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The map label for this gene is xylB [H]

Identifier: 160903034

GI number: 160903034

Start: 1740370

End: 1741755

Strand: Direct

Name: xylB [H]

Synonym: Pmob_1596

Alternate gene names: 160903034

Gene position: 1740370-1741755 (Clockwise)

Preceding gene: 160903033

Following gene: 160903035

Centisome position: 80.22

GC content: 31.67

Gene sequence:

>1386_bases
ATGAAAGTGTTGGGGATAGATTTTGGGACAACTTCTTACAGTGCATGCTTATACGACAGTAAAAGTAAAGAAATTGCCTT
CGCAAATAAACAAAATACAAGTTTAATTTTCGATGGTTTAAAAAGTGAATTTGACATAAAAAAATTAGAAAGTGATTTTG
ATTCTTTTATAAAATATCTAACTAAAGTTTTTGATTTAAAAGGAACCAAAGCTATTTCGGTCACCGGAAATATGCATAGT
TTTTTTCTTGTGAAAGATAACACCCCAATAACAAATATAATTACTTGGCAAGATCAAAGAGCTTTAGAGAAAAATGAAAA
TGGAATTACATATGTAGATTATATTAATAAAAATTATAAATCGCTATTTTCAAAATTTCAATACTTTCTAAGCCCAGGGT
ATGCTGTCACAACTTTACTCCCTTTACAAAAATTTCTACGTACTTCGGGGTTTTCTCTCCATTTTGCTCCAGATTTCATT
GTAAAAAAGCTCACTGGAGATACTACATACGATTCAATACCTATAGATCCTACTATAGCGCATAGCAGTGGATTTTACGC
ATTAGAAAACAAAGATTGGAATTGGAAACTAATCAATGCATTGGGATACAGCGAAATTCACCTTCCCAAAATTGCTGAAC
CTGGAACTTTTGTTGGGAATGTTGGAAAGTACATCCCTCAATTAACTGGTACCCCGATTTTTTTAGGGATGGGTGACAAT
CAAGCGTCAGTTTTAGGCGCAATTTTTGAAAAGAAACTTGAAACTTCTTACAATAAAATAAATTCGATGGTTATAAGCAT
AGGAACAAGTGGGCAAATATCTGCTGTAGTTAAGGAAATAAAAAGGATTTCAAAATACATAGATTATCGACCTTTTTTAA
ATAATTATTATTTATTAGTTGGAGCTAGTTTATCCGCTGGTAAGACTATTGACACTATTAAAGATTTTATAAAAAGCTTT
ATAAGCTTGGCTTGTAAAAAAAACGTTGAAGACGATTATGTTTACGAATTCATCAAGAATTCAATGTTACCTGTTTCACC
TTTAAAATTTCGCACTACATTAAACGGTACACGTTATAATCCTCAATTGAGAGGAGCCATTGATAACATAAGTTTAAACA
ACTTTACAATTCAGAATCTAGTTACAGCAGCTGCATATGGAATAGTGGAAGAACTCTACAAATATTATAGAGAAATGAAT
ATTGATTATGAAGATATCTTAGGGGTGGGGAATGGTCTACAGAAAAATAAATATTTTATAAGCATCATAAAAAAAGTCTT
TAATAAAAATTTTTACCTAAGTAAATTGGAAGAAACTACAAGTTTTGGCGCTGCTGTGTGCGCAATGGAAGGAAAAACGA
AAGGGGAGGTCGACATTCAAGGATGA

Upstream 100 bases:

>100_bases
TCGTATTCAATATAACACCATACGAAATAAAACCCTTTAAAGTGTGATTAAAATGAAAAAAATAATTTTTGTAATGGGAA
TTACTTAGAAGGTGTAAAAA

Downstream 100 bases:

>100_bases
ATAAAGAGAAAATTCAAGAACAACTAAAGAAACCGTTGATAATTAAAGAAACAAGGTACACTTACTAATCAAAACGTTGT
TCTTTCCACTGATTGTTGAA

Product: carbohydrate kinase FGGY

Products: ADP; 6-phospho-D-gluconate

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKVLGIDFGTTSYSACLYDSKSKEIAFANKQNTSLIFDGLKSEFDIKKLESDFDSFIKYLTKVFDLKGTKAISVTGNMHS
FFLVKDNTPITNIITWQDQRALEKNENGITYVDYINKNYKSLFSKFQYFLSPGYAVTTLLPLQKFLRTSGFSLHFAPDFI
VKKLTGDTTYDSIPIDPTIAHSSGFYALENKDWNWKLINALGYSEIHLPKIAEPGTFVGNVGKYIPQLTGTPIFLGMGDN
QASVLGAIFEKKLETSYNKINSMVISIGTSGQISAVVKEIKRISKYIDYRPFLNNYYLLVGASLSAGKTIDTIKDFIKSF
ISLACKKNVEDDYVYEFIKNSMLPVSPLKFRTTLNGTRYNPQLRGAIDNISLNNFTIQNLVTAAAYGIVEELYKYYREMN
IDYEDILGVGNGLQKNKYFISIIKKVFNKNFYLSKLEETTSFGAAVCAMEGKTKGEVDIQG

Sequences:

>Translated_461_residues
MKVLGIDFGTTSYSACLYDSKSKEIAFANKQNTSLIFDGLKSEFDIKKLESDFDSFIKYLTKVFDLKGTKAISVTGNMHS
FFLVKDNTPITNIITWQDQRALEKNENGITYVDYINKNYKSLFSKFQYFLSPGYAVTTLLPLQKFLRTSGFSLHFAPDFI
VKKLTGDTTYDSIPIDPTIAHSSGFYALENKDWNWKLINALGYSEIHLPKIAEPGTFVGNVGKYIPQLTGTPIFLGMGDN
QASVLGAIFEKKLETSYNKINSMVISIGTSGQISAVVKEIKRISKYIDYRPFLNNYYLLVGASLSAGKTIDTIKDFIKSF
ISLACKKNVEDDYVYEFIKNSMLPVSPLKFRTTLNGTRYNPQLRGAIDNISLNNFTIQNLVTAAAYGIVEELYKYYREMN
IDYEDILGVGNGLQKNKYFISIIKKVFNKNFYLSKLEETTSFGAAVCAMEGKTKGEVDIQG
>Mature_461_residues
MKVLGIDFGTTSYSACLYDSKSKEIAFANKQNTSLIFDGLKSEFDIKKLESDFDSFIKYLTKVFDLKGTKAISVTGNMHS
FFLVKDNTPITNIITWQDQRALEKNENGITYVDYINKNYKSLFSKFQYFLSPGYAVTTLLPLQKFLRTSGFSLHFAPDFI
VKKLTGDTTYDSIPIDPTIAHSSGFYALENKDWNWKLINALGYSEIHLPKIAEPGTFVGNVGKYIPQLTGTPIFLGMGDN
QASVLGAIFEKKLETSYNKINSMVISIGTSGQISAVVKEIKRISKYIDYRPFLNNYYLLVGASLSAGKTIDTIKDFIKSF
ISLACKKNVEDDYVYEFIKNSMLPVSPLKFRTTLNGTRYNPQLRGAIDNISLNNFTIQNLVTAAAYGIVEELYKYYREMN
IDYEDILGVGNGLQKNKYFISIIKKVFNKNFYLSKLEETTSFGAAVCAMEGKTKGEVDIQG

Specific function: Key Enzyme In The Regulation Of Glycerol Uptake And Metabolism. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI74315356, Length=480, Percent_Identity=22.2916666666667, Blast_Score=92, Evalue=1e-18,

Paralogues:

None

Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.12

Molecular weight: Translated: 51902; Mature: 51902

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLGIDFGTTSYSACLYDSKSKEIAFANKQNTSLIFDGLKSEFDIKKLESDFDSFIKYL
CEEEEEECCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
TKVFDLKGTKAISVTGNMHSFFLVKDNTPITNIITWQDQRALEKNENGITYVDYINKNYK
HHHHCCCCCEEEEEECCCEEEEEEECCCCCEEEEEECCHHHHHCCCCCEEEEEECCCHHH
SLFSKFQYFLSPGYAVTTLLPLQKFLRTSGFSLHFAPDFIVKKLTGDTTYDSIPIDPTIA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCCCCCCEEE
HSSGFYALENKDWNWKLINALGYSEIHLPKIAEPGTFVGNVGKYIPQLTGTPIFLGMGDN
CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHCCHHHHHHHCCCCEEEEEECCC
QASVLGAIFEKKLETSYNKINSMVISIGTSGQISAVVKEIKRISKYIDYRPFLNNYYLLV
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GASLSAGKTIDTIKDFIKSFISLACKKNVEDDYVYEFIKNSMLPVSPLKFRTTLNGTRYN
ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEC
PQLRGAIDNISLNNFTIQNLVTAAAYGIVEELYKYYREMNIDYEDILGVGNGLQKNKYFI
CHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHH
SIIKKVFNKNFYLSKLEETTSFGAAVCAMEGKTKGEVDIQG
HHHHHHHCCCCEEHHHHHHHHHCEEEEEECCCCCCCEEECC
>Mature Secondary Structure
MKVLGIDFGTTSYSACLYDSKSKEIAFANKQNTSLIFDGLKSEFDIKKLESDFDSFIKYL
CEEEEEECCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
TKVFDLKGTKAISVTGNMHSFFLVKDNTPITNIITWQDQRALEKNENGITYVDYINKNYK
HHHHCCCCCEEEEEECCCEEEEEEECCCCCEEEEEECCHHHHHCCCCCEEEEEECCCHHH
SLFSKFQYFLSPGYAVTTLLPLQKFLRTSGFSLHFAPDFIVKKLTGDTTYDSIPIDPTIA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCCCCCCEEE
HSSGFYALENKDWNWKLINALGYSEIHLPKIAEPGTFVGNVGKYIPQLTGTPIFLGMGDN
CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHCCHHHHHHHCCCCEEEEEECCC
QASVLGAIFEKKLETSYNKINSMVISIGTSGQISAVVKEIKRISKYIDYRPFLNNYYLLV
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GASLSAGKTIDTIKDFIKSFISLACKKNVEDDYVYEFIKNSMLPVSPLKFRTTLNGTRYN
ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEC
PQLRGAIDNISLNNFTIQNLVTAAAYGIVEELYKYYREMNIDYEDILGVGNGLQKNKYFI
CHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHH
SIIKKVFNKNFYLSKLEETTSFGAAVCAMEGKTKGEVDIQG
HHHHHHHCCCCEEHHHHHHHHHCEEEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-gluconate

Specific reaction: ATP + D-gluconate = ADP + 6-phospho-D-gluconate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA