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The map label for this gene is xynC [H]

Identifier: 160903033

GI number: 160903033

Start: 1739849

End: 1740193

Strand: Direct

Name: xynC [H]

Synonym: Pmob_1595

Alternate gene names: 160903033

Gene position: 1739849-1740193 (Clockwise)

Preceding gene: 160903021

Following gene: 160903034

Centisome position: 80.19

GC content: 33.04

Gene sequence:

>345_bases
TTGATTTTAAGGAGAGATATGATGGCTTTATTAGAAGTAAACTTTATGTCGAAGTCTTTAATGAGAAAAGTACCAGTTAT
GGTGATTTTACCGGTTGATAAATTAAATTTTTCAATTACATCTGAAATGACAGACAATACTCATTTTAAAACGCTATATC
TTCTTCATGGGGGATTTGGTAATTATACAAGCTGGGTTTCAGAAACAAGAATTCAAAGATTGGCTGAAGGAAAGAACCTG
GCTGTGGTGATGCCTTCTGGTGATAATTCTTTTTATTTGGATCAACCGGAATTTGGTAATTTTGGGATACTTATATTGAA
AAAGTTCTTGACTGGCTTCCATTGA

Upstream 100 bases:

>100_bases
TCGTTTTCTAAATAATGCATACATAGAAAAAGAAAGACGGCAAAAATGGTACAATTTAATATAGTTAAAAAATAATTCAA
ATTCGTTAAGAGTCAAAAAA

Downstream 100 bases:

>100_bases
AAAATTGATCGCCAGCCGTTGAATGTAATTTAATTCAAGGAGAGGAAACTAAAATTACCTTTTAAAAATCATAAAATCGT
ATTCAATATAACACCATACG

Product: hypothetical protein

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MILRRDMMALLEVNFMSKSLMRKVPVMVILPVDKLNFSITSEMTDNTHFKTLYLLHGGFGNYTSWVSETRIQRLAEGKNL
AVVMPSGDNSFYLDQPEFGNFGILILKKFLTGFH

Sequences:

>Translated_114_residues
MILRRDMMALLEVNFMSKSLMRKVPVMVILPVDKLNFSITSEMTDNTHFKTLYLLHGGFGNYTSWVSETRIQRLAEGKNL
AVVMPSGDNSFYLDQPEFGNFGILILKKFLTGFH
>Mature_114_residues
MILRRDMMALLEVNFMSKSLMRKVPVMVILPVDKLNFSITSEMTDNTHFKTLYLLHGGFGNYTSWVSETRIQRLAEGKNL
AVVMPSGDNSFYLDQPEFGNFGILILKKFLTGFH

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 13066; Mature: 13066

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRRDMMALLEVNFMSKSLMRKVPVMVILPVDKLNFSITSEMTDNTHFKTLYLLHGGFG
CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCEEEEEEEECCCC
NYTSWVSETRIQRLAEGKNLAVVMPSGDNSFYLDQPEFGNFGILILKKFLTGFH
CHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MILRRDMMALLEVNFMSKSLMRKVPVMVILPVDKLNFSITSEMTDNTHFKTLYLLHGGFG
CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCEEEEEEEECCCC
NYTSWVSETRIQRLAEGKNLAVVMPSGDNSFYLDQPEFGNFGILILKKFLTGFH
CHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]