYDAIKTPHDHDAADLVVAH
AEFDVLPANIDMFQLEQDLIASGRRPRQRFGDVLDQLQDYDYVLIDAPPSLGPINDNVLLAAEDIIIPVEADDSSVLAIE
HLLNQIESLERGYDVDIRERAILISNVNYPLDNEQADAIAWFEDTFDGRAPVFEVRNRAAIKRSLGAGGSIFGEDAEETD
MTTVYDDVAATLEEVEG
>Mature_257_residues
MKSFAISQQKGGVGKTTNTINIAGALAHRGHQVLAIDADPQGYLTNTLGFREAYQSDPPSLYDAIKTPHDHDAADLVVAH
AEFDVLPANIDMFQLEQDLIASGRRPRQRFGDVLDQLQDYDYVLIDAPPSLGPINDNVLLAAEDIIIPVEADDSSVLAIE
HLLNQIESLERGYDVDIRERAILISNVNYPLDNEQADAIAWFEDTFDGRAPVFEVRNRAAIKRSLGAGGSIFGEDAEETD
MTTVYDDVAATLEEVEG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28152; Mature: 28152

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFAISQQKGGVGKTTNTINIAGALAHRGHQVLAIDADPQGYLTNTLGFREAYQSDPPS
CCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCEEEEEECCCCCCEEHHHHHHHHHCCCCCH
LYDAIKTPHDHDAADLVVAHAEFDVLPANIDMFQLEQDLIASGRRPRQRFGDVLDQLQDY
HHHHHCCCCCCCCHHEEEEECCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
DYVLIDAPPSLGPINDNVLLAAEDIIIPVEADDSSVLAIEHLLNQIESLERGYDVDIRER
CEEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHC
AILISNVNYPLDNEQADAIAWFEDTFDGRAPVFEVRNRAAIKRSLGAGGSIFGEDAEETD
EEEEECCCCCCCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
MTTVYDDVAATLEEVEG
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSFAISQQKGGVGKTTNTINIAGALAHRGHQVLAIDADPQGYLTNTLGFREAYQSDPPS
CCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCEEEEEECCCCCCEEHHHHHHHHHCCCCCH
LYDAIKTPHDHDAADLVVAHAEFDVLPANIDMFQLEQDLIASGRRPRQRFGDVLDQLQDY
HHHHHCCCCCCCCHHEEEEECCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
DYVLIDAPPSLGPINDNVLLAAEDIIIPVEADDSSVLAIEHLLNQIESLERGYDVDIRER
CEEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHC
AILISNVNYPLDNEQADAIAWFEDTFDGRAPVFEVRNRAAIKRSLGAGGSIFGEDAEETD
EEEEECCCCCCCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
MTTVYDDVAATLEEVEG
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]