Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120077

GI number: 16120077

Start: 91385

End: 91681

Strand: Reverse

Name: Not Available

Synonym: VNG6125H

Alternate gene names: NA

Gene position: 91681-91385 (Counterclockwise)

Preceding gene: 16120081

Following gene: 16120076

Centisome position: 25.09

GC content: 57.58

Gene sequence:

>297_bases
ATGGGGTACAGCCACTCCAGTGGCCACCTAACCCTGTTTGTCGTCCAATTCGAGGACGGTGAGTGGGCAATAGTCGTTCG
ATCGAACCATGACCCGGAGCGTGAGCATGGCTACGACGTCGCCGAAAAGGGCGTCTACCTAGACGTCTACCGAGACGAAG
AGAAGTATCGGTCAGAAGAACTCTTCCCGCCAATGCAGCCGAGTGAGGCGCTCACGTACGCCAAAGACCAGATACCAATG
CAGCCCGAGCGCTACGGCACGAGGTTCGAGGAATGGCACGAAATCAGGGCCCAGTGA

Upstream 100 bases:

>100_bases
AAACCCCGTCAAATCCTGCATACGCTGTAGTTCAGAGACGCGAAACATAGAGCTTCGGAACACAACGCCCCCAAGACACC
GTTCGAACGGTTTCCAGTGA

Downstream 100 bases:

>100_bases
CCGACGAGGAGTTCGATGAACTCCACGAGGAGATGGACGAGCAGCGCGACCAACTGCACGAAGATCTCGCGGAGAACCTC
GGCGGCGACTCCGACGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MGYSHSSGHLTLFVVQFEDGEWAIVVRSNHDPEREHGYDVAEKGVYLDVYRDEEKYRSEELFPPMQPSEALTYAKDQIPM
QPERYGTRFEEWHEIRAQ

Sequences:

>Translated_98_residues
MGYSHSSGHLTLFVVQFEDGEWAIVVRSNHDPEREHGYDVAEKGVYLDVYRDEEKYRSEELFPPMQPSEALTYAKDQIPM
QPERYGTRFEEWHEIRAQ
>Mature_97_residues
GYSHSSGHLTLFVVQFEDGEWAIVVRSNHDPEREHGYDVAEKGVYLDVYRDEEKYRSEELFPPMQPSEALTYAKDQIPMQ
PERYGTRFEEWHEIRAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11637; Mature: 11506

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYSHSSGHLTLFVVQFEDGEWAIVVRSNHDPEREHGYDVAEKGVYLDVYRDEEKYRSEE
CCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHCHHH
LFPPMQPSEALTYAKDQIPMQPERYGTRFEEWHEIRAQ
CCCCCCCCCCCHHHCCCCCCCCHHHCCCHHHHHHHCCC
>Mature Secondary Structure 
GYSHSSGHLTLFVVQFEDGEWAIVVRSNHDPEREHGYDVAEKGVYLDVYRDEEKYRSEE
CCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHCHHH
LFPPMQPSEALTYAKDQIPMQPERYGTRFEEWHEIRAQ
CCCCCCCCCCCHHHCCCCCCCCHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA