Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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The map label for this gene is sojA

Identifier: 16119986

GI number: 16119986

Start: 4982

End: 5401

Strand: Reverse

Name: sojA

Synonym: VNG6010G

Alternate gene names: NA

Gene position: 5401-4982 (Counterclockwise)

Preceding gene: 16119987

Following gene: 16119983

Centisome position: 1.48

GC content: 52.86

Gene sequence:

>420_bases
ATGGCCTTTGGCCGTGATTTGGTAGAGAGTACTCTCCGGTTGTCTGACGGAGATTTATATTATACGAGGAACGTGTGTTA
CTCGAATGGCTCGAAAAACCCGTATTATACGAGATATACGGAGGGTGGTAGCATGAGGATCGACGTCGGAATGCAGAAAG
GAGGAGTTGGGAAAACGACGACAAGCATCAATCTCGCCGGTGCGCTTGCCGACAGAGGACACGATGTCCTGGCTGTTGAT
GCTGATCCACAGGGTGGACTCACACTCAAACTCGGCCACCGCGAGCAGTATCGGGAGGGTGAGTACGCGCTCTATGACGT
CCTCTCTGAGATGGGGCAGCTCACCCTTGACGACCTCGATGAACTAGTCGTCCAAGGAGCTGGACGTGTTGCGAAGATAG
GGAATAATGCACAGGTCTGA

Upstream 100 bases:

>100_bases
CGATAAGTCGCCCGTGTAGGGTGAATCATTGCTCAGCTTTGCACGTCAGCGTCAGAGAAGTCCGTGATCGGCATCACCCG
TCTTTGCTACCGCTTACATC

Downstream 100 bases:

>100_bases
CGACGATCACTCGCAGGACTGAATGGTCTCGCATACCCCTGCTCACAAGTGGATCGCCCGATTTTACCAGAACAATGGGA
AAATTTGTTTCCGCTAGCAG

Product: Spo0A activation inhibitor

Products: NA

Alternate protein names: Cobyrinic Acid Ac-Diamide Synthase; Chromosome Partitioning Protein; Spo0A Activation Inhibitor; Plasmid Partitioning Protein Soj; ATPase Involved In Chromosome Partitioning

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAFGRDLVESTLRLSDGDLYYTRNVCYSNGSKNPYYTRYTEGGSMRIDVGMQKGGVGKTTTSINLAGALADRGHDVLAVD
ADPQGGLTLKLGHREQYREGEYALYDVLSEMGQLTLDDLDELVVQGAGRVAKIGNNAQV

Sequences:

>Translated_139_residues
MAFGRDLVESTLRLSDGDLYYTRNVCYSNGSKNPYYTRYTEGGSMRIDVGMQKGGVGKTTTSINLAGALADRGHDVLAVD
ADPQGGLTLKLGHREQYREGEYALYDVLSEMGQLTLDDLDELVVQGAGRVAKIGNNAQV
>Mature_138_residues
AFGRDLVESTLRLSDGDLYYTRNVCYSNGSKNPYYTRYTEGGSMRIDVGMQKGGVGKTTTSINLAGALADRGHDVLAVDA
DPQGGLTLKLGHREQYREGEYALYDVLSEMGQLTLDDLDELVVQGAGRVAKIGNNAQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15070; Mature: 14939

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFGRDLVESTLRLSDGDLYYTRNVCYSNGSKNPYYTRYTEGGSMRIDVGMQKGGVGKTT
CCCCHHHHHHHHCCCCCCEEEEECEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCE
TSINLAGALADRGHDVLAVDADPQGGLTLKLGHREQYREGEYALYDVLSEMGQLTLDDLD
EEEEEEEEECCCCCEEEEEECCCCCCEEEEECCCHHHCCCCHHHHHHHHHHCCCCHHHHH
ELVVQGAGRVAKIGNNAQV
HHHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
AFGRDLVESTLRLSDGDLYYTRNVCYSNGSKNPYYTRYTEGGSMRIDVGMQKGGVGKTT
CCCHHHHHHHHCCCCCCEEEEECEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCE
TSINLAGALADRGHDVLAVDADPQGGLTLKLGHREQYREGEYALYDVLSEMGQLTLDDLD
EEEEEEEEECCCCCEEEEEECCCCCCEEEEECCCHHHCCCCHHHHHHHHHHCCCCHHHHH
ELVVQGAGRVAKIGNNAQV
HHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA