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The map label for this gene is oppA [C]

Identifier: 160902773

GI number: 160902773

Start: 1418757

End: 1420520

Strand: Direct

Name: oppA [C]

Synonym: Pmob_1326

Alternate gene names: 160902773

Gene position: 1418757-1420520 (Clockwise)

Preceding gene: 160902772

Following gene: 160902774

Centisome position: 65.39

GC content: 41.21

Gene sequence:

>1764_bases
ATGAGAAAGTTGTTGGTACTTTTAGTAGTAGCTTTAAGCGCTTTGACGATTTTTGCGCAAGAAGCTTACAACCCCGAGTG
GCTTATCGCCGATGTAGAAGGTGGTCAAAAGGGTGGAACCTTATACCTTGCAACAACTTCTGGCCCAAAAACTCTAAATA
CTTACTGGGCTCAAGAGACATCATCTTCTATCATCATCAATCAAGGTGGTGTATCGTTACTCAGCAGAGATTTTTATGGC
CAACCAACACAACCATCGCTTGCAAAGGATTGGGGTGTTGAGCGTACAGCAGATGGAGGCACACTTTACTGGTTTGAGAT
GAGAGAAGGGGTTAAATGGTCCGATGGTCACCCACTAACCGTCGACGATGTAGTATTCACATGGGAGAAGATAATAGTCC
CAGATTTAACCGCAGATGGTAACGATGTTTATATGGACGCTGAAGGTAATCTTCCAGAATTGACTGTCGAAGGTAATAGA
ATAATGTTCAAATATCCTACAGTATTCAGATTTGGGCTTGAAACCGTCGGTGGATTCGCCATAATGCCGAAACACGCTTT
AGAGGATAAAGTAACGGATGCAGAAACCTTCCAGTCCACTTGGACGGTAGAACAAGTTGATCAAATAGTAGTTGGTGGAC
CTTTTAAAGTTACAGAGTACACTGAAGGAGTCAGGGTAGTTTTGGAAAGAAACCCATACTACTTTGAAAAGTCAAAAGAC
GGGGTCCAACTTCCTTACTTAGATAGAATTGTCTTCGAAATAGTGACAGATACTAATGTTGAAAGATTAAGATTCGAGGC
AGGAGAAACAGATATGCATGGCCCTGCAGCTAAAGATTTCCCAGCTTTGAGAGCTCAAGCCGAGGAAAAAGGTTGGAATG
TAATAGTAGGTCCAGCAACCGCCGGGTCAAACTTTATAGCTTTCAATTTCAACGCAGCCGATCCTGTTCATAGGGCATGG
TTCAGAAACGATAATTTCAGAAAAGCTGTAGCATATGCCTTTGATAAACAAACTATCATAGACACGCTGTACAACGGTTT
AGCCGTACCTTGTTATGGTCCAAGAACTAATTCTTCAGCTTTCTACAATCCTGAAATTGAGGAGTTAGGATTCAGATATT
CTCTTGTTACAGCACAGAGACTGTTAAGAGAAGCAGGTTTTAGTTGGAATGAGAAAGGCGAGTTAGTCGATTGGGATGGA
AATGTTGTTGAGTTTGAATTGAACACCAATGGTGAAAACGTGATGAGGAATGAAATTTCTGTTATTTTAGTGGATGCCCT
AGGGAAACTTGGAATCAAAGTTAATTACAGGCCAATGCAATTCAACGCAGTGGTTCAAAAAATGTACTCAGCTAACTGGG
ATGCAATTATCATTGGATTAGTTGGGGGAGACGATCCTGGATGGGGTACAAACGTTTGGTTGTTAGATGGTGGGTTACAT
TTCTGGAACTGGTCTCCTGAAGTTATGGAATGGGTTGATCCAGATGAATATTGGGCACACCCTGCTGAGCAAAGAATTGA
TGAGATTATGAGAGTTCAGCGTTCGATTTTAGATAAAGATGAGCTCCAAGAGCTTTGGGACGAATGGCAAATGTTGGTTG
CGGAAAATCAGATCTTAGTTTACACAATTTCACAGAATTACTTGAACATGCATAAAAATACTTTACATTTGTATCCTGTA
GAAAAATATGGAACGATCAACCCTTACGGTTATTCCTACTCACCAGGTTTGTGGAAAATTGAGTACGCCTGGAAAGAACA
GTAA

Upstream 100 bases:

>100_bases
CCATTATGTTGCTTGTTTCTTATACAAAGAGGATAGAGATAGAGGTTTATCACAAGAAAAAGAGGGTAAGTTGGTAAAAT
AACTTAAAGGAGGGATTCAC

Downstream 100 bases:

>100_bases
TTGTTAGGTTTATTAAAAAAGGGCGGAAGGGAAACCTTCTGCCTTTTTAAAATCATAGTAGGGAGGCTTCGTGATCTTGC
TCAAATATATAATTAGAAGG

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MRKLLVLLVVALSALTIFAQEAYNPEWLIADVEGGQKGGTLYLATTSGPKTLNTYWAQETSSSIIINQGGVSLLSRDFYG
QPTQPSLAKDWGVERTADGGTLYWFEMREGVKWSDGHPLTVDDVVFTWEKIIVPDLTADGNDVYMDAEGNLPELTVEGNR
IMFKYPTVFRFGLETVGGFAIMPKHALEDKVTDAETFQSTWTVEQVDQIVVGGPFKVTEYTEGVRVVLERNPYYFEKSKD
GVQLPYLDRIVFEIVTDTNVERLRFEAGETDMHGPAAKDFPALRAQAEEKGWNVIVGPATAGSNFIAFNFNAADPVHRAW
FRNDNFRKAVAYAFDKQTIIDTLYNGLAVPCYGPRTNSSAFYNPEIEELGFRYSLVTAQRLLREAGFSWNEKGELVDWDG
NVVEFELNTNGENVMRNEISVILVDALGKLGIKVNYRPMQFNAVVQKMYSANWDAIIIGLVGGDDPGWGTNVWLLDGGLH
FWNWSPEVMEWVDPDEYWAHPAEQRIDEIMRVQRSILDKDELQELWDEWQMLVAENQILVYTISQNYLNMHKNTLHLYPV
EKYGTINPYGYSYSPGLWKIEYAWKEQ

Sequences:

>Translated_587_residues
MRKLLVLLVVALSALTIFAQEAYNPEWLIADVEGGQKGGTLYLATTSGPKTLNTYWAQETSSSIIINQGGVSLLSRDFYG
QPTQPSLAKDWGVERTADGGTLYWFEMREGVKWSDGHPLTVDDVVFTWEKIIVPDLTADGNDVYMDAEGNLPELTVEGNR
IMFKYPTVFRFGLETVGGFAIMPKHALEDKVTDAETFQSTWTVEQVDQIVVGGPFKVTEYTEGVRVVLERNPYYFEKSKD
GVQLPYLDRIVFEIVTDTNVERLRFEAGETDMHGPAAKDFPALRAQAEEKGWNVIVGPATAGSNFIAFNFNAADPVHRAW
FRNDNFRKAVAYAFDKQTIIDTLYNGLAVPCYGPRTNSSAFYNPEIEELGFRYSLVTAQRLLREAGFSWNEKGELVDWDG
NVVEFELNTNGENVMRNEISVILVDALGKLGIKVNYRPMQFNAVVQKMYSANWDAIIIGLVGGDDPGWGTNVWLLDGGLH
FWNWSPEVMEWVDPDEYWAHPAEQRIDEIMRVQRSILDKDELQELWDEWQMLVAENQILVYTISQNYLNMHKNTLHLYPV
EKYGTINPYGYSYSPGLWKIEYAWKEQ
>Mature_587_residues
MRKLLVLLVVALSALTIFAQEAYNPEWLIADVEGGQKGGTLYLATTSGPKTLNTYWAQETSSSIIINQGGVSLLSRDFYG
QPTQPSLAKDWGVERTADGGTLYWFEMREGVKWSDGHPLTVDDVVFTWEKIIVPDLTADGNDVYMDAEGNLPELTVEGNR
IMFKYPTVFRFGLETVGGFAIMPKHALEDKVTDAETFQSTWTVEQVDQIVVGGPFKVTEYTEGVRVVLERNPYYFEKSKD
GVQLPYLDRIVFEIVTDTNVERLRFEAGETDMHGPAAKDFPALRAQAEEKGWNVIVGPATAGSNFIAFNFNAADPVHRAW
FRNDNFRKAVAYAFDKQTIIDTLYNGLAVPCYGPRTNSSAFYNPEIEELGFRYSLVTAQRLLREAGFSWNEKGELVDWDG
NVVEFELNTNGENVMRNEISVILVDALGKLGIKVNYRPMQFNAVVQKMYSANWDAIIIGLVGGDDPGWGTNVWLLDGGLH
FWNWSPEVMEWVDPDEYWAHPAEQRIDEIMRVQRSILDKDELQELWDEWQMLVAENQILVYTISQNYLNMHKNTLHLYPV
EKYGTINPYGYSYSPGLWKIEYAWKEQ

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=386, Percent_Identity=24.0932642487047, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 66757; Mature: 66757

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLVLLVVALSALTIFAQEAYNPEWLIADVEGGQKGGTLYLATTSGPKTLNTYWAQET
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEHEEECCCC
SSSIIINQGGVSLLSRDFYGQPTQPSLAKDWGVERTADGGTLYWFEMREGVKWSDGHPLT
CCEEEEECCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
VDDVVFTWEKIIVPDLTADGNDVYMDAEGNLPELTVEGNRIMFKYPTVFRFGLETVGGFA
HHHHHHEEHHEEECCCCCCCCEEEEECCCCCCEEEECCCEEEEECCCCEEHHHHHCCCEE
IMPKHALEDKVTDAETFQSTWTVEQVDQIVVGGPFKVTEYTEGVRVVLERNPYYFEKSKD
ECCCHHHHCCCCCHHHHHHCCCHHHHCCEEECCCEEEEEECCCEEEEEECCCEEEECCCC
GVQLPYLDRIVFEIVTDTNVERLRFEAGETDMHGPAAKDFPALRAQAEEKGWNVIVGPAT
CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCC
AGSNFIAFNFNAADPVHRAWFRNDNFRKAVAYAFDKQTIIDTLYNGLAVPCYGPRTNSSA
CCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCCCC
FYNPEIEELGFRYSLVTAQRLLREAGFSWNEKGELVDWDGNVVEFELNTNGENVMRNEIS
EECCCHHHHCCEEHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCCCEECCCEE
VILVDALGKLGIKVNYRPMQFNAVVQKMYSANWDAIIIGLVGGDDPGWGTNVWLLDGGLH
EEEEECHHHCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCEE
FWNWSPEVMEWVDPDEYWAHPAEQRIDEIMRVQRSILDKDELQELWDEWQMLVAENQILV
EECCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCEEEE
YTISQNYLNMHKNTLHLYPVEKYGTINPYGYSYSPGLWKIEYAWKEQ
EEECCCHHHHCCCEEEEEEEHHCCCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MRKLLVLLVVALSALTIFAQEAYNPEWLIADVEGGQKGGTLYLATTSGPKTLNTYWAQET
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEHEEECCCC
SSSIIINQGGVSLLSRDFYGQPTQPSLAKDWGVERTADGGTLYWFEMREGVKWSDGHPLT
CCEEEEECCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
VDDVVFTWEKIIVPDLTADGNDVYMDAEGNLPELTVEGNRIMFKYPTVFRFGLETVGGFA
HHHHHHEEHHEEECCCCCCCCEEEEECCCCCCEEEECCCEEEEECCCCEEHHHHHCCCEE
IMPKHALEDKVTDAETFQSTWTVEQVDQIVVGGPFKVTEYTEGVRVVLERNPYYFEKSKD
ECCCHHHHCCCCCHHHHHHCCCHHHHCCEEECCCEEEEEECCCEEEEEECCCEEEECCCC
GVQLPYLDRIVFEIVTDTNVERLRFEAGETDMHGPAAKDFPALRAQAEEKGWNVIVGPAT
CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCC
AGSNFIAFNFNAADPVHRAWFRNDNFRKAVAYAFDKQTIIDTLYNGLAVPCYGPRTNSSA
CCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCCCC
FYNPEIEELGFRYSLVTAQRLLREAGFSWNEKGELVDWDGNVVEFELNTNGENVMRNEIS
EECCCHHHHCCEEHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCCCEECCCEE
VILVDALGKLGIKVNYRPMQFNAVVQKMYSANWDAIIIGLVGGDDPGWGTNVWLLDGGLH
EEEEECHHHCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCEE
FWNWSPEVMEWVDPDEYWAHPAEQRIDEIMRVQRSILDKDELQELWDEWQMLVAENQILV
EECCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCEEEE
YTISQNYLNMHKNTLHLYPVEKYGTINPYGYSYSPGLWKIEYAWKEQ
EEECCCHHHHCCCEEEEEEEHHCCCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]