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The map label for this gene is rpsT

Identifier: 160902830

GI number: 160902830

Start: 1491651

End: 1491953

Strand: Direct

Name: rpsT

Synonym: Pmob_1384

Alternate gene names: 160902830

Gene position: 1491651-1491953 (Clockwise)

Preceding gene: 160902829

Following gene: 160902831

Centisome position: 68.75

GC content: 32.34

Gene sequence:

>303_bases
TTGCCAAATAAAAAATCAGCAGAAAAAAGGGTTAGACAATCAGAACAAAGAAGACAAAAAAATCGTGGATATCAAAAGAG
GATCAAGGAAATTTCTAAGGAAATAGACAAGAAAATACATGAAAATGCCGAAAGAGAAGAATTGATGCAGTTATTAAGCA
AGTCTTTTAAAATTATTGACACTGCGAAATCACATGGTGCTGTACATAAAAACTACGCAGCAAGGAAAAAATCGAAATTA
CATTTAAAGGTTAAAAAATATTTAGGCGAAATGGCACCAGAAAGTTCACCAGTAAACGAGTGA

Upstream 100 bases:

>100_bases
TGAAAGCAGCATTAGGTTTGTAATTTACTAAAAGGCAAAAGATTTTGATTTTAAAAGGGTTACAGGACGAAAAATAAAAG
TTGAGGAGGTATTTAAAAAA

Downstream 100 bases:

>100_bases
TCCATAAATTTTATAATCAAAAAGATTATAACCCCCTTTTTTGGGAGGTATTGAAATTTTGAATTCGTATTCTTTTTTAC
AAAAGTCTCAAATAAATACA

Product: 30S ribosomal protein S20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MPNKKSAEKRVRQSEQRRQKNRGYQKRIKEISKEIDKKIHENAEREELMQLLSKSFKIIDTAKSHGAVHKNYAARKKSKL
HLKVKKYLGEMAPESSPVNE

Sequences:

>Translated_100_residues
MPNKKSAEKRVRQSEQRRQKNRGYQKRIKEISKEIDKKIHENAEREELMQLLSKSFKIIDTAKSHGAVHKNYAARKKSKL
HLKVKKYLGEMAPESSPVNE
>Mature_99_residues
PNKKSAEKRVRQSEQRRQKNRGYQKRIKEISKEIDKKIHENAEREELMQLLSKSFKIIDTAKSHGAVHKNYAARKKSKLH
LKVKKYLGEMAPESSPVNE

Specific function: Binds directly to 16S ribosomal RNA

COG id: COG0268

COG function: function code J; Ribosomal protein S20

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S20P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS20_PETMO (A9BHX3)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001568411.1
- ProteinModelPortal:   A9BHX3
- SMR:   A9BHX3
- GeneID:   5757987
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_1384
- HOGENOM:   HBG734145
- BioCyc:   PMOB403833:PMOB_1384-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00500
- InterPro:   IPR002583
- Gene3D:   G3DSA:1.20.58.110
- ProDom:   PD004231
- TIGRFAMs:   TIGR00029

Pfam domain/function: PF01649 Ribosomal_S20p; SSF46992 Ribosomal_S20p

EC number: NA

Molecular weight: Translated: 11743; Mature: 11612

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNKKSAEKRVRQSEQRRQKNRGYQKRIKEISKEIDKKIHENAEREELMQLLSKSFKIID
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TAKSHGAVHKNYAARKKSKLHLKVKKYLGEMAPESSPVNE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PNKKSAEKRVRQSEQRRQKNRGYQKRIKEISKEIDKKIHENAEREELMQLLSKSFKIID
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TAKSHGAVHKNYAARKKSKLHLKVKKYLGEMAPESSPVNE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA