Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120075

GI number: 16120075

Start: 89703

End: 90164

Strand: Reverse

Name: Not Available

Synonym: VNG6121H

Alternate gene names: NA

Gene position: 90164-89703 (Counterclockwise)

Preceding gene: 16120076

Following gene: 16120074

Centisome position: 24.67

GC content: 58.01

Gene sequence:

>462_bases
ATGCCGAACGGAGATCGTGACGACGTCGCCGACCGCCTCAGCCGTCGCTTCGACAACGACGAAGAGGCCGATGAAGTAAG
CGGCGAAGAAGAGCAGGCAGCGAACGCTCAGCAGCCCCCTCATGAGGAGAACGCATCGGATGCAGGGAACGAAGAGAACG
AGGGAGGCAAGATGAATGCAGAGGCTGAGGTGAGTTCAAGGAATGCAATGCACGTGAGGAACGTGAAGAGCGAGTGGACC
TCAAAGAGCTTCTACCTCCCCGAGTTTCTGAAAGACGACCTGAAGACGACGTACAAGGAGACGGATCTCGAGTTCGAGAT
GGAGCGCGGCGAGGAGCTGCCGAAGACCCGGCACTACTACCCCCTCGTCGTGGCACTGGGCATTGAACGCATTGCACGCA
TGGACCCCCAAGAAATCAATGAACGCATTGAAGGCCTTGAAGAGCGCGGCGAGCCAGAGTAG

Upstream 100 bases:

>100_bases
TGGGCGCTGGTGGCTCCATCTTCGGCGAGGACGCCGAGGAGACAGACATGACCACTGTCTACGATGATGTGGCTGCGACC
CTCGAGGAGGTGGAGGGCTG

Downstream 100 bases:

>100_bases
CTTCCACCTACGCGTTCGCGACTCCTCGAGACTGTGACGTTTGGGCCCGCCGCGGCGAATCGTCGAAACGGACGCACCGC
TTCGGACGTGTTGCGAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPNGDRDDVADRLSRRFDNDEEADEVSGEEEQAANAQQPPHEENASDAGNEENEGGKMNAEAEVSSRNAMHVRNVKSEWT
SKSFYLPEFLKDDLKTTYKETDLEFEMERGEELPKTRHYYPLVVALGIERIARMDPQEINERIEGLEERGEPE

Sequences:

>Translated_153_residues
MPNGDRDDVADRLSRRFDNDEEADEVSGEEEQAANAQQPPHEENASDAGNEENEGGKMNAEAEVSSRNAMHVRNVKSEWT
SKSFYLPEFLKDDLKTTYKETDLEFEMERGEELPKTRHYYPLVVALGIERIARMDPQEINERIEGLEERGEPE
>Mature_152_residues
PNGDRDDVADRLSRRFDNDEEADEVSGEEEQAANAQQPPHEENASDAGNEENEGGKMNAEAEVSSRNAMHVRNVKSEWTS
KSFYLPEFLKDDLKTTYKETDLEFEMERGEELPKTRHYYPLVVALGIERIARMDPQEINERIEGLEERGEPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17574; Mature: 17443

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNGDRDDVADRLSRRFDNDEEADEVSGEEEQAANAQQPPHEENASDAGNEENEGGKMNA
CCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EAEVSSRNAMHVRNVKSEWTSKSFYLPEFLKDDLKTTYKETDLEFEMERGEELPKTRHYY
CHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHH
PLVVALGIERIARMDPQEINERIEGLEERGEPE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PNGDRDDVADRLSRRFDNDEEADEVSGEEEQAANAQQPPHEENASDAGNEENEGGKMNA
CCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EAEVSSRNAMHVRNVKSEWTSKSFYLPEFLKDDLKTTYKETDLEFEMERGEELPKTRHYY
CHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHH
PLVVALGIERIARMDPQEINERIEGLEERGEPE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA